-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_27/scaffold_27_8841519-9132827 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_27-snap.2078-T1 Valid prediction for GeneMark_model.103310_t Valid prediction for snap_scaffold_27-snap.2121-T1 Valid prediction for GeneMark_model.103300_t Valid prediction for snap_scaffold_27-snap.2120-T1 Valid prediction for Augustus_model.g39376.t1 Couldn't classify 151062, 151186 Sorry, prediction GeneMark_model.103261_t fails validation. (GTG) AG 151062-151186 GT TGG (GGG) AG 151227-151305 GT GGG (CAT) AG 152148-152185 GT GGG (GGG) AG 152209-152304 GT AAG (AGA) AG 152329-152358 GT TTG (GAT) AG 153313-153363 GT GCG (GAG) AG 153388-153483 GC GAG (GAG) AG 153506-153520 GT GAG (GAG) AG 153542-153607 GT CTG (AAA) AG 154471-154477 AA GAA -recovered GeneMark_model.103261_t, terminal, 154471, 154477 -recovered GeneMark_model.103261_t, internal, 151062, 151186 -recovered GeneMark_model.103261_t, internal, 151227, 151305 -recovered GeneMark_model.103261_t, internal, 152148, 152185 -recovered GeneMark_model.103261_t, internal, 152209, 152304 -recovered GeneMark_model.103261_t, internal, 152329, 152358 -recovered GeneMark_model.103261_t, internal, 153313, 153363 -recovered GeneMark_model.103261_t, internal, 153388, 153483 -recovered GeneMark_model.103261_t, internal, 153506, 153520 -recovered GeneMark_model.103261_t, internal, 153542, 153607 Valid prediction for snap_scaffold_27-snap.2131-T1 Valid prediction for snap_scaffold_27-snap.2102-T1 Valid prediction for GeneMark_model.103296_t Couldn't classify 77843, 79075 Sorry, prediction pasa_asmbl_36435.p1 fails validation. (ATG) TT 77843-79075 TA GGT Valid prediction for GeneMark_model.103236_t Valid prediction for GlimmerHMM_glimmerT_59172-T1 Valid prediction for GeneMark_model.103238_t Valid prediction for snap_scaffold_27-snap.2099-T1 Valid prediction for GeneMark_model.103265_t Valid prediction for GeneMark_model.103253_t Valid prediction for GeneMark_model.103279_t Valid prediction for GeneMark_model.103277_t Valid prediction for GeneMark_model.103308_t Valid prediction for snap_scaffold_27-snap.2085-T1 Valid prediction for snap_scaffold_27-snap.2083-T1 Valid prediction for GeneMark_model.103307_t Valid prediction for Augustus_model.g39389.t1 Valid prediction for GeneMark_model.103244_t Valid prediction for GeneMark_model.103228_t Valid prediction for GlimmerHMM_glimmerT_59171-T1 Valid prediction for Augustus_model.g39371.t1 Couldn't classify 84238, 84564 Sorry, prediction pasa_asmbl_36527.p1 fails validation. (CTC) CT 84238-84564 TT GAT Valid prediction for GeneMark_model.103290_t Valid prediction for GlimmerHMM_glimmerT_59156-T1 Valid prediction for snap_scaffold_27-snap.2129-T1 Valid prediction for snap_scaffold_27-snap.2084-T1 Valid prediction for GeneMark_model.103256_t Valid prediction for Augustus_model.g39372.t1 Valid prediction for Augustus_model.g39384.t1 Valid prediction for Augustus_model.g39382.t1 Valid prediction for GlimmerHMM_glimmerT_59173-T1 Valid prediction for Augustus_model.g39370.t1 Valid prediction for Augustus_model.g39390.t1 Valid prediction for GlimmerHMM_glimmerT_59175-T1 Valid prediction for GeneMark_model.103301_t Valid prediction for snap_scaffold_27-snap.2094-T1 Valid prediction for GlimmerHMM_glimmerT_59152-T1 Valid prediction for snap_scaffold_27-snap.2098-T1 