-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_27/scaffold_27_6532221-6741378 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.102610_t Valid prediction for snap_scaffold_27-snap.1577-T1 Valid prediction for GeneMark_model.102604_t Valid prediction for GlimmerHMM_glimmerT_58855-T1 Valid prediction for GeneMark_model.102567_t Valid prediction for GeneMark_model.102595_t Valid prediction for GeneMark_model.102579_t Valid prediction for snap_scaffold_27-snap.1574-T1 Valid prediction for snap_scaffold_27-snap.1600-T1 Valid prediction for snap_scaffold_27-snap.1583-T1 Valid prediction for snap_scaffold_27-snap.1580-T1 Valid prediction for GeneMark_model.102558_t Valid prediction for GeneMark_model.102584_t Valid prediction for GeneMark_model.102591_t Valid prediction for GeneMark_model.102577_t Valid prediction for snap_scaffold_27-snap.1576-T1 Valid prediction for GeneMark_model.102573_t Valid prediction for GeneMark_model.102588_t Valid prediction for GlimmerHMM_glimmerT_58863-T1 Valid prediction for Augustus_model.g39221.t1 Valid prediction for pasa_asmbl_36358.p2 Couldn't classify 180040, 180198 Sorry, prediction pasa_asmbl_36530.p1 fails validation. (ATG) CA 179779-179940 GT AGG (GTG) AG 180040-180198 AG ACA -recovered pasa_asmbl_36530.p1, initial, 179779, 179940 Valid prediction for GeneMark_model.102603_t Valid prediction for snap_scaffold_27-snap.1606-T1 Valid prediction for snap_scaffold_27-snap.1593-T1 Valid prediction for GeneMark_model.102586_t Valid prediction for GeneMark_model.102560_t Valid prediction for Augustus_model.g39224.t1 Valid prediction for Augustus_model.g39217.t1 Valid prediction for GeneMark_model.102611_t Valid prediction for CodingQuarry_transcript_41833-T1 Valid prediction for Augustus_model.g39213.t1 Valid prediction for snap_scaffold_27-snap.1601-T1 Valid prediction for GeneMark_model.102571_t Valid prediction for GeneMark_model.102589_t Valid prediction for GlimmerHMM_glimmerT_58876-T1 Valid prediction for snap_scaffold_27-snap.1592-T1 Valid prediction for GeneMark_model.102607_t Valid prediction for GlimmerHMM_glimmerT_58874-T1 Valid prediction for GeneMark_model.102600_t Valid prediction for GlimmerHMM_glimmerT_58875-T1 Valid prediction for GlimmerHMM_glimmerT_58869-T1 Valid prediction for GeneMark_model.102593_t Couldn't classify 180712, 180777 Couldn't classify 184609, 184625 Sorry, prediction pasa_asmbl_36361.p1 fails validation. (GGG) GG 180712-180777 GT AGG (GGG) AG 181176-181306 GT TGG (GGA) AG 181448-181553 GT AGG (GGG) AG 183324-183482 GT TGG (GCT) AG 184065-184191 GT TGG (GTG) AG 184305-184439 GT AGG (CCG) AG 184609-184625 CT AGC -recovered pasa_asmbl_36361.p1, internal, 181176, 181306 -recovered pasa_asmbl_36361.p1, internal, 181448, 181553 -recovered pasa_asmbl_36361.p1, internal, 183324, 183482 -recovered pasa_asmbl_36361.p1, internal, 184065, 184191 -recovered pasa_asmbl_36361.p1, internal, 184305, 184439 Valid prediction for GeneMark_model.102553_t Valid prediction for GeneMark_model.102597_t Valid prediction for GeneMark_model.102581_t Valid prediction for GeneMark_model.102583_t Valid prediction for snap_scaffold_27-snap.1588-T1 Valid prediction for GlimmerHMM_glimmerT_58861-T1 Valid prediction for GeneMark_model.102562_t Valid prediction for GlimmerHMM_glimmerT_58867-T1 Valid prediction for CodingQuarry_transcript_41830-T1 Valid prediction for GeneMark_model.102608_t Valid prediction for Augustus_model.g39209.t1 Valid prediction for GeneMark_model.102569_t Valid prediction for CodingQuarry_transcript_41834-T1 Valid prediction for snap_scaffold_27-snap.1579-T1 Valid prediction for snap_scaffold_27-snap.1575-T1 Valid prediction for GeneMark_model.102606_t Valid