-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_27/scaffold_27_1930727-2106677 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_27-snap.448-T1 Valid prediction for snap_scaffold_27-snap.488-T1 Valid prediction for GlimmerHMM_glimmerT_58122-T1 Valid prediction for HiQ_model.g38709.t1 Valid prediction for GeneMark_model.101166_t Valid prediction for Augustus_model.g38724.t1 Valid prediction for snap_scaffold_27-snap.466-T1 Valid prediction for GlimmerHMM_glimmerT_58115-T1 Valid prediction for GeneMark_model.101205_t Valid prediction for GlimmerHMM_glimmerT_58136-T1 Valid prediction for Augustus_model.g38714.t1 Valid prediction for GlimmerHMM_glimmerT_58130-T1 Valid prediction for GlimmerHMM_glimmerT_58111-T1 Valid prediction for Augustus_model.g38716.t1 Valid prediction for CodingQuarry_transcript_41705-T1 Couldn't classify 161435, 161575 Couldn't classify 162067, 162172 Couldn't classify 162598, 162756 Sorry, prediction pasa_asmbl_36027.p1 fails validation. (TCT) GG 161435-161575 AT TCA (GTG) AC 162067-162172 GT CGG (GGG) AG 162357-162445 GT AGG (CTG) AG 162598-162756 AT ACA -recovered pasa_asmbl_36027.p1, internal, 162357, 162445 Valid prediction for GlimmerHMM_glimmerT_58119-T1 Valid prediction for GeneMark_model.101194_t Couldn't classify 160432, 160520 Sorry, prediction pasa_asmbl_36026.p1 fails validation. (ATG) TA 158912-159185 GT TGG (GTT) AG 159488-159687 GT AGG (CTG) AG 159779-159856 GT GGG (AGG) AG 159980-160056 GT GGG (GCT) AG 160181-160293 GT AGG (TCA) AG 160432-160520 GG GTG -recovered pasa_asmbl_36026.p1, initial, 158912, 159185 -recovered pasa_asmbl_36026.p1, internal, 159488, 159687 -recovered pasa_asmbl_36026.p1, internal, 159779, 159856 -recovered pasa_asmbl_36026.p1, internal, 159980, 160056 -recovered pasa_asmbl_36026.p1, internal, 160181, 160293 Valid prediction for GlimmerHMM_glimmerT_58134-T1 Valid prediction for GlimmerHMM_glimmerT_58120-T1 Valid prediction for snap_scaffold_27-snap.449-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for snap_scaffold_27-snap.456-T1 Valid prediction for snap_scaffold_27-snap.444-T1 Valid prediction for snap_scaffold_27-snap.462-T1 Valid prediction for GlimmerHMM_glimmerT_58124-T1 Valid prediction for GeneMark_model.101207_t Valid prediction for snap_scaffold_27-snap.486-T1 Valid prediction for Augustus_model.g38705.t1 Valid prediction for Augustus_model.g38712.t1 Valid prediction for snap_scaffold_27-snap.459-T1 Valid prediction for snap_scaffold_27-snap.460-T1 Valid prediction for GeneMark_model.101187_t Valid prediction for snap_scaffold_27-snap.469-T1 Valid prediction for CodingQuarry_transcript_41704-T1 Valid prediction for GeneMark_model.101178_t Couldn't classify 164283, 164437 Sorry, prediction pasa_asmbl_36028.p1 fails validation. (GGT) AA 164283-164437 GT CGG (AGT) AG 164770-164800 GT CTG (CAC) AG 164947-165008 GT AAG (CTA) AG 165199-165304 GT AGG (AAC) AG 165847-166137 GC GAG -recovered pasa_asmbl_36028.p1, terminal, 165847, 166137 -recovered pasa_asmbl_36028.p1, internal, 164770, 164800 -recovered pasa_asmbl_36028.p1, internal, 164947, 165008 -recovered pasa_asmbl_36028.p1, internal, 165199, 165304 -recovered pasa_asmbl_36028.p1, internal, 165847, 166137 Valid prediction for GeneMark_model.101176_t Valid prediction for GeneMark_model.101202_t