Valid prediction for GeneMark_model.103270_t Valid prediction for GlimmerHMM_glimmerT_59183-T1 Valid prediction for GeneMark_model.103275_t Valid prediction for GlimmerHMM_glimmerT_59165-T1 Valid prediction for snap_scaffold_27-snap.2080-T1 Valid prediction for GeneMark_model.103291_t Valid prediction for GlimmerHMM_glimmerT_59158-T1 Valid prediction for snap_scaffold_27-snap.2135-T1 Valid prediction for GeneMark_model.103269_t Couldn't classify 93189, 93539 Sorry, prediction pasa_asmbl_36555.p1 fails validation. (GGT) CA 93189-93539 GT AGG Valid prediction for GlimmerHMM_glimmerT_59180-T1 Valid prediction for GeneMark_model.103227_t Valid prediction for GeneMark_model.103283_t Valid prediction for GeneMark_model.103292_t Valid prediction for GeneMark_model.103260_t Valid prediction for GeneMark_model.103248_t Valid prediction for Augustus_model.g39377.t1 Valid prediction for Augustus_model.g39385.t1 Valid prediction for Augustus_model.g39391.t1 Valid prediction for GeneMark_model.103246_t Valid prediction for snap_scaffold_27-snap.2133-T1 Valid prediction for GeneMark_model.103316_t Valid prediction for GlimmerHMM_glimmerT_59179-T1 Valid prediction for GlimmerHMM_glimmerT_59161-T1 Valid prediction for snap_scaffold_27-snap.2082-T1 Valid prediction for GeneMark_model.103312_t Valid prediction for GeneMark_model.103285_t Valid prediction for snap_scaffold_27-snap.2096-T1 Valid prediction for GeneMark_model.103251_t Valid prediction for snap_scaffold_27-snap.2112-T1 Valid prediction for snap_scaffold_27-snap.2106-T1 Valid prediction for snap_scaffold_27-snap.2114-T1 Valid prediction for Augustus_model.g39375.t1 Valid prediction for GeneMark_model.103230_t Valid prediction for GeneMark_model.103226_t Valid prediction for snap_scaffold_27-snap.2090-T1 Valid prediction for snap_scaffold_27-snap.2134-T1 Valid prediction for HiQ_model.g39392.t1 Valid prediction for GeneMark_model.103240_t Valid prediction for snap_scaffold_27-snap.2088-T1 Valid prediction for GlimmerHMM_glimmerT_59155-T1 Valid prediction for GeneMark_model.103294_t Valid prediction for GlimmerHMM_glimmerT_59182-T1 Valid prediction for GlimmerHMM_glimmerT_59184-T1 Valid prediction for GeneMark_model.103243_t Valid prediction for GeneMark_model.103315_t Valid prediction for GeneMark_model.103263_t Valid prediction for GeneMark_model.103281_t Valid prediction for GeneMark_model.103298_t Valid prediction for GlimmerHMM_glimmerT_59151-T1 Valid prediction for GlimmerHMM_glimmerT_59146-T1 Valid prediction for GlimmerHMM_glimmerT_59185-T1 Valid prediction for Augustus_model.g39383.t1 Valid prediction for GlimmerHMM_glimmerT_59157-T1 Valid prediction for snap_scaffold_27-snap.2077-T1 Valid prediction for Augustus_model.g39379.t1 Valid prediction for GlimmerHMM_glimmerT_59149-T1 Couldn't classify 274298, 274561 Couldn't classify 276285, 276464 Sorry, prediction pasa_asmbl_36523.p1 fails validation. (ACA) CA 274298-274561 GT AGG (ATG) AG 276068-276163 GT AGG (GCC) AG 276285-276464 TC GGT -recovered pasa_asmbl_36523.p1, initial, 276068, 276163 -recovered pasa_asmbl_36523.p1, internal, 276068, 276163 Valid prediction for GlimmerHMM_glimmerT_59168-T1 Valid prediction for GeneMark_model.103267_t Valid prediction for snap_scaffold_27-snap.2123-T1 Valid prediction for snap_scaffold_27-snap.2100-T1 Valid prediction for