prediction for snap_scaffold_27-snap.1587-T1 Valid prediction for GeneMark_model.102563_t Valid prediction for GeneMark_model.102556_t Valid prediction for GlimmerHMM_glimmerT_58871-T1 Valid prediction for GeneMark_model.102564_t Valid prediction for GlimmerHMM_glimmerT_58860-T1 Valid prediction for snap_scaffold_27-snap.1597-T1 Valid prediction for snap_scaffold_27-snap.1584-T1 Valid prediction for Augustus_model.g39225.t1 Valid prediction for snap_scaffold_27-snap.1595-T1 Valid prediction for snap_scaffold_27-snap.1570-T1 Valid prediction for snap_scaffold_27-snap.1585-T1 Valid prediction for GlimmerHMM_glimmerT_58877-T1 Valid prediction for GeneMark_model.102565_t Valid prediction for snap_scaffold_27-snap.1596-T1 Valid prediction for snap_scaffold_27-snap.1594-T1 Valid prediction for snap_scaffold_27-snap.1590-T1 Valid prediction for Augustus_model.g39214.t1 Valid prediction for snap_scaffold_27-snap.1581-T1 Valid prediction for GeneMark_model.102575_t Valid prediction for snap_scaffold_27-snap.1572-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g39220.t1 Couldn't classify 169659, 169689 Couldn't classify 172121, 172234 Sorry, prediction pasa_asmbl_37179.p1 fails validation. (AAC) TG 169659-169689 GT CGG (AGT) AG 169870-170015 GT GGG (TGG) AG 170436-170587 GT AGG (GTT) AG 171127-171240 GT AAG (GGC) AG 171464-171545 GT AGG (TCG) AG 171655-171703 GT GCG (GCA) AG 171880-172019 GT TGG (AGA) AG 172121-172234 AG TCA -recovered pasa_asmbl_37179.p1, internal, 169870, 170015 -recovered pasa_asmbl_37179.p1, internal, 170436, 170587 -recovered pasa_asmbl_37179.p1, internal, 171127, 171240 -recovered pasa_asmbl_37179.p1, internal, 171464, 171545 -recovered pasa_asmbl_37179.p1, internal, 171655, 171703 -recovered pasa_asmbl_37179.p1, internal, 171880, 172019 Valid prediction for Augustus_model.g39212.t1 Valid prediction for snap_scaffold_27-snap.1589-T1 Valid prediction for GlimmerHMM_glimmerT_58865-T1 Valid prediction for GlimmerHMM_glimmerT_58870-T1 Valid prediction for snap_scaffold_27-snap.1598-T1 Valid prediction for GeneMark_model.102587_t Valid prediction for GeneMark_model.102580_t Valid prediction for GeneMark_model.102609_t Valid prediction for GlimmerHMM_glimmerT_58873-T1 Valid prediction for GeneMark_model.102561_t Valid prediction for snap_scaffold_27-snap.1604-T1 Couldn't classify 147536, 147733 Sorry, prediction pasa_asmbl_37018.p1 fails validation. (CAG) CG 147536-147733 GT TGG (ACA) AG 148030-148167 GT AGG (TCC) AG 148383-148580 GA AAG -recovered pasa_asmbl_37018.p1, terminal, 148383, 148580 -recovered pasa_asmbl_37018.p1, internal, 148030, 148167 Valid prediction for HiQ_model.g39216.t1 Valid prediction for Augustus_model.g39210.t1 Couldn't classify 165893, 165922 Couldn't classify 168452, 168517 Sorry, prediction pasa_asmbl_37016.p1 fails validation. (TCC) TC 165893-165922 GT AGG (ATG) AG 166075-166278 GT AGG (GAC) AG 166470-166556 GT AGG (AAC) AG 166832-166929 GT AAG (CAA) AG 167970-168096 GT AGG (AAC) AG 168452-168517 CC AAC -recovered pasa_asmbl_37016.p1, initial, 166075, 166278 -recovered pasa_asmbl_37016.p1, internal, 166075, 166278 -recovered pasa_asmbl_37016.p1, internal, 166470, 166556 -recovered pasa_asmbl_37016.p1, internal, 166832, 166929 -recovered pasa_asmbl_37016.p1, internal, 167970, 168096 Valid prediction for Augustus_model.g39219.t1 Valid prediction for GeneMark_model.102574_t Valid prediction for GlimmerHMM_glimmerT_58856-T1 Valid prediction for GlimmerHMM_glimmerT_58857-T1 Valid prediction for snap_scaffold_27-snap.1591-T1 Valid prediction for GeneMark_model.102557_t Valid prediction for GeneMark_model.102576_t Valid prediction for snap_scaffold_27-snap.1603-T1 Couldn't classify 174963, 175107 