-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_27/scaffold_27_5608727-5804018

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.102282_t
Valid prediction for snap_scaffold_27-snap.1369-T1
Couldn't classify 45124, 45204
Couldn't classify 55045, 55071
Sorry, prediction pasa_asmbl_36307.p1 fails validation.
(ACT)	 AG	45124-45204	GT	CCG
(GCC)	 AG	46232-46382	GT	AGG
(GAA)	 AG	48160-48294	GT	AGG
(ACT)	 AG	48564-48716	GT	AGG
(GTC)	 AG	50181-50343	GT	ATG
(TGA)	 AG	50623-50767	GT	AGG
(GCC)	 AG	50896-51070	GT	AGG
(GGT)	 AG	51338-51510	GT	AGG
(ACC)	 AG	51853-52275	GT	AGG
(CAA)	 AG	53651-53774	GT	GAG
(TTC)	 AG	53908-54113	GT	AGG
(ACC)	 AG	55045-55071	AG	ACA
-recovered pasa_asmbl_36307.p1, internal, 45124, 45204
-recovered pasa_asmbl_36307.p1, internal, 46232, 46382
-recovered pasa_asmbl_36307.p1, internal, 48160, 48294
-recovered pasa_asmbl_36307.p1, internal, 48564, 48716
-recovered pasa_asmbl_36307.p1, internal, 50181, 50343
-recovered pasa_asmbl_36307.p1, internal, 50623, 50767
-recovered pasa_asmbl_36307.p1, internal, 50896, 51070
-recovered pasa_asmbl_36307.p1, internal, 51338, 51510
-recovered pasa_asmbl_36307.p1, internal, 51853, 52275
-recovered pasa_asmbl_36307.p1, internal, 53651, 53774
-recovered pasa_asmbl_36307.p1, internal, 53908, 54113
Valid prediction for GeneMark_model.102276_t
Valid prediction for GeneMark_model.102294_t
Valid prediction for GeneMark_model.102261_t
Valid prediction for snap_scaffold_27-snap.1368-T1
Valid prediction for snap_scaffold_27-snap.1376-T1
Valid prediction for Augustus_model.g39130.t1
Valid prediction for GeneMark_model.102286_t
Valid prediction for snap_scaffold_27-snap.1356-T1
Valid prediction for snap_scaffold_27-snap.1386-T1
Valid prediction for Augustus_model.g39137.t1
Valid prediction for snap_scaffold_27-snap.1358-T1
Valid prediction for snap_scaffold_27-snap.1351-T1
Valid prediction for GlimmerHMM_glimmerT_58751-T1
Valid prediction for snap_scaffold_27-snap.1354-T1
Valid prediction for GlimmerHMM_glimmerT_58731-T1
Valid prediction for GeneMark_model.102296_t
Valid prediction for Augustus_model.g39129.t1
Valid prediction for GeneMark_model.102254_t
Valid prediction for Augustus_model.g39131.t1
Valid prediction for snap_scaffold_27-snap.1362-T1
Valid prediction for GeneMark_model.102265_t
Valid prediction for snap_scaffold_27-snap.1384-T1
Valid prediction for HiQ_model.g39133.t1
Valid prediction for GlimmerHMM_glimmerT_58732-T1
Valid prediction for GeneMark_model.102297_t
Couldn't classify 45124, 45276
Couldn't classify 47914, 47972
Sorry, prediction pasa_asmbl_36308.p2 fails validation.
(ACT)	 AG	45124-45276	GT	AGG
(GCC)	 AG	46232-46382	GT	AGG
(ATA)	 AG	47914-47972	TG	GCT
-recovered pasa_asmbl_36308.p2, internal, 45124, 45276
-recovered pasa_asmbl_36308.p2, internal, 46232, 46382
Valid prediction for GeneMark_model.102306_t
Valid prediction for GlimmerHMM_glimmerT_58740-T1
Valid prediction for snap_scaffold_27-snap.1375-T1
Valid prediction for GeneMark_model.102288_t
Valid prediction for GeneMark_model.102292_t
Valid prediction for GeneMark_model.102256_t
Valid prediction for GeneMark_model.102302_t
Couldn't classify 33298, 33699
Sorry, prediction pasa_asmbl_36306.p1 fails validation.