GeneMark_model.103303_t Couldn't classify 270774, 270910 Sorry, prediction pasa_asmbl_36458.p1 fails validation. (ATG) CC 256785-256832 GT CGG (CCT) AG 258235-258336 GT GTG (GCC) AG 258427-258550 GT AGG (CTC) AG 259053-259140 GT AGG (GGC) AG 260182-260344 GT AGG (TCC) AG 262073-262159 GT CTG (GAC) AG 262634-262771 GT AGG (GAT) AG 263326-263396 GT AAG (GAA) AG 263604-263680 GT TGG (GTA) AG 263967-264115 GT AGG (AGA) AG 264213-264340 GT AGG (GTA) AG 264463-264558 GT TGG (CTA) AG 265139-265327 GT ACG (CCA) AG 266100-266302 GT CGG (AAC) AG 266608-266678 GT AGG (GTG) AG 268071-268299 GT AGG (AGG) AG 268996-269289 GT AGG (GAC) AG 270774-270910 TC CCT -recovered pasa_asmbl_36458.p1, initial, 256785, 256832 -recovered pasa_asmbl_36458.p1, internal, 258235, 258336 -recovered pasa_asmbl_36458.p1, internal, 258427, 258550 -recovered pasa_asmbl_36458.p1, internal, 259053, 259140 -recovered pasa_asmbl_36458.p1, internal, 260182, 260344 -recovered pasa_asmbl_36458.p1, internal, 262073, 262159 -recovered pasa_asmbl_36458.p1, internal, 262634, 262771 -recovered pasa_asmbl_36458.p1, internal, 263326, 263396 -recovered pasa_asmbl_36458.p1, internal, 263604, 263680 -recovered pasa_asmbl_36458.p1, internal, 263967, 264115 -recovered pasa_asmbl_36458.p1, internal, 264213, 264340 -recovered pasa_asmbl_36458.p1, internal, 264463, 264558 -recovered pasa_asmbl_36458.p1, internal, 265139, 265327 -recovered pasa_asmbl_36458.p1, internal, 266100, 266302 -recovered pasa_asmbl_36458.p1, internal, 266608, 266678 -recovered pasa_asmbl_36458.p1, internal, 268071, 268299 -recovered pasa_asmbl_36458.p1, internal, 268996, 269289 Valid prediction for GlimmerHMM_glimmerT_59147-T1 Valid prediction for GeneMark_model.103241_t Couldn't classify 290952, 291120 Sorry, prediction pasa_asmbl_36464.p1 fails validation. (ATG) GA 285599-285703 GT AGG (GAA) AG 286205-286339 GT AGG (GTA) AG 286477-286578 GT AGG (TTT) AG 286908-286985 GT AGG (GAA) AG 287067-287226 GT AGG (ATC) AG 287745-287897 GT CAG (GCC) AG 288463-288657 GT AGG (ATG) AG 288925-289061 GT AGG (GTG) AG 289505-289687 GT AAG (ATC) AG 289907-290142 GT TGG (TGC) AG 290611-290682 GT AAG (GGA) AG 290952-291120 CA TGC -recovered pasa_asmbl_36464.p1, initial, 285599, 285703 -recovered pasa_asmbl_36464.p1, initial, 288925, 289061 add_exon() Sorry, pasa_asmbl_36464.p1 288463-288657-terminal-1 is invalid. -recovered pasa_asmbl_36464.p1, terminal, 288463, 288657 -recovered pasa_asmbl_36464.p1, internal, 286205, 286339 -recovered pasa_asmbl_36464.p1, internal, 286477, 286578 -recovered pasa_asmbl_36464.p1, internal, 286908, 286985 -recovered pasa_asmbl_36464.p1, internal, 287067, 287226 -recovered pasa_asmbl_36464.p1, internal, 287745, 287897 -recovered pasa_asmbl_36464.p1, internal, 288463, 288657 -recovered pasa_asmbl_36464.p1, internal, 288925, 289061 -recovered pasa_asmbl_36464.p1, internal, 289505, 289687 -recovered pasa_asmbl_36464.p1, internal, 289907, 290142 -recovered pasa_asmbl_36464.p1, internal, 290611, 290682 Valid prediction for snap_scaffold_27-snap.2110-T1 Valid prediction for GlimmerHMM_glimmerT_59154-T1 Valid prediction for GeneMark_model.103250_t Valid prediction for CodingQuarry_transcript_41875-T1 Couldn't classify 277679, 277758 Sorry, prediction pasa_asmbl_36462.p1 fails validation. (CAG) AG 277679-277758 GT AAG (GCC) AG 278301-278424 GT AAG (GAG) AG 