-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2637

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 469, 492
Couldn't classify 976, 1050
Sorry, prediction GeneMark_model.110486_t fails validation.
(AGC)	 AG	469-492	GT	AGG
(GAT)	 AG	515-577	GT	TGG
(CAT)	 AG	615-695	GT	GAG
(GGC)	 AG	976-1050	GT	CCG
-recovered GeneMark_model.110486_t, internal, 469, 492
-recovered GeneMark_model.110486_t, internal, 515, 577
-recovered GeneMark_model.110486_t, internal, 615, 695
-recovered GeneMark_model.110486_t, internal, 976, 1050

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_63169-T1
add_exon() Sorry, GlimmerHMM_glimmerT_63169-T1 121-308-terminal-1 is invalid.
Couldn't classify 121, 213
Sorry, prediction snap_scaffold_2637-snap.1-T1 fails validation.
(GAC)	 AG	121-213	GT	GGG
(CGA)	 AG	1035-1135	AA	GAA
-recovered snap_scaffold_2637-snap.1-T1, terminal, 1035, 1135
-recovered snap_scaffold_2637-snap.1-T1, internal, 121, 213

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1165
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support