-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2699

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_63188-T1
add_exon() Sorry, GlimmerHMM_glimmerT_63188-T1 654-1020-terminal-1 is invalid.
Couldn't classify 666, 981
Sorry, prediction GeneMark_model.110530_t fails validation.
(CCT)	 AG	666-981	GT	TTG
-recovered GeneMark_model.110530_t, internal, 666, 981

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 148, 496
Sorry, prediction snap_scaffold_2699-snap.1-T1 fails validation.
(CAC)	 AG	148-496	GT	GGG
-recovered snap_scaffold_2699-snap.1-T1, internal, 148, 496

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1144
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support