Valid prediction for snap_scaffold_27-snap.468-T1 Couldn't classify 22497, 22579 Sorry, prediction pasa_asmbl_36013.p1 fails validation. (TGC) CA 22497-22579 GT AAG (GTG) AG 24720-24824 GT AAG (GCA) AG 25132-25195 GT AGG (GTG) AG 26560-26656 GT ATG (ACC) AG 28135-28248 GT AGG (ACC) AG 31032-31177 GT TGG (GCG) AG 31304-31543 CT AAC -recovered pasa_asmbl_36013.p1, terminal, 31304, 31543 -recovered pasa_asmbl_36013.p1, internal, 24720, 24824 -recovered pasa_asmbl_36013.p1, internal, 25132, 25195 -recovered pasa_asmbl_36013.p1, internal, 26560, 26656 -recovered pasa_asmbl_36013.p1, internal, 28135, 28248 -recovered pasa_asmbl_36013.p1, internal, 31032, 31177 Valid prediction for snap_scaffold_27-snap.441-T1 Valid prediction for CodingQuarry_transcript_41698-T1 Valid prediction for snap_scaffold_27-snap.445-T1 Valid prediction for GeneMark_model.101198_t Valid prediction for Augustus_model.g38713.t1 Valid prediction for GeneMark_model.101180_t Valid prediction for Augustus_model.g38703.t1 Valid prediction for snap_scaffold_27-snap.470-T1 Valid prediction for HiQ_model.g38718.t1 Valid prediction for snap_scaffold_27-snap.485-T1 Valid prediction for pasa_asmbl_36023.p1 Valid prediction for CodingQuarry_transcript_41703-T1 Valid prediction for snap_scaffold_27-snap.463-T1 Valid prediction for GeneMark_model.101196_t Valid prediction for GlimmerHMM_glimmerT_58114-T1 Valid prediction for GeneMark_model.101200_t Couldn't classify 54525, 54594 Sorry, prediction pasa_asmbl_36019.p1 fails validation. (CAA) AC 54525-54594 GT AGG (TTT) AG 55068-55178 GT AGG (AGA) AG 55318-55389 GT AGG (GAG) AG 55545-55643 GT AGG (CGT) AG 55871-55972 GT GGG (CCC) AG 56180-56252 GT AAG (GAA) AG 56339-56418 GT CAG (AAA) AG 56705-57156 GT AGG (GAG) AG 57254-57332 GT AGG (GAG) AG 57545-57690 GT TGG (GGT) AG 57776-57832 GT AGG (GAG) AG 58062-58173 GT AGG (AGT) AG 58289-58353 GC GAG -recovered pasa_asmbl_36019.p1, terminal, 55318, 55389 add_exon() Sorry, pasa_asmbl_36019.p1 57254-57332-terminal-3 is invalid. -recovered pasa_asmbl_36019.p1, terminal, 57254, 57332 -recovered pasa_asmbl_36019.p1, terminal, 58289, 58353 -recovered pasa_asmbl_36019.p1, internal, 55068, 55178 -recovered pasa_asmbl_36019.p1, internal, 55318, 55389 -recovered pasa_asmbl_36019.p1, internal, 55545, 55643 -recovered pasa_asmbl_36019.p1, internal, 55871, 55972 -recovered pasa_asmbl_36019.p1, internal, 56180, 56252 -recovered pasa_asmbl_36019.p1, internal, 56339, 56418 -recovered pasa_asmbl_36019.p1, internal, 56705, 57156 -recovered pasa_asmbl_36019.p1, internal, 57254, 57332 -recovered pasa_asmbl_36019.p1, internal, 57545, 57690 -recovered pasa_asmbl_36019.p1, internal, 57776, 57832 -recovered pasa_asmbl_36019.p1, internal, 58062, 58173 -recovered pasa_asmbl_36019.p1, internal, 58289, 58353 Valid prediction for GlimmerHMM_glimmerT_58125-T1 Couldn't classify 10177, 10244 Couldn't classify 16992, 17308 Sorry, prediction pasa_asmbl_36001.p1 fails validation. (GGG) CA 10177-10244 GT AGG (GAG) AG 10532-10604 GT GGG (ACA) AG 11735-11913 GT AGG (TCA) AG 12152-12545 GT AGG (CTC) AG 12779-12895 GT AGG (GTT) AG 15407-15527 GT GGG (AAT) AG 16992-17308 GC GAG -recovered pasa_asmbl_36001.p1, internal, 10532, 10604 -recovered pasa_asmbl_36001.p1, internal, 11735, 11913 -recovered pasa_asmbl_36001.p1, internal, 