Couldn't classify 177813, 177956 Sorry, prediction pasa_asmbl_37014.p1 fails validation. (TTG) GC 174963-175107 GT CGG (AGA) AG 175412-175526 GT GAG (ATC) AG 175795-175927 GC AGG (AAG) AG 176071-176190 GT AGG (AAC) AG 176402-176464 GT AGG (CCC) AG 177813-177956 AG CCA -recovered pasa_asmbl_37014.p1, internal, 175412, 175526 -recovered pasa_asmbl_37014.p1, internal, 175795, 175927 -recovered pasa_asmbl_37014.p1, internal, 176071, 176190 -recovered pasa_asmbl_37014.p1, internal, 176402, 176464 Couldn't classify 133680, 133715 Couldn't classify 146769, 146939 Sorry, prediction pasa_asmbl_37019.p1 fails validation. (AGA) GC 133680-133715 GT AGG (GTG) AG 133946-134117 GT TGG (AGG) AG 134463-134719 GT AGG (TAC) AG 135185-135331 GT ATG (ATC) AG 135761-135929 GT GGG (GCA) AG 136148-136238 GT AGG (GGC) AG 136336-136406 GT GAG (GCG) AG 137413-137563 GT AGG (GTG) AG 138420-138523 GT GGG (GTC) AG 139689-139780 GT AGG (GTC) AG 139871-139964 GT AGG (GTG) AG 140406-140625 GT AGG (AGC) AG 141072-141193 GT AGG (ACT) AG 141557-141744 GT AGG (GGC) AG 141902-141996 GT CGG (GAC) AG 142184-142391 GC AGG (GCC) AG 142769-142990 GT AGG (GTA) AG 143328-143526 GT AGG (GTT) AG 144508-144605 GT AGG (GTG) AG 144712-144882 GT AGG (CTG) AG 145099-145239 GT AGG (ACG) AG 145670-145849 GT AGG (ACC) AG 146109-146273 GT AGG (AAG) AG 146566-146640 GT CTG (GTG) AG 146769-146939 GT AGG add_exon() Sorry, pasa_asmbl_37019.p1 143328-143526-terminal-3 is invalid. -recovered pasa_asmbl_37019.p1, terminal, 143328, 143526 -recovered pasa_asmbl_37019.p1, internal, 133946, 134117 -recovered pasa_asmbl_37019.p1, internal, 134463, 134719 -recovered pasa_asmbl_37019.p1, internal, 135185, 135331 -recovered pasa_asmbl_37019.p1, internal, 135761, 135929 -recovered pasa_asmbl_37019.p1, internal, 136148, 136238 -recovered pasa_asmbl_37019.p1, internal, 136336, 136406 -recovered pasa_asmbl_37019.p1, internal, 137413, 137563 -recovered pasa_asmbl_37019.p1, internal, 138420, 138523 -recovered pasa_asmbl_37019.p1, internal, 139689, 139780 -recovered pasa_asmbl_37019.p1, internal, 139871, 139964 -recovered pasa_asmbl_37019.p1, internal, 140406, 140625 -recovered pasa_asmbl_37019.p1, internal, 141072, 141193 -recovered pasa_asmbl_37019.p1, internal, 141557, 141744 -recovered pasa_asmbl_37019.p1, internal, 141902, 141996 -recovered pasa_asmbl_37019.p1, internal, 142184, 142391 -recovered pasa_asmbl_37019.p1, internal, 142769, 142990 -recovered pasa_asmbl_37019.p1, internal, 143328, 143526 -recovered pasa_asmbl_37019.p1, internal, 144508, 144605 -recovered pasa_asmbl_37019.p1, internal, 144712, 144882 -recovered pasa_asmbl_37019.p1, internal, 145099, 145239 -recovered pasa_asmbl_37019.p1, internal, 145670, 145849 -recovered pasa_asmbl_37019.p1, internal, 146109, 146273 -recovered pasa_asmbl_37019.p1, internal, 146566, 146640 -recovered pasa_asmbl_37019.p1, internal, 146769, 146939 Couldn't classify 124627, 124730 Couldn't classify 125887, 126006 Sorry, prediction pasa_asmbl_37027.p2 fails validation. (AAC) AG 124627-124730 GT AGG (CCG) AG 125222-125330 GT AGG (GAG) AG 125486-125572 GT AGG (CGT) AG 125887-126006 AA AGA -recovered pasa_asmbl_37027.p2, internal, 124627, 124730 -recovered pasa_asmbl_37027.p2, internal, 125222, 125330 -recovered pasa_asmbl_37027.p2, internal, 125486, 125572 Valid prediction for GlimmerHMM_glimmerT_58866-T1 Valid prediction for GlimmerHMM_glimmerT_58858-T1 Valid prediction for pasa_asmbl_37114.p1 Valid prediction for GeneMark_model.102555_t Valid prediction for GeneMark_model.102572_t Valid prediction for Augustus_model.g39215.t1 Valid prediction for pasa_asmbl_37032.p1 Valid prediction for snap_scaffold_27-snap.1602-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for