(ATG)	 AA	33298-33699	GG	ATG
Valid prediction for snap_scaffold_27-snap.1357-T1
Valid prediction for GlimmerHMM_glimmerT_58734-T1
Valid prediction for GeneMark_model.102283_t
Valid prediction for GlimmerHMM_glimmerT_58754-T1
Valid prediction for GeneMark_model.102290_t
Valid prediction for GlimmerHMM_glimmerT_58744-T1
Valid prediction for GeneMark_model.102252_t
Valid prediction for GeneMark_model.102258_t
Valid prediction for GlimmerHMM_glimmerT_58735-T1
Valid prediction for GeneMark_model.102278_t
Valid prediction for snap_scaffold_27-snap.1378-T1
Valid prediction for GlimmerHMM_glimmerT_58752-T1
Valid prediction for GeneMark_model.102273_t
Valid prediction for snap_scaffold_27-snap.1366-T1
Valid prediction for GeneMark_model.102255_t
Valid prediction for snap_scaffold_27-snap.1371-T1
Valid prediction for snap_scaffold_27-snap.1353-T1
Valid prediction for GlimmerHMM_glimmerT_58746-T1
Valid prediction for snap_scaffold_27-snap.1387-T1
Valid prediction for snap_scaffold_27-snap.1359-T1
Valid prediction for pasa_asmbl_36316.p1
Valid prediction for GlimmerHMM_glimmerT_58737-T1
Valid prediction for GeneMark_model.102260_t
Valid prediction for GeneMark_model.102285_t
Valid prediction for snap_scaffold_27-snap.1372-T1
Valid prediction for Augustus_model.g39135.t1
Valid prediction for GeneMark_model.102269_t
Valid prediction for GeneMark_model.102281_t
Valid prediction for GeneMark_model.102279_t
Valid prediction for Augustus_model.g39136.t1
Valid prediction for GlimmerHMM_glimmerT_58745-T1
Valid prediction for GeneMark_model.102271_t
Couldn't classify 55342, 55444
Sorry, prediction pasa_asmbl_36310.p1 fails validation.
(CCC)	 CC	55342-55444	GT	TGG
(AGC)	 AG	55672-55816	GT	AGG
(GTA)	 AG	55966-56075	GT	TGG
(GCC)	 AG	56168-56310	GT	ACG
(CCC)	 AG	56642-56818	AC	AAA
-recovered pasa_asmbl_36310.p1, terminal, 56642, 56818
-recovered pasa_asmbl_36310.p1, internal, 55672, 55816
-recovered pasa_asmbl_36310.p1, internal, 55966, 56075
-recovered pasa_asmbl_36310.p1, internal, 56168, 56310
Valid prediction for snap_scaffold_27-snap.1380-T1
Valid prediction for GlimmerHMM_glimmerT_58743-T1
Valid prediction for GeneMark_model.102267_t
Valid prediction for GlimmerHMM_glimmerT_58748-T1
Valid prediction for GlimmerHMM_glimmerT_58750-T1
Valid prediction for snap_scaffold_27-snap.1360-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_41813-T1
Valid prediction for GeneMark_model.102266_t
Valid prediction for GeneMark_model.102303_t
Valid prediction for Augustus_model.g39134.t1
Valid prediction for snap_scaffold_27-snap.1395-T1
Valid prediction for GeneMark_model.102280_t
Valid prediction for GlimmerHMM_glimmerT_58741-T1
Valid prediction for Augustus_model.g39138.t1
Valid prediction for GeneMark_model.102274_t
Valid prediction for GlimmerHMM_glimmerT_58749-T1
Valid prediction for CodingQuarry_transcript_41814-T1
Valid prediction for Augustus_model.g39142.t1
Valid prediction for snap_scaffold_27-snap.1352-T1
Valid prediction for GeneMark_model.102291_t
Valid prediction for GeneMark_model.102268_t
Valid prediction for snap_scaffold_27-snap.1385-T1
Valid prediction for GeneMark_model.102253_t
Valid prediction for CodingQuarry_transcript_41810-T1
Valid prediction for snap_scaffold_27-snap.1373-T1
Valid prediction for snap_scaffold_27-snap.1392-T1
Valid prediction for HiQ_model.g39132.t1
Valid prediction for GeneMark_model.102263_t
Valid prediction for snap_scaffold_27-snap.1379-T1
Valid prediction for GeneMark_model.102300_t
Couldn't classify 3695, 3816
Sorry, prediction pasa_asmbl_36981.p1 fails validation.