12152, 12545 -recovered pasa_asmbl_36001.p1, internal, 12779, 12895 -recovered pasa_asmbl_36001.p1, internal, 15407, 15527 -recovered pasa_asmbl_36001.p1, internal, 16992, 17308 Valid prediction for snap_scaffold_27-snap.461-T1 Valid prediction for GeneMark_model.101183_t Valid prediction for GeneMark_model.101170_t Valid prediction for CodingQuarry_transcript_41697-T1 Valid prediction for Augustus_model.g38711.t1 Valid prediction for GlimmerHMM_glimmerT_58128-T1 Valid prediction for snap_scaffold_27-snap.484-T1 Valid prediction for HiQ_model.g38704.t1 Valid prediction for GeneMark_model.101168_t Valid prediction for GeneMark_model.101193_t Valid prediction for snap_scaffold_27-snap.453-T1 Valid prediction for GeneMark_model.101172_t Couldn't classify 55768, 55972 Sorry, prediction pasa_asmbl_36021.p1 fails validation. (TAC) TA 55768-55972 GT GGG (CCC) AG 56180-56252 GT AAG (GAA) AG 56339-56418 GT CAG (AAA) AG 56705-57156 GT AGG (GAG) AG 57254-57332 GT AGG (GAG) AG 57545-57690 GT TGG (GGT) AG 57776-57832 GT AGG (GAG) AG 58062-58173 GT AGG (AGT) AG 58289-58353 GC GAG add_exon() Sorry, pasa_asmbl_36021.p1 57254-57332-terminal-3 is invalid. -recovered pasa_asmbl_36021.p1, terminal, 57254, 57332 -recovered pasa_asmbl_36021.p1, terminal, 58289, 58353 -recovered pasa_asmbl_36021.p1, internal, 56180, 56252 -recovered pasa_asmbl_36021.p1, internal, 56339, 56418 -recovered pasa_asmbl_36021.p1, internal, 56705, 57156 -recovered pasa_asmbl_36021.p1, internal, 57254, 57332 -recovered pasa_asmbl_36021.p1, internal, 57545, 57690 -recovered pasa_asmbl_36021.p1, internal, 57776, 57832 -recovered pasa_asmbl_36021.p1, internal, 58062, 58173 -recovered pasa_asmbl_36021.p1, internal, 58289, 58353 Valid prediction for GeneMark_model.101190_t Valid prediction for snap_scaffold_27-snap.474-T1 Valid prediction for GeneMark_model.101174_t Valid prediction for snap_scaffold_27-snap.483-T1 Valid prediction for GeneMark_model.101186_t Valid prediction for snap_scaffold_27-snap.472-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for snap_scaffold_27-snap.452-T1 Valid prediction for GlimmerHMM_glimmerT_58113-T1 Valid prediction for GlimmerHMM_glimmerT_58123-T1 Valid prediction for snap_scaffold_27-snap.476-T1 Valid prediction for snap_scaffold_27-snap.475-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.101179_t Valid prediction for GeneMark_model.101204_t Valid prediction for GlimmerHMM_glimmerT_58135-T1 Valid prediction for snap_scaffold_27-snap.478-T1 Valid prediction for CodingQuarry_transcript_41699-T1 Valid prediction for GeneMark_model.101188_t Valid prediction for HiQ_model.g38720.t1 Valid prediction for CodingQuarry_transcript_41701-T1 Valid prediction for GlimmerHMM_glimmerT_58116-T1 Valid prediction for GeneMark_model.101201_t Valid prediction for GeneMark_model.101203_t Valid prediction for snap_scaffold_27-snap.451-T1 Valid prediction for snap_scaffold_27-snap.477-T1 Valid prediction for snap_scaffold_27-snap.481-T1 Valid prediction for snap_scaffold_27-snap.443-T1 Valid prediction for pasa_asmbl_36747.p1 Valid prediction for GeneMark_model.101181_t Valid prediction for snap_scaffold_27-snap.471-T1 Valid prediction for Augustus_model.g38721.t1 Valid prediction for GeneMark_model.101197_t Valid prediction for snap_scaffold_27-snap.467-T1 