278734-278929 GT TGG (ACT) AG 279181-279353 GG AAG -recovered pasa_asmbl_36462.p1, terminal, 279181, 279353 -recovered pasa_asmbl_36462.p1, internal, 277679, 277758 -recovered pasa_asmbl_36462.p1, internal, 278301, 278424 -recovered pasa_asmbl_36462.p1, internal, 278734, 278929 Valid prediction for Augustus_model.g39374.t1 Valid prediction for Augustus_model.g39378.t1 Valid prediction for GeneMark_model.103234_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g39380.t1 Valid prediction for snap_scaffold_27-snap.2079-T1 Valid prediction for snap_scaffold_27-snap.2105-T1 Valid prediction for GeneMark_model.103305_t Valid prediction for GeneMark_model.103289_t Valid prediction for GeneMark_model.103257_t Couldn't classify 40898, 41015 Sorry, prediction pasa_asmbl_37076.p1 fails validation. (GTG) AG 40898-41015 GT GGG (GGT) AG 41284-41549 AC GAA -recovered pasa_asmbl_37076.p1, terminal, 41284, 41549 -recovered pasa_asmbl_37076.p1, internal, 40898, 41015 Couldn't classify 40806, 40822 Sorry, prediction pasa_asmbl_37078.p1 fails validation. (ATG) TC 35882-36031 GT TGG (GAC) AG 36276-36320 GT AGG (ATA) AG 36831-36940 GT TTG (CGT) AG 37798-37967 GT AGG (TGA) AG 38129-38286 GT ACG (GTG) AG 40075-40285 GT AAG (GTG) AG 40806-40822 TG TAT -recovered pasa_asmbl_37078.p1, initial, 35882, 36031 add_exon() Sorry, pasa_asmbl_37078.p1 40075-40285-terminal-3 is invalid. -recovered pasa_asmbl_37078.p1, terminal, 40075, 40285 -recovered pasa_asmbl_37078.p1, internal, 36276, 36320 -recovered pasa_asmbl_37078.p1, internal, 36831, 36940 -recovered pasa_asmbl_37078.p1, internal, 37798, 37967 -recovered pasa_asmbl_37078.p1, internal, 38129, 38286 -recovered pasa_asmbl_37078.p1, internal, 40075, 40285 Valid prediction for GlimmerHMM_glimmerT_59159-T1 Valid prediction for GeneMark_model.103237_t Valid prediction for GlimmerHMM_glimmerT_59177-T1 Valid prediction for GeneMark_model.103271_t Valid prediction for snap_scaffold_27-snap.2127-T1 Valid prediction for GeneMark_model.103245_t Valid prediction for GeneMark_model.103304_t Valid prediction for snap_scaffold_27-snap.2126-T1 Valid prediction for GeneMark_model.103280_t Valid prediction for GeneMark_model.103313_t Valid prediction for GlimmerHMM_glimmerT_59178-T1 Valid prediction for snap_scaffold_27-snap.2108-T1 Valid prediction for GeneMark_model.103239_t Valid prediction for Augustus_model.g39373.t1 Valid prediction for GlimmerHMM_glimmerT_59163-T1 Valid prediction for GeneMark_model.103297_t Valid prediction for snap_scaffold_27-snap.2111-T1 Valid prediction for snap_scaffold_27-snap.2116-T1 Valid prediction for snap_scaffold_27-snap.2089-T1 Valid prediction for GeneMark_model.103247_t Valid prediction for GeneMark_model.103258_t Valid prediction for GeneMark_model.103278_t Valid prediction for GeneMark_model.103254_t Valid prediction for GeneMark_model.103274_t Valid prediction for snap_scaffold_27-snap.2113-T1 Valid prediction for GlimmerHMM_glimmerT_59181-T1 Valid prediction for GeneMark_model.103317_t Valid prediction for snap_scaffold_27-snap.2095-T1 Valid prediction for GeneMark_model.103314_t Valid prediction for Augustus_model.g39386.t1 Valid prediction for GeneMark_model.103255_t Valid prediction for HiQ_model.g39388.t1 Valid prediction for snap_scaffold_27-snap.2117-T1 Valid prediction for GlimmerHMM_glimmerT_59148-T1 Valid prediction