(GAG)	 CA	3695-3816	GT	AGG
(GCA)	 AG	4042-4217	GT	GGG
(CTG)	 AG	4527-4648	GT	AGG
(ATA)	 AG	4876-4954	GT	CGG
(GTC)	 AG	6093-6175	GT	AGG
(GTG)	 AG	6398-6562	GT	TGG
(CTG)	 AG	7285-7447	GT	AGG
(GCA)	 AG	7795-7988	GT	AGG
(GGT)	 AG	8129-8266	GT	CCG
(GAA)	 AG	8569-8718	GT	ACG
(ATC)	 AG	9039-9266	GT	AGG
(GAT)	 AG	9434-9652	GT	AGG
(ACT)	 AG	9823-9967	GT	GAG
(GTG)	 AG	10128-10201	GT	TTG
(CAA)	 AG	10686-10733	AG	AGA
-recovered pasa_asmbl_36981.p1, terminal, 10686, 10733
-recovered pasa_asmbl_36981.p1, internal, 4042, 4217
-recovered pasa_asmbl_36981.p1, internal, 4527, 4648
-recovered pasa_asmbl_36981.p1, internal, 4876, 4954
-recovered pasa_asmbl_36981.p1, internal, 6093, 6175
-recovered pasa_asmbl_36981.p1, internal, 6398, 6562
-recovered pasa_asmbl_36981.p1, internal, 7285, 7447
-recovered pasa_asmbl_36981.p1, internal, 7795, 7988
-recovered pasa_asmbl_36981.p1, internal, 8129, 8266
-recovered pasa_asmbl_36981.p1, internal, 8569, 8718
-recovered pasa_asmbl_36981.p1, internal, 9039, 9266
-recovered pasa_asmbl_36981.p1, internal, 9434, 9652
-recovered pasa_asmbl_36981.p1, internal, 9823, 9967
-recovered pasa_asmbl_36981.p1, internal, 10128, 10201
Valid prediction for snap_scaffold_27-snap.1381-T1
Valid prediction for Augustus_model.g39140.t1
Valid prediction for GeneMark_model.102298_t
Valid prediction for GeneMark_model.102270_t
Valid prediction for Augustus_model.g39139.t1
Valid prediction for GeneMark_model.102251_t
Valid prediction for GeneMark_model.102264_t
Valid prediction for GlimmerHMM_glimmerT_58756-T1
Valid prediction for GlimmerHMM_glimmerT_58739-T1
Valid prediction for Augustus_model.g39141.t1
Valid prediction for GeneMark_model.102284_t
Valid prediction for snap_scaffold_27-snap.1396-T1
Valid prediction for snap_scaffold_27-snap.1390-T1
Valid prediction for GeneMark_model.102257_t
Valid prediction for Augustus_model.g39128.t1
Valid prediction for snap_scaffold_27-snap.1391-T1
Valid prediction for GeneMark_model.102307_t
Valid prediction for GeneMark_model.102289_t
Valid prediction for snap_scaffold_27-snap.1370-T1
Valid prediction for snap_scaffold_27-snap.1388-T1
Valid prediction for GeneMark_model.102275_t
Valid prediction for GeneMark_model.102277_t
Valid prediction for GeneMark_model.102304_t
Valid prediction for snap_scaffold_27-snap.1393-T1
Valid prediction for snap_scaffold_27-snap.1361-T1
Valid prediction for GlimmerHMM_glimmerT_58733-T1
Valid prediction for GlimmerHMM_glimmerT_58738-T1
Valid prediction for snap_scaffold_27-snap.1377-T1
Valid prediction for GeneMark_model.102287_t
Valid prediction for snap_scaffold_27-snap.1397-T1
Valid prediction for GlimmerHMM_glimmerT_58747-T1
Valid prediction for GeneMark_model.102301_t
Valid prediction for GeneMark_model.102295_t
Valid prediction for snap_scaffold_27-snap.1363-T1
Valid prediction for snap_scaffold_27-snap.1364-T1
Valid prediction for GlimmerHMM_glimmerT_58757-T1
Valid prediction for GlimmerHMM_glimmerT_58755-T1
Valid prediction for snap_scaffold_27-snap.1394-T1
Valid prediction for CodingQuarry_transcript_41812-T1
Valid prediction for CodingQuarry_transcript_41811-T1
Valid prediction for GeneMark_model.102293_t
Valid prediction for GeneMark_model.102259_t
Couldn't classify 1396, 1502
Couldn't classify 2750, 3018
Sorry, prediction pasa_asmbl_36985.p1 fails validation.