Valid prediction for snap_scaffold_27-snap.464-T1 Valid prediction for GlimmerHMM_glimmerT_58129-T1 Valid prediction for snap_scaffold_27-snap.480-T1 Valid prediction for snap_scaffold_27-snap.458-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for GeneMark_model.101165_t Valid prediction for Augustus_model.g38719.t1 Valid prediction for snap_scaffold_27-snap.465-T1 Valid prediction for HiQ_model.g38707.t1 Valid prediction for snap_scaffold_27-snap.440-T1 Valid prediction for snap_scaffold_27-snap.439-T1 Valid prediction for HiQ_model.g38708.t1 Valid prediction for Augustus_model.g38710.t1 Valid prediction for snap_scaffold_27-snap.479-T1 Valid prediction for Augustus_model.g38715.t1 Couldn't classify 25993, 26096 Couldn't classify 26400, 26635 Sorry, prediction CodingQuarry_transcript_41706-T1 fails validation. (ATG) GT 24895-24900 GT GGG (ACA) AG 25447-25542 GT AGG (ATT) AG 25749-25873 GT AGG (AAT) AG 25993-26096 GG GGG (AGA) GC 26400-26635 TC AGT -recovered CodingQuarry_transcript_41706-T1, initial, 24895, 24900 -recovered CodingQuarry_transcript_41706-T1, internal, 25447, 25542 -recovered CodingQuarry_transcript_41706-T1, internal, 25749, 25873 Valid prediction for GlimmerHMM_glimmerT_58112-T1 Valid prediction for snap_scaffold_27-snap.457-T1 Couldn't classify 25993, 26096 Couldn't classify 26400, 26596 Sorry, prediction CodingQuarry_transcript_41707-T1 fails validation. (ATG) GT 24895-24900 GT GGG (ACA) AG 25447-25542 GT AGG (ATT) AG 25749-25873 GT AGG (AAT) AG 25993-26096 GG GGG (AGA) GC 26400-26596 GT AGG (GTG) AG 26716-26805 TC AGT -recovered CodingQuarry_transcript_41707-T1, initial, 24895, 24900 -recovered CodingQuarry_transcript_41707-T1, terminal, 26716, 26805 -recovered CodingQuarry_transcript_41707-T1, internal, 25447, 25542 -recovered CodingQuarry_transcript_41707-T1, internal, 25749, 25873 Valid prediction for CodingQuarry_transcript_41702-T1 Valid prediction for snap_scaffold_27-snap.482-T1 Couldn't classify 38572, 38674 Sorry, prediction pasa_asmbl_36757.p1 fails validation. (TTT) TA 38572-38674 GT CGG (GCC) AG 39170-39438 GT AGG (GAG) AG 39762-39926 CC GAC -recovered pasa_asmbl_36757.p1, terminal, 39762, 39926 -recovered pasa_asmbl_36757.p1, internal, 39170, 39438 Valid prediction for GlimmerHMM_glimmerT_58131-T1 Valid prediction for GeneMark_model.101191_t Valid prediction for GlimmerHMM_glimmerT_58110-T1 Valid prediction for snap_scaffold_27-snap.454-T1 Valid prediction for GeneMark_model.101173_t Couldn't classify 21028, 21150 Sorry, prediction pasa_asmbl_36761.p1 fails validation. (CCA) CT 21028-21150 GT AGG (AGT) AG 21361-21520 GT AGG (CAC) AG 21699-21819 GT AGG (GCT) AG 22490-22580 GT AGG (GAA) AG 22883-23137 AA AGA -recovered pasa_asmbl_36761.p1, terminal, 22883, 23137 -recovered pasa_asmbl_36761.p1, internal, 21361, 21520 -recovered pasa_asmbl_36761.p1, internal, 21699, 21819 -recovered pasa_asmbl_36761.p1, internal, 22490, 22580 Valid prediction for CodingQuarry_transcript_41700-T1 Valid prediction for GlimmerHMM_glimmerT_58126-T1 Valid prediction for Augustus_model.g38702.t1 Valid prediction for snap_scaffold_27-snap.455-T1 Valid prediction for snap_scaffold_27-snap.446-T1 Valid prediction for GlimmerHMM_glimmerT_58127-T1 Valid prediction for GlimmerHMM_glimmerT_58117-T1 Valid