-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_26/scaffold_26_1909260-2157691

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.98487_t
Valid prediction for snap_scaffold_26-snap.410-T1
Valid prediction for snap_scaffold_26-snap.406-T1
Valid prediction for GlimmerHMM_glimmerT_56471-T1
Valid prediction for GeneMark_model.98460_t
Valid prediction for snap_scaffold_26-snap.401-T1
Valid prediction for GeneMark_model.98517_t
Valid prediction for GeneMark_model.98505_t
Valid prediction for GeneMark_model.98530_t
Valid prediction for GeneMark_model.98521_t
Valid prediction for GeneMark_model.98468_t
Valid prediction for GeneMark_model.98462_t
Valid prediction for snap_scaffold_26-snap.417-T1
Valid prediction for snap_scaffold_26-snap.398-T1
Valid prediction for GeneMark_model.98536_t
Valid prediction for GeneMark_model.98485_t
Valid prediction for snap_scaffold_26-snap.425-T1
Valid prediction for GeneMark_model.98506_t
Valid prediction for GeneMark_model.98500_t
Valid prediction for Augustus_model.g37622.t1
Valid prediction for GlimmerHMM_glimmerT_56476-T1
Valid prediction for GeneMark_model.98526_t
Valid prediction for GeneMark_model.98494_t
Valid prediction for snap_scaffold_26-snap.388-T1
Valid prediction for GlimmerHMM_glimmerT_56475-T1
Valid prediction for GeneMark_model.98483_t
Couldn't classify 88158, 88344
Sorry, prediction pasa_asmbl_35260.p1 fails validation.
(ATG)	 TC	83195-83252	GT	AGG
(GTC)	 AG	83907-83960	GT	TGG
(TAA)	 AG	84203-84310	GT	CGG
(ACT)	 AG	84562-84621	GT	AGG
(ATA)	 AG	84731-84752	GT	GGG
(GAT)	 AG	85318-85364	GT	GGG
(ACC)	 AG	86189-86273	GT	AGG
(GAT)	 AG	88158-88344	GG	CAG
-recovered pasa_asmbl_35260.p1, initial, 83195, 83252
-recovered pasa_asmbl_35260.p1, terminal, 84562, 84621
-recovered pasa_asmbl_35260.p1, internal, 83907, 83960
-recovered pasa_asmbl_35260.p1, internal, 84203, 84310
-recovered pasa_asmbl_35260.p1, internal, 84562, 84621
-recovered pasa_asmbl_35260.p1, internal, 84731, 84752
-recovered pasa_asmbl_35260.p1, internal, 85318, 85364
-recovered pasa_asmbl_35260.p1, internal, 86189, 86273
Valid prediction for GeneMark_model.98538_t
Valid prediction for Augustus_model.g37623.t1
Valid prediction for snap_scaffold_26-snap.421-T1
Valid prediction for GeneMark_model.98502_t
Valid prediction for snap_scaffold_26-snap.430-T1
Valid prediction for GeneMark_model.98545_t
Valid prediction for GeneMark_model.98509_t
Valid prediction for Augustus_model.g37625.t1
Valid prediction for GlimmerHMM_glimmerT_56482-T1
Valid prediction for snap_scaffold_26-snap.420-T1
Valid prediction for GlimmerHMM_glimmerT_56492-T1
Valid prediction for GeneMark_model.98476_t
Valid prediction for snap_scaffold_26-snap.387-T1
Valid prediction for GlimmerHMM_glimmerT_56491-T1
Valid prediction for GeneMark_model.98458_t
Valid prediction for snap_scaffold_26-snap.393-T1
Valid prediction for GeneMark_model.98466_t
Valid prediction for GeneMark_model.98464_t
Valid prediction for snap_scaffold_26-snap.436-T1
Valid prediction for snap_scaffold_26-snap.439-T1
Valid prediction for GlimmerHMM_glimmerT_56484-T1
Valid prediction for GeneMark_model.98478_t
Valid prediction for GeneMark_model.98519_t
Valid prediction for snap_scaffold_26-snap.438-T1
Valid prediction for snap_scaffold_26-snap.437-T1
Valid prediction for Augustus_model.g37624.t1
Couldn't classify 14016, 14036
Sorry, prediction GeneMark_model.98452_t fails validation.
