-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2671

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 103, 193
Couldn't classify 650, 744
Sorry, prediction Augustus_model.g42147.t1 fails validation.
(CCT)	 AG	103-193	GT	GCG
(TTT)	 AG	650-744	GT	AGG
-recovered Augustus_model.g42147.t1, internal, 103, 193
-recovered Augustus_model.g42147.t1, internal, 650, 744
Couldn't classify 103, 193
Couldn't classify 650, 758
Sorry, prediction snap_scaffold_2671-snap.1-T1 fails validation.
(CCT)	 AG	103-193	GT	GCG
(TTT)	 AG	650-758	GT	GCG
-recovered snap_scaffold_2671-snap.1-T1, internal, 103, 193
-recovered snap_scaffold_2671-snap.1-T1, internal, 650, 758
Couldn't classify 103, 193
Couldn't classify 650, 706
Sorry, prediction GeneMark_model.110513_t fails validation.
(CCT)	 AG	103-193	GT	GCG
(TTT)	 AG	650-706	GT	CAG
-recovered GeneMark_model.110513_t, internal, 103, 193
-recovered GeneMark_model.110513_t, internal, 650, 706

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1156
-exon list size: 8


building trellis

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-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support