prediction for GeneMark_model.101185_t Valid prediction for GlimmerHMM_glimmerT_58121-T1 Valid prediction for GeneMark_model.101177_t Valid prediction for GeneMark_model.101184_t Valid prediction for snap_scaffold_27-snap.447-T1 Valid prediction for snap_scaffold_27-snap.442-T1 Valid prediction for GeneMark_model.101208_t Valid prediction for GlimmerHMM_glimmerT_58133-T1 Valid prediction for HiQ_model.g38706.t1 Valid prediction for GlimmerHMM_glimmerT_58118-T1 Couldn't classify 25993, 26096 Couldn't classify 26400, 26578 Sorry, prediction CodingQuarry_transcript_41708-T1 fails validation. (ATG) GT 24895-24900 GT GGG (ACA) AG 25447-25542 GT AGG (ATT) AG 25749-25873 GT AGG (AAT) AG 25993-26096 GG GGG (AGA) GC 26400-26578 GT AGG (GTG) AG 26670-26687 GT AGG (GTG) AG 26716-26805 TC AGT -recovered CodingQuarry_transcript_41708-T1, initial, 24895, 24900 -recovered CodingQuarry_transcript_41708-T1, terminal, 26716, 26805 -recovered CodingQuarry_transcript_41708-T1, internal, 25447, 25542 -recovered CodingQuarry_transcript_41708-T1, internal, 25749, 25873 -recovered CodingQuarry_transcript_41708-T1, internal, 26670, 26687 Valid prediction for GeneMark_model.101206_t Valid prediction for GeneMark_model.101169_t Valid prediction for pasa_asmbl_36763.p1 Valid prediction for GeneMark_model.101195_t Valid prediction for GeneMark_model.101182_t Valid prediction for snap_scaffold_27-snap.450-T1 Valid prediction for pasa_asmbl_36750.p1 Valid prediction for snap_scaffold_27-snap.487-T1 Valid prediction for snap_scaffold_27-snap.473-T1 Valid prediction for Augustus_model.g38717.t1 Valid prediction for GeneMark_model.101175_t Valid prediction for GeneMark_model.101199_t Valid prediction for GlimmerHMM_glimmerT_58132-T1 Valid prediction for Augustus_model.g38722.t1 Valid prediction for GeneMark_model.101171_t Valid prediction for GeneMark_model.101192_t Valid prediction for GeneMark_model.101167_t Valid prediction for Augustus_model.g38723.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 149320, rend_intergenic: 149317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 8089, rend_intergenic: 6384 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13506, rend_intergenic: 8132 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21849, rend_intergenic: 15233 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29373, rend_intergenic: 21987 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32746, rend_intergenic: 29424 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39525, rend_intergenic: 34147 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47295, rend_intergenic: 40662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62446, rend_intergenic: 54949 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66611, rend_intergenic: 62792 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86103, rend_intergenic: 79802 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93663, rend_intergenic: 89723 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94430, rend_intergenic: 94007 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107259, rend_intergenic: 102358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120264, rend_intergenic: 114866 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 134624, rend_intergenic: 120779 