(GGA)	 AG	14016-14036	GT	CGG
(AGC)	 AG	14077-14091	GT	GAG
(GGA)	 AG	14161-14244	GT	GTG
(GGT)	 AG	14288-14296	GT	GGG
(GGT)	 AG	14319-14348	GT	GGG
(AGG)	 AG	14437-14703	GT	GCG
(AGC)	 AG	14727-14832	TT	AGT
-recovered GeneMark_model.98452_t, terminal, 14727, 14832
-recovered GeneMark_model.98452_t, internal, 14016, 14036
-recovered GeneMark_model.98452_t, internal, 14077, 14091
-recovered GeneMark_model.98452_t, internal, 14161, 14244
-recovered GeneMark_model.98452_t, internal, 14288, 14296
-recovered GeneMark_model.98452_t, internal, 14319, 14348
-recovered GeneMark_model.98452_t, internal, 14437, 14703
Valid prediction for GeneMark_model.98499_t
Valid prediction for snap_scaffold_26-snap.403-T1
Valid prediction for GeneMark_model.98514_t
Valid prediction for GeneMark_model.98496_t
Valid prediction for snap_scaffold_26-snap.423-T1
Valid prediction for GeneMark_model.98532_t
Valid prediction for snap_scaffold_26-snap.408-T1
Valid prediction for snap_scaffold_26-snap.389-T1
Valid prediction for GeneMark_model.98471_t
Valid prediction for GeneMark_model.98534_t
Valid prediction for GeneMark_model.98522_t
Valid prediction for GeneMark_model.98524_t
Valid prediction for snap_scaffold_26-snap.424-T1
Valid prediction for GeneMark_model.98491_t
Valid prediction for GeneMark_model.98528_t
Valid prediction for GlimmerHMM_glimmerT_56490-T1
Valid prediction for snap_scaffold_26-snap.396-T1
Valid prediction for GeneMark_model.98457_t
Valid prediction for Augustus_model.g37619.t1
Valid prediction for GeneMark_model.98474_t
Valid prediction for GeneMark_model.98542_t
Valid prediction for snap_scaffold_26-snap.412-T1
Valid prediction for GlimmerHMM_glimmerT_56480-T1
Valid prediction for GeneMark_model.98489_t
Couldn't classify 90251, 90374
Sorry, prediction pasa_asmbl_35261.p1 fails validation.
(TGG)	 GC	90251-90374	GT	GGG
(AGT)	 AG	91391-91497	GT	CTG
(GCA)	 AG	91657-91893	GT	GGG
(TTG)	 AG	92021-92072	GT	AGG
(GAA)	 AG	92365-92436	GT	TGG
(TGA)	 AG	92716-92819	GT	AGG
(CCC)	 AG	93285-93350	GT	AGG
(GCT)	 AG	93987-94056	GT	AGG
(GGT)	 AG	95035-95141	GT	AGG
(GTG)	 AG	95276-95362	GT	AGG
(GTT)	 AG	95716-95802	GT	AGG
(ACA)	 AG	95906-96044	GT	GAG
(CTA)	 AG	96268-96395	GT	AGG
(GCG)	 AG	96896-96985	GC	GAG
-recovered pasa_asmbl_35261.p1, terminal, 96896, 96985
-recovered pasa_asmbl_35261.p1, internal, 91391, 91497
-recovered pasa_asmbl_35261.p1, internal, 91657, 91893
-recovered pasa_asmbl_35261.p1, internal, 92021, 92072
-recovered pasa_asmbl_35261.p1, internal, 92365, 92436
-recovered pasa_asmbl_35261.p1, internal, 92716, 92819
-recovered pasa_asmbl_35261.p1, internal, 93285, 93350
-recovered pasa_asmbl_35261.p1, internal, 93987, 94056
-recovered pasa_asmbl_35261.p1, internal, 95035, 95141
-recovered pasa_asmbl_35261.p1, internal, 95276, 95362
-recovered pasa_asmbl_35261.p1, internal, 95716, 95802
-recovered pasa_asmbl_35261.p1, internal, 95906, 96044
-recovered pasa_asmbl_35261.p1, internal, 96268, 96395
-recovered pasa_asmbl_35261.p1, internal, 96896, 96985
Valid prediction for GeneMark_model.98504_t
Valid prediction for snap_scaffold_26-snap.434-T1
Valid prediction for snap_scaffold_26-snap.431-T1
Valid prediction for snap_scaffold_26-snap.392-T1
Valid prediction for snap_scaffold_26-snap.432-T1
Valid prediction for snap_scaffold_26-snap.407-T1
Sorry, intron length (7) is less than minimum required (10)
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.98449_t
Valid prediction for snap_scaffold_26-snap.411-T1
Valid prediction for snap_scaffold_26-snap.395-T1
Valid prediction for snap_scaffold_26-snap.400-T1
Couldn't classify 6184, 6248
Sorry, prediction GeneMark_model.98451_t fails validation.