Augustus_model.g39227.t1 Valid prediction for GlimmerHMM_glimmerT_58868-T1 Valid prediction for snap_scaffold_27-snap.1571-T1 Valid prediction for snap_scaffold_27-snap.1599-T1 Couldn't classify 115090, 115162 Couldn't classify 121293, 121391 Sorry, prediction pasa_asmbl_37028.p1 fails validation. (TCT) CC 115090-115162 GT AGG (CCA) AG 116733-116917 GT TGG (GAA) AG 117333-117386 GT AGG (CTC) AG 117583-117722 GT AAG (TGA) AG 118379-118469 GT AGG (ATC) AG 118893-118972 GT GGG (ATA) AG 119094-119174 GT AGG (GTT) AG 120559-120727 GT AGG (GAG) AG 121042-121134 GT CGG (ACT) AG 121293-121391 GT TGG -recovered pasa_asmbl_37028.p1, internal, 116733, 116917 -recovered pasa_asmbl_37028.p1, internal, 117333, 117386 -recovered pasa_asmbl_37028.p1, internal, 117583, 117722 -recovered pasa_asmbl_37028.p1, internal, 118379, 118469 -recovered pasa_asmbl_37028.p1, internal, 118893, 118972 -recovered pasa_asmbl_37028.p1, internal, 119094, 119174 -recovered pasa_asmbl_37028.p1, internal, 120559, 120727 -recovered pasa_asmbl_37028.p1, internal, 121042, 121134 -recovered pasa_asmbl_37028.p1, internal, 121293, 121391 Valid prediction for HiQ_model.g39223.t1 Valid prediction for GeneMark_model.102570_t Couldn't classify 128841, 128929 Couldn't classify 132751, 132870 Sorry, prediction pasa_asmbl_37024.p1 fails validation. (CTG) AC 128841-128929 GT AAG (CAG) AG 129271-129460 GT AGG (GTG) AG 129782-129906 GT AGG (AGA) AG 130439-130496 GT AGG (AAT) AG 131007-131098 GT AGG (CAC) AG 131320-131492 GT CGG (TCC) AG 131842-132002 GT AGG (GCC) AG 132267-132377 GT GGG (GTG) AG 132751-132870 TG GCT -recovered pasa_asmbl_37024.p1, internal, 129271, 129460 -recovered pasa_asmbl_37024.p1, internal, 129782, 129906 -recovered pasa_asmbl_37024.p1, internal, 130439, 130496 -recovered pasa_asmbl_37024.p1, internal, 131007, 131098 -recovered pasa_asmbl_37024.p1, internal, 131320, 131492 -recovered pasa_asmbl_37024.p1, internal, 131842, 132002 -recovered pasa_asmbl_37024.p1, internal, 132267, 132377 Valid prediction for Augustus_model.g39222.t1 Valid prediction for Augustus_model.g39211.t1 Couldn't classify 23246, 23659 Sorry, prediction pasa_asmbl_36362.p1 fails validation. (ATG) TC 23246-23659 TC TCT Valid prediction for snap_scaffold_27-snap.1586-T1 Valid prediction for GeneMark_model.102598_t Valid prediction for GeneMark_model.102590_t Valid prediction for GeneMark_model.102559_t Valid prediction for Augustus_model.g39226.t1 Valid prediction for GeneMark_model.102594_t Valid prediction for GlimmerHMM_glimmerT_58864-T1 Valid prediction for GeneMark_model.102585_t Valid prediction for GeneMark_model.102602_t Valid prediction for GlimmerHMM_glimmerT_58878-T1 Valid prediction for GeneMark_model.102599_t Valid prediction for snap_scaffold_27-snap.1607-T1 Couldn't classify 127956, 128102 Couldn't classify 128670, 128765 Sorry, prediction pasa_asmbl_37026.p2 fails validation. (GAG) CA 127956-128102 GT AGG (GAT) AG 128444-128530 GT CGG (GCC) AG 128670-128765 CA CCC -recovered pasa_asmbl_37026.p2, internal, 128444, 128530 Valid prediction for GlimmerHMM_glimmerT_58859-T1 Couldn't classify 172611, 172756 Couldn't classify 173982, 174044 Sorry, prediction pasa_asmbl_37015.p1 fails validation. (CAC) CC 172611-172756 GT TCG (TGT) AG 173084-173207 GT AGG (CCC) AG 173485-173643 GT GGG (ATG) AG 173738-173806 GT AGG (ATC) AG 173982-174044 GG CGG -recovered pasa_asmbl_37015.p1, initial, 173738, 173806 -recovered pasa_asmbl_37015.p1, internal, 173084, 173207 -recovered pasa_asmbl_37015.p1, internal, 173485, 173643 -recovered pasa_asmbl_37015.p1, internal, 173738, 173806 Valid prediction for GeneMark_model.102566_t Valid prediction for snap_scaffold_27-snap.1605-T1 Valid