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155979, rend_intergenic: 152846 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 175951 -exon list size: 861 building trellis 0.1 0.2 0.3 0.5 0.6 0.7 0.8 0.9 1.0 1.2 1.3 1.4 1.5 1.6 1.7 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.7 2.8 2.9 3.0 3.1 3.2 3.4 3.5 3.6 3.7 3.8 3.9 4.1 4.2 4.3 4.4 4.5 4.6 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.6 5.7 5.8 5.9 6.0 6.1 6.3 6.4 6.5 6.6 6.7 6.8 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.8 7.9 8.0 8.1 8.2 8.3 8.5 8.6 8.7 8.8 8.9 9.0 9.2 9.3 9.4 9.5 9.6 9.7 9.8 10.0 10.1 10.2 10.3 10.4 10.5 10.7 10.8 10.9 11.0 11.1 11.2 11.4 11.5 11.6 11.7 11.8 11.9 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.9 13.0 13.1 13.2 13.3 13.4 13.6 13.7 13.8 13.9 14.0 14.1 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.1 15.2 15.3 15.4 15.5 15.6 15.8 15.9 16.0 16.1 16.2 16.3 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.3 17.4 17.5 17.6 17.7 17.8 18.0 18.1 18.2 18.3 18.4 18.5 18.7 18.8 18.9 19.0 19.1 19.2 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.2 20.3 20.4 20.5 20.6 20.7 20.9 21.0 21.1 21.2 21.3 21.4 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.4 22.5 22.6 22.7 22.8 22.9 23.1 23.2 23.3 23.4 23.5 23.6 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.6 24.7 24.8 24.9 25.0 25.1 25.3 25.4 25.5 25.6 25.7 25.8 26.0 26.1 26.2 26.3 26.4 26.5 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.5 27.6 27.7 27.8 27.9 28.0 28.2 28.3 28.4 28.5 28.6 28.7 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.7 29.8 29.9 30.0 30.1 30.2 30.4 30.5 30.6 30.7 30.8 30.9 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.9 32.0 32.1 32.2 32.3 32.4 32.6 32.7 32.8 32.9 33.0 33.1 33.3 33.4 33.5 33.6 33.7 33.8 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.8 34.9 35.0 35.1 35.2 35.3 35.5 35.6 35.7 35.8 35.9 36.0 36.2 36.3 36.4 36.5 36.6 36.7 36.8 37.0 37.1 37.2 37.3 37.4 37.5 37.7 37.8 37.9 38.0 38.1 38.2 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.2 39.3 39.4 39.5 39.6 39.7 39.9 40.0 40.1 40.2 40.3 40.4 40.6 40.7 40.8 40.9 41.0 41.1 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.1 42.2 42.3 42.4 42.5 42.6 42.8 42.9 43.0 43.1 43.2 43.3 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.3 44.4 44.5 44.6 44.7 44.8 45.0 45.1 45.2 45.3 45.4 45.5 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.5 46.6 46.7 46.8 46.9 47.0 47.2 47.3 47.4 47.5 47.6 47.7 47.9 48.0 48.1 48.2 48.3 48.4 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.4 49.5 49.6 49.7 49.8 49.9 50.1 50.2 50.3 50.4 50.5 50.6 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.6 51.7 51.8 51.9 52.0 52.1 52.3 52.4 52.5 52.6 52.7 52.8 53.0 53.1 53.2 53.3 53.4 53.5 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.5 54.6 54.7 54.8 54.9 55.0 55.2 55.3 55.4 55.5 55.6 55.7 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.7 56.8 56.9 57.0 57.1 57.2 57.4 57.5 57.6 57.7 57.8 57.9 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.9 59.0 59.1 59.2 59.3 59.4 59.6 59.7 59.8 59.9 60.0 60.1 60.3 60.4 60.5 60.6 60.7 60.8 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.8 61.9 62.0 62.1 62.2 62.3 62.5 62.6 62.7 62.8 62.9 63.0 63.2 63.3 63.4 63.5 63.6 63.7 63.8 64.0 64.1 64.2 64.3 64.4 64.5 64.7 64.8 64.9 