for GeneMark_model.103295_t Valid prediction for GeneMark_model.103302_t Valid prediction for GlimmerHMM_glimmerT_59164-T1 Valid prediction for GeneMark_model.103282_t Valid prediction for GeneMark_model.103232_t Valid prediction for GlimmerHMM_glimmerT_59170-T1 Valid prediction for GeneMark_model.103309_t Valid prediction for GlimmerHMM_glimmerT_59162-T1 Valid prediction for snap_scaffold_27-snap.2103-T1 Valid prediction for snap_scaffold_27-snap.2130-T1 Valid prediction for snap_scaffold_27-snap.2118-T1 Valid prediction for GeneMark_model.103266_t Valid prediction for Augustus_model.g39387.t1 Valid prediction for GlimmerHMM_glimmerT_59176-T1 Valid prediction for GlimmerHMM_glimmerT_59153-T1 Valid prediction for snap_scaffold_27-snap.2093-T1 Valid prediction for GlimmerHMM_glimmerT_59160-T1 Valid prediction for snap_scaffold_27-snap.2092-T1 Valid prediction for GeneMark_model.103311_t Valid prediction for CodingQuarry_transcript_41873-T1 Valid prediction for GeneMark_model.103249_t Valid prediction for GeneMark_model.103264_t Valid prediction for snap_scaffold_27-snap.2086-T1 Valid prediction for snap_scaffold_27-snap.2115-T1 Valid prediction for snap_scaffold_27-snap.2097-T1 Valid prediction for snap_scaffold_27-snap.2107-T1 Valid prediction for snap_scaffold_27-snap.2132-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for snap_scaffold_27-snap.2081-T1 Valid prediction for GlimmerHMM_glimmerT_59167-T1 Valid prediction for GeneMark_model.103229_t Valid prediction for GeneMark_model.103252_t Valid prediction for snap_scaffold_27-snap.2087-T1 Valid prediction for GlimmerHMM_glimmerT_59169-T1 Valid prediction for GeneMark_model.103233_t Valid prediction for Augustus_model.g39381.t1 Valid prediction for GeneMark_model.103272_t Valid prediction for GeneMark_model.103286_t Valid prediction for snap_scaffold_27-snap.2124-T1 Valid prediction for GeneMark_model.103259_t Valid prediction for GeneMark_model.103268_t Valid prediction for GeneMark_model.103284_t Valid prediction for snap_scaffold_27-snap.2104-T1 Valid prediction for GeneMark_model.103306_t Valid prediction for snap_scaffold_27-snap.2125-T1 Valid prediction for snap_scaffold_27-snap.2109-T1 Valid prediction for GeneMark_model.103262_t Valid prediction for GeneMark_model.103276_t Valid prediction for snap_scaffold_27-snap.2119-T1 Valid prediction for snap_scaffold_27-snap.2091-T1 Valid prediction for GeneMark_model.103287_t Valid prediction for GlimmerHMM_glimmerT_59174-T1 Valid prediction for GeneMark_model.103293_t Valid prediction for GlimmerHMM_glimmerT_59166-T1 Valid prediction for snap_scaffold_27-snap.2128-T1 Valid prediction for GeneMark_model.103273_t Valid prediction for snap_scaffold_27-snap.2122-T1 Valid prediction for GeneMark_model.103235_t Valid prediction for GeneMark_model.103288_t Valid prediction for GeneMark_model.103242_t Valid prediction for snap_scaffold_27-snap.2101-T1 Valid prediction for GeneMark_model.103231_t Valid prediction for GlimmerHMM_glimmerT_59150-T1 Valid prediction for GeneMark_model.103299_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7094, rend_intergenic: 5661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 8260, rend_intergenic: 7460 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13783, rend_intergenic: 10446 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29656, rend_intergenic: 