(CCG)	 AA	1396-1502	GT	AGG
(ACA)	 AG	1761-1943	GT	AGG
(GCG)	 AG	2026-2148	GT	AAG
(GTC)	 AG	2257-2344	GT	ACG
(CAA)	 AG	2444-2612	GT	CGG
(ACG)	 AG	2750-3018	GT	AGG
-recovered pasa_asmbl_36985.p1, internal, 1761, 1943
-recovered pasa_asmbl_36985.p1, internal, 2026, 2148
-recovered pasa_asmbl_36985.p1, internal, 2257, 2344
-recovered pasa_asmbl_36985.p1, internal, 2444, 2612
-recovered pasa_asmbl_36985.p1, internal, 2750, 3018
Valid prediction for snap_scaffold_27-snap.1367-T1
Valid prediction for snap_scaffold_27-snap.1355-T1
Valid prediction for GlimmerHMM_glimmerT_58736-T1
Valid prediction for GlimmerHMM_glimmerT_58742-T1
Valid prediction for snap_scaffold_27-snap.1374-T1
Valid prediction for GeneMark_model.102299_t
Valid prediction for snap_scaffold_27-snap.1389-T1
Valid prediction for GlimmerHMM_glimmerT_58753-T1
Valid prediction for snap_scaffold_27-snap.1382-T1
Valid prediction for pasa_asmbl_36976.p1
Valid prediction for snap_scaffold_27-snap.1365-T1
Valid prediction for pasa_asmbl_36970.p1
Valid prediction for snap_scaffold_27-snap.1383-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7617, rend_intergenic: 2628  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19957, rend_intergenic: 7657  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31409, rend_intergenic: 21757  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40906, rend_intergenic: 36864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56818, rend_intergenic: 41288  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73336, rend_intergenic: 73243  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77539, rend_intergenic: 73653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84382, rend_intergenic: 78934  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95911, rend_intergenic: 88371  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104545, rend_intergenic: 100482  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108769, rend_intergenic: 107231  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114386, rend_intergenic: 111040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122589, rend_intergenic: 120718  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134910, rend_intergenic: 123942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145948, rend_intergenic: 138024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 195292
-exon list size: 819


building trellis

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53.5    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.3    
54.4    
54.6    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.6    
56.8    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.3    
58.5    
58.6    
58.7    
58.8    
59.0    
59.1    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.1    
62.2    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
63.9    
64.1    
64.2    
64.3    
64.4    
64.6    
64.7    
64.8    
64.9    
65.0    
65.2    
65.3    
65.4    
65.5    
65.7    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.6    
66.7    
66.9    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.5    
70.6    
70.8    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.6    
71.7    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.8    
73.0    
73.1    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.5    
75.6    
75.8    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.0    
80.1    
80.3    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.2    
81.4    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.2    
82.3    
82.5    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
83.9    
84.0    
84.2    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.5    
94.6    
94.8    
94.9    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 7617, rend_intergenic: 2628  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19957, rend_intergenic: 7657  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31409, rend_intergenic: 21757  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40906, rend_intergenic: 36864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56818, rend_intergenic: 41288  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73336, rend_intergenic: 73243  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77539, rend_intergenic: 73653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84382, rend_intergenic: 78934  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95911, rend_intergenic: 88371  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104545, rend_intergenic: 100482  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108769, rend_intergenic: 107231  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114386, rend_intergenic: 111040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122589, rend_intergenic: 120718  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134910, rend_intergenic: 123942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145948, rend_intergenic: 138024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 20 predictions persist after filtering for low support