65.0 65.1 65.2 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.2 66.3 66.4 66.5 66.6 66.7 66.9 67.0 67.1 67.2 67.3 67.4 67.6 67.7 67.8 67.9 68.0 68.1 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.1 69.2 69.3 69.4 69.5 69.6 69.8 69.9 70.0 70.1 70.2 70.3 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.3 71.4 71.5 71.6 71.7 71.8 72.0 72.1 72.2 72.3 72.4 72.5 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.5 73.6 73.7 73.8 73.9 74.0 74.2 74.3 74.4 74.5 74.6 74.7 74.9 75.0 75.1 75.2 75.3 75.4 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.4 76.5 76.6 76.7 76.8 76.9 77.1 77.2 77.3 77.4 77.5 77.6 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.6 78.7 78.8 78.9 79.0 79.1 79.3 79.4 79.5 79.6 79.7 79.8 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.8 80.9 81.0 81.1 81.2 81.3 81.5 81.6 81.7 81.8 81.9 82.0 82.2 82.3 82.4 82.5 82.6 82.7 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.7 83.8 83.9 84.0 84.1 84.2 84.4 84.5 84.6 84.7 84.8 84.9 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.9 86.0 86.1 86.2 86.3 86.4 86.6 86.7 86.8 86.9 87.0 87.1 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.1 88.2 88.3 88.4 88.5 88.6 88.8 88.9 89.0 89.1 89.2 89.3 89.5 89.6 89.7 89.8 89.9 90.0 90.2 90.3 90.4 90.5 90.6 90.7 90.8 91.0 91.1 91.2 91.3 91.4 91.5 91.7 91.8 91.9 92.0 92.1 92.2 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.2 93.3 93.4 93.5 93.6 93.7 93.9 94.0 94.1 94.2 94.3 94.4 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.4 95.5 95.6 95.7 95.8 95.9 96.1 96.2 96.3 96.4 96.5 96.6 96.8 96.9 97.0 97.1 97.2 97.3 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.3 98.4 98.5 98.6 98.7 98.8 99.0 99.1 99.2 99.3 99.4 99.5 99.7 99.8 99.9 -found 32 predictions from path traversal Error with prediction: GlimmerHMM lend_intergenic: 149320, rend_intergenic: 149317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 8089, rend_intergenic: 6384 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13506, rend_intergenic: 8132 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21849, rend_intergenic: 15233 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29373, rend_intergenic: 21987 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32746, rend_intergenic: 29424 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39525, rend_intergenic: 34147 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47295, rend_intergenic: 40662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62446, rend_intergenic: 54949 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66611, rend_intergenic: 62792 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86103, rend_intergenic: 79802 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93663, rend_intergenic: 89723 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94430, rend_intergenic: 94007 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107259, rend_intergenic: 102358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120264, rend_intergenic: 114866 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 134624, rend_intergenic: 120779 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155979, rend_intergenic: 152846 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 27 predictions persist after filtering for low support