23436 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 58793, rend_intergenic: 48637 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 81345, rend_intergenic: 77873 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86444, rend_intergenic: 81863 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105189, rend_intergenic: 87929 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111724, rend_intergenic: 106275 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118339, rend_intergenic: 111778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135350, rend_intergenic: 119138 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153625, rend_intergenic: 139934 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158169, rend_intergenic: 154925 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175449, rend_intergenic: 158239 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179763, rend_intergenic: 175556 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199807, rend_intergenic: 180108 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 230649, rend_intergenic: 200721 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241533, rend_intergenic: 237332 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 260340, rend_intergenic: 257260 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276523, rend_intergenic: 261632 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276883, rend_intergenic: 276536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281155, rend_intergenic: 276939 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 291309 -exon list size: 1282 building trellis 0.1 0.2 0.2 0.3 0.4 0.5 0.5 0.6 0.7 0.8 0.9 0.9 1.0 1.1 1.2 1.2 1.3 1.4 1.5 1.6 1.6 1.7 1.8 1.9 1.9 2.0 2.1 2.2 2.3 2.3 2.4 2.5 2.6 2.6 2.7 2.8 2.9 3.0 3.0 3.1 3.2 3.3 3.3 3.4 3.5 3.6 3.7 3.7 3.8 3.9 4.0 4.0 4.1 4.2 4.3 4.4 4.4 4.5 4.6 4.7 4.8 4.8 4.9 5.0 5.1 5.1 5.2 5.3 5.4 5.5 5.5 5.6 5.7 5.8 5.8 5.9 6.0 6.1 6.2 6.2 6.3 6.4 6.5 6.5 6.6 6.7 6.8 6.9 6.9 7.0 7.1 7.2 7.2 7.3 7.4 7.5 7.6 7.6 7.7 7.8 7.9 7.9 8.0 8.1 8.2 8.3 8.3 8.4 8.5 8.6 8.6 8.7 8.8 8.9 9.0 9.0 9.1 9.2 9.3 9.3 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.0 10.1 10.2 10.3 10.4 10.4 10.5 10.6 10.7 10.7 10.8 10.9 11.0 11.1 11.1 11.2 11.3 11.4 11.4 11.5 11.6 11.7 11.8 11.8 11.9 12.0 12.1 12.1 12.2 12.3 12.4 12.5 12.5 12.6 12.7 12.8 12.9 12.9 13.0 13.1 13.2 13.2 13.3 13.4 13.5 13.6 13.6 13.7 13.8 13.9 13.9 14.0 14.1 14.2 14.3 14.3 14.4 14.5 14.6 14.6 14.7 14.8 14.9 15.0 15.0 15.1 15.2 15.3 15.3 15.4 15.5 15.6 15.7 15.7 15.8 15.9 16.0 16.0 16.1 16.2 16.3 16.4 16.4 16.5 16.6 16.7 16.7 16.8 16.9 17.0 17.1 17.1 17.2 17.3 17.4 17.4 17.5 17.6 17.7 17.8 17.8 17.9 18.0 18.1 18.1 18.2 18.3 18.4 18.5 18.5 18.6 18.7 18.8 18.8 18.9 19.0 19.1 19.2 19.2 19.3 19.4 19.5 19.5 19.6 19.7 19.8 19.9 19.9 20.0 20.1 20.2 20.2 20.3 20.4 20.5 20.6 20.6 20.7 20.8 20.9 21.0 21.0 21.1 21.2 21.3 21.3 21.4 21.5 21.6 21.7 21.7 21.8 21.9 22.0 22.0 22.1 22.2 22.3 22.4 22.4 22.5 22.6 22.7 22.7 22.8 22.9 23.0 23.1 23.1 23.2 23.3 23.4 23.4 23.5 23.6 23.7 23.8 23.8 23.9 24.0 24.1 24.1 24.2 24.3 24.4 24.5 24.5 24.6 24.7 24.8 24.8 24.9 25.0 25.1 25.2 25.2 25.3 25.4 25.5 25.5 25.6 25.7 25.8 25.9 25.9 26.0 26.1 26.2 26.2 26.3 26.4 26.5 26.6 26.6 26.7 26.8 26.9 26.9 27.0 27.1 27.2 27.3 27.3 27.4 27.5 27.6 27.6 27.7 