-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2663

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1121, 1129
Sorry, prediction GeneMark_model.110507_t fails validation.
(ATG)	 TA	805-809	GT	GTG
(TGA)	 AG	843-851	GT	GAG
(AGA)	 AG	875-955	GT	GAG
(ACA)	 AG	985-1011	GT	GAG
(AGT)	 AG	1037-1093	GT	GAG
(AGA)	 AG	1121-1129	GT	GAG
-recovered GeneMark_model.110507_t, initial, 805, 809
-recovered GeneMark_model.110507_t, internal, 843, 851
-recovered GeneMark_model.110507_t, internal, 875, 955
-recovered GeneMark_model.110507_t, internal, 985, 1011
-recovered GeneMark_model.110507_t, internal, 1037, 1093
-recovered GeneMark_model.110507_t, internal, 1121, 1129

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1158
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support