-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_274

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 8098, 8692
Sorry, prediction GeneMark_model.107155_t fails validation.
(ATG)	 TG	5160-5165	GT	CTG
(GGT)	 AG	5190-5569	GT	GAG
(AGA)	 AG	5961-6170	GT	AGG
(AGA)	 AG	8098-8692	GC	GAG
-recovered GeneMark_model.107155_t, initial, 5160, 5165
-recovered GeneMark_model.107155_t, internal, 5190, 5569
-recovered GeneMark_model.107155_t, internal, 5961, 6170
-recovered GeneMark_model.107155_t, internal, 8098, 8692

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.107154_t
Valid prediction for Augustus_model.g40970.t1
Couldn't classify 1702, 1892
Sorry, prediction snap_scaffold_274-snap.1-T1 fails validation.
(AAC)	 AG	1702-1892	GT	AGG
-recovered snap_scaffold_274-snap.1-T1, internal, 1702, 1892
Valid prediction for GlimmerHMM_glimmerT_61619-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 8710
-exon list size: 20


building trellis

4.5    
9.1    
13.6    
18.2    
22.7    
27.3    
31.8    
36.4    
40.9    
45.5    
50.0    
54.5    
59.1    
63.6    
68.2    
72.7    
77.3    
81.8    
86.4    
90.9    
95.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support