27.8 27.9 28.0 28.0 28.1 28.2 28.3 28.3 28.4 28.5 28.6 28.7 28.7 28.8 28.9 29.0 29.0 29.1 29.2 29.3 29.4 29.4 29.5 29.6 29.7 29.8 29.8 29.9 30.0 30.1 30.1 30.2 30.3 30.4 30.5 30.5 30.6 30.7 30.8 30.8 30.9 31.0 31.1 31.2 31.2 31.3 31.4 31.5 31.5 31.6 31.7 31.8 31.9 31.9 32.0 32.1 32.2 32.2 32.3 32.4 32.5 32.6 32.6 32.7 32.8 32.9 32.9 33.0 33.1 33.2 33.3 33.3 33.4 33.5 33.6 33.6 33.7 33.8 33.9 34.0 34.0 34.1 34.2 34.3 34.3 34.4 34.5 34.6 34.7 34.7 34.8 34.9 35.0 35.0 35.1 35.2 35.3 35.4 35.4 35.5 35.6 35.7 35.7 35.8 35.9 36.0 36.1 36.1 36.2 36.3 36.4 36.4 36.5 36.6 36.7 36.8 36.8 36.9 37.0 37.1 37.1 37.2 37.3 37.4 37.5 37.5 37.6 37.7 37.8 37.9 37.9 38.0 38.1 38.2 38.2 38.3 38.4 38.5 38.6 38.6 38.7 38.8 38.9 38.9 39.0 39.1 39.2 39.3 39.3 39.4 39.5 39.6 39.6 39.7 39.8 39.9 40.0 40.0 40.1 40.2 40.3 40.3 40.4 40.5 40.6 40.7 40.7 40.8 40.9 41.0 41.0 41.1 41.2 41.3 41.4 41.4 41.5 41.6 41.7 41.7 41.8 41.9 42.0 42.1 42.1 42.2 42.3 42.4 42.4 42.5 42.6 42.7 42.8 42.8 42.9 43.0 43.1 43.1 43.2 43.3 43.4 43.5 43.5 43.6 43.7 43.8 43.8 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.5 44.6 44.7 44.8 44.9 44.9 45.0 45.1 45.2 45.2 45.3 45.4 45.5 45.6 45.6 45.7 45.8 45.9 46.0 46.0 46.1 46.2 46.3 46.3 46.4 46.5 46.6 46.7 46.7 46.8 46.9 47.0 47.0 47.1 47.2 47.3 47.4 47.4 47.5 47.6 47.7 47.7 47.8 47.9 48.0 48.1 48.1 48.2 48.3 48.4 48.4 48.5 48.6 48.7 48.8 48.8 48.9 49.0 49.1 49.1 49.2 49.3 49.4 49.5 49.5 49.6 49.7 49.8 49.8 49.9 50.0 50.1 50.2 50.2 50.3 50.4 50.5 50.5 50.6 50.7 50.8 50.9 50.9 51.0 51.1 51.2 51.2 51.3 51.4 51.5 51.6 51.6 51.7 51.8 51.9 51.9 52.0 52.1 52.2 52.3 52.3 52.4 52.5 52.6 52.6 52.7 52.8 52.9 53.0 53.0 53.1 53.2 53.3 53.3 53.4 53.5 53.6 53.7 53.7 53.8 53.9 54.0 54.0 54.1 54.2 54.3 54.4 54.4 54.5 54.6 54.7 54.8 54.8 54.9 55.0 55.1 55.1 55.2 55.3 55.4 55.5 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.2 56.2 56.3 56.4 56.5 56.5 56.6 56.7 56.8 56.9 56.9 57.0 57.1 57.2 57.2 57.3 57.4 57.5 57.6 57.6 57.7 57.8 57.9 57.9 58.0 58.1 58.2 58.3 58.3 58.4 58.5 58.6 58.6 58.7 58.8 58.9 59.0 59.0 59.1 59.2 59.3 59.3 59.4 59.5 59.6 59.7 59.7 59.8 59.9 60.0 60.0 60.1 60.2 60.3 60.4 60.4 60.5 60.6 60.7 60.7 60.8 60.9 61.0 61.1 61.1 61.2 61.3 61.4 61.4 61.5 61.6 61.7 61.8 61.8 61.9 62.0 62.1 62.1 62.2 62.3 62.4 62.5 62.5 62.6 62.7 62.8 62.9 62.9 63.0 63.1 63.2 63.2 63.3 63.4 63.5 63.6 63.6 63.7 63.8 63.9 63.9 64.0 64.1 64.2 64.3 64.3 64.4 64.5 64.6 64.6 64.7 64.8 64.9 65.0 65.0 65.1 65.2 65.3 65.3 65.4 65.5 65.6 65.7 65.7 65.8 65.9 66.0 66.0 66.1 66.2 66.3 66.4 66.4 66.5 66.6 66.7 66.7 66.8 66.9 67.0 67.1 67.1 67.2 67.3 67.4 67.4 67.5 67.6 67.7 67.8 67.8 67.9 68.0 68.1 68.1 68.2 68.3 68.4 68.5 68.5 68.6 68.7 68.8 68.8 68.9 69.0 69.1 69.2 69.2 69.3 69.4 69.5 69.5 69.6 69.7 69.8 69.9 69.9 70.0 70.1 70.2 70.2 70.3 70.4 70.5 70.6 70.6 70.7 70.8 70.9 71.0 71.0 71.1 71.2 71.3 71.3 71.4 71.5 71.6 71.7 71.7 71.8 71.9 72.0 72.0 72.1 72.2 72.3 72.4 72.4 72.5 72.6 72.7 72.7 72.8 72.9 73.0 73.1 73.1 73.2 73.3 73.4 73.4 73.5 73.6 73.7 73.8 73.8 73.9 74.0 74.1 74.1 74.2 74.3 74.4 74.5 74.5 74.6 74.7 74.8 74.8 74.9 75.0 75.1 75.2 75.2 75.3 75.4 75.5 75.5 75.6 75.7 75.8 75.9 75.9 76.0 76.1 76.2 76.2 76.3 76.4 76.5 76.6 76.6 76.7 76.8 76.9 76.9 77.0 77.1 77.2 77.3 77.3 77.4 77.5 77.6 77.6 77.7 77.8 77.9 78.0 78.0 78.1 78.2 78.3 78.3 78.4 78.5 78.6 78.7 78.7 78.8 78.9 79.0 79.0 79.1 79.2 79.3 