prediction for GeneMark_model.102596_t Valid prediction for GlimmerHMM_glimmerT_58862-T1 Valid prediction for GlimmerHMM_glimmerT_58872-T1 Valid prediction for CodingQuarry_transcript_41832-T1 Valid prediction for GeneMark_model.102554_t Valid prediction for GeneMark_model.102578_t Valid prediction for snap_scaffold_27-snap.1573-T1 Valid prediction for Augustus_model.g39218.t1 Valid prediction for GeneMark_model.102592_t Valid prediction for GeneMark_model.102605_t Valid prediction for GeneMark_model.102601_t Valid prediction for snap_scaffold_27-snap.1582-T1 Valid prediction for GeneMark_model.102582_t Valid prediction for snap_scaffold_27-snap.1578-T1 Couldn't classify 39152, 39649 Sorry, prediction pasa_asmbl_37033.p1 fails validation. (ATG) GG 38880-38948 GT AGG (TGT) AG 39152-39649 GG CGG -recovered pasa_asmbl_37033.p1, initial, 38880, 38948 Valid prediction for GeneMark_model.102568_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 35315, rend_intergenic: 31197 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45822, rend_intergenic: 35488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 80844, rend_intergenic: 56857 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 81753, rend_intergenic: 81042 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102682, rend_intergenic: 82084 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105936, rend_intergenic: 103517 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117168, rend_intergenic: 112648 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125729, rend_intergenic: 117232 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158049, rend_intergenic: 126387 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 188317, rend_intergenic: 179830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202440, rend_intergenic: 194442 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 206619, rend_intergenic: 202800 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 94983, rend_intergenic: 94980 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 209158 -exon list size: 931 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.3 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.6 43.7 43.8 43.9 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.6 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.4 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.8 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.4 99.5 99.6 99.7 99.8 99.9 -found 29 predictions from path traversal Error with prediction: snap lend_intergenic: 35315, rend_intergenic: 31197 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45822, rend_intergenic: 35488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 80844, rend_intergenic: 56857 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 81753, rend_intergenic: 81042 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102682, rend_intergenic: 82084 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105936, rend_intergenic: 103517 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117168, rend_intergenic: 112648 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125729, rend_intergenic: 117232 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158049, rend_intergenic: 126387 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 188317, rend_intergenic: 179830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202440, rend_intergenic: 194442 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 206619, rend_intergenic: 202800 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 94983, rend_intergenic: 94980 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 15 predictions persist after filtering for low support