79.4 79.4 79.5 79.6 79.7 79.8 79.8 79.9 80.0 80.1 80.1 80.2 80.3 80.4 80.5 80.5 80.6 80.7 80.8 80.8 80.9 81.0 81.1 81.2 81.2 81.3 81.4 81.5 81.5 81.6 81.7 81.8 81.9 81.9 82.0 82.1 82.2 82.2 82.3 82.4 82.5 82.6 82.6 82.7 82.8 82.9 82.9 83.0 83.1 83.2 83.3 83.3 83.4 83.5 83.6 83.6 83.7 83.8 83.9 84.0 84.0 84.1 84.2 84.3 84.3 84.4 84.5 84.6 84.7 84.7 84.8 84.9 85.0 85.0 85.1 85.2 85.3 85.4 85.4 85.5 85.6 85.7 85.7 85.8 85.9 86.0 86.1 86.1 86.2 86.3 86.4 86.4 86.5 86.6 86.7 86.8 86.8 86.9 87.0 87.1 87.1 87.2 87.3 87.4 87.5 87.5 87.6 87.7 87.8 87.9 87.9 88.0 88.1 88.2 88.2 88.3 88.4 88.5 88.6 88.6 88.7 88.8 88.9 88.9 89.0 89.1 89.2 89.3 89.3 89.4 89.5 89.6 89.6 89.7 89.8 89.9 90.0 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.7 90.7 90.8 90.9 91.0 91.0 91.1 91.2 91.3 91.4 91.4 91.5 91.6 91.7 91.7 91.8 91.9 92.0 92.1 92.1 92.2 92.3 92.4 92.4 92.5 92.6 92.7 92.8 92.8 92.9 93.0 93.1 93.1 93.2 93.3 93.4 93.5 93.5 93.6 93.7 93.8 93.8 93.9 94.0 94.1 94.2 94.2 94.3 94.4 94.5 94.5 94.6 94.7 94.8 94.9 94.9 95.0 95.1 95.2 95.2 95.3 95.4 95.5 95.6 95.6 95.7 95.8 95.9 96.0 96.0 96.1 96.2 96.3 96.3 96.4 96.5 96.6 96.7 96.7 96.8 96.9 97.0 97.0 97.1 97.2 97.3 97.4 97.4 97.5 97.6 97.7 97.7 97.8 97.9 98.0 98.1 98.1 98.2 98.3 98.4 98.4 98.5 98.6 98.7 98.8 98.8 98.9 99.0 99.1 99.1 99.2 99.3 99.4 99.5 99.5 99.6 99.7 99.8 99.8 99.9 -found 72 predictions from path traversal Error with prediction: snap lend_intergenic: 7094, rend_intergenic: 5661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 8260, rend_intergenic: 7460 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13783, rend_intergenic: 10446 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29656, rend_intergenic: 23436 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 58793, rend_intergenic: 48637 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 81345, rend_intergenic: 77873 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86444, rend_intergenic: 81863 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105189, rend_intergenic: 87929 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111724, rend_intergenic: 106275 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118339, rend_intergenic: 111778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135350, rend_intergenic: 119138 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153625, rend_intergenic: 139934 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158169, rend_intergenic: 154925 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175449, rend_intergenic: 158239 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179763, rend_intergenic: 175556 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199807, rend_intergenic: 180108 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 230649, rend_intergenic: 200721 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241533, rend_intergenic: 237332 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 260340, rend_intergenic: 257260 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276523, rend_intergenic: 261632 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276883, rend_intergenic: 276536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281155, rend_intergenic: 276939 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 27 predictions persist after filtering for low support