(ATG)	 GA	3883-3893	GT	TGG
(GTT)	 AG	4131-4157	GT	CGG
(GAG)	 AG	4181-4201	GT	TGG
(GAG)	 AG	4289-4441	GT	GGG
(AGT)	 AG	5196-5207	GT	GAG
(GAG)	 AG	5245-5255	GT	AGG
(TCC)	 AG	5837-5921	GT	GGG
(CGA)	 AG	5962-6042	GT	TTG
(GGA)	 AG	6066-6131	GT	GGG
(GAC)	 AG	6154-6159	GT	GGG
(AGG)	 AG	6184-6248	GT	AGG
-recovered GeneMark_model.98451_t, initial, 3883, 3893
-recovered GeneMark_model.98451_t, internal, 4131, 4157
-recovered GeneMark_model.98451_t, internal, 4181, 4201
-recovered GeneMark_model.98451_t, internal, 4289, 4441
-recovered GeneMark_model.98451_t, internal, 5196, 5207
-recovered GeneMark_model.98451_t, internal, 5245, 5255
-recovered GeneMark_model.98451_t, internal, 5837, 5921
-recovered GeneMark_model.98451_t, internal, 5962, 6042
-recovered GeneMark_model.98451_t, internal, 6066, 6131
-recovered GeneMark_model.98451_t, internal, 6154, 6159
-recovered GeneMark_model.98451_t, internal, 6184, 6248
Valid prediction for GeneMark_model.98481_t
Valid prediction for GeneMark_model.98511_t
Valid prediction for Augustus_model.g37612.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_56488-T1
Valid prediction for snap_scaffold_26-snap.404-T1
Valid prediction for GeneMark_model.98543_t
Valid prediction for snap_scaffold_26-snap.428-T1
Couldn't classify 180021, 180665
Sorry, prediction pasa_asmbl_34708.p1 fails validation.
(TCG)	 AT	180021-180665	GG	AGG
Valid prediction for GeneMark_model.98488_t
Valid prediction for GeneMark_model.98470_t
Valid prediction for GeneMark_model.98495_t
Valid prediction for Augustus_model.g37620.t1
Couldn't classify 195288, 195878
Sorry, prediction pasa_asmbl_34706.p1 fails validation.
(GAG)	 AA	195288-195878	AC	ACA
Valid prediction for snap_scaffold_26-snap.409-T1
Valid prediction for GeneMark_model.98472_t
Valid prediction for GeneMark_model.98448_t
Valid prediction for snap_scaffold_26-snap.416-T1
Valid prediction for GeneMark_model.98482_t
Valid prediction for GeneMark_model.98456_t
Valid prediction for GeneMark_model.98465_t
Valid prediction for snap_scaffold_26-snap.422-T1
Valid prediction for GeneMark_model.98510_t
Valid prediction for GeneMark_model.98525_t
Valid prediction for GeneMark_model.98508_t
Valid prediction for GeneMark_model.98453_t
Valid prediction for GeneMark_model.98486_t
Valid prediction for snap_scaffold_26-snap.402-T1
Valid prediction for GlimmerHMM_glimmerT_56481-T1
Valid prediction for Augustus_model.g37615.t1
Valid prediction for Augustus_model.g37617.t1
Valid prediction for snap_scaffold_26-snap.413-T1
Couldn't classify 216224, 216637
Sorry, prediction pasa_asmbl_34700.p1 fails validation.
(ATG)	 AG	216224-216637	CT	GGC
Valid prediction for GeneMark_model.98454_t
Valid prediction for Augustus_model.g37618.t1
Valid prediction for snap_scaffold_26-snap.391-T1
Valid prediction for snap_scaffold_26-snap.418-T1
Valid prediction for GeneMark_model.98469_t
Valid prediction for GeneMark_model.98523_t
Valid prediction for snap_scaffold_26-snap.405-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GeneMark_model.98535_t
Valid prediction for GeneMark_model.98492_t
Valid prediction for Augustus_model.g37621.t1
Valid prediction for snap_scaffold_26-snap.397-T1
Valid prediction for GeneMark_model.98484_t
Valid prediction for GeneMark_model.98512_t
Valid prediction for GlimmerHMM_glimmerT_56486-T1
Valid prediction for GlimmerHMM_glimmerT_56485-T1
Valid prediction for snap_scaffold_26-snap.429-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.98477_t
Valid prediction for GeneMark_model.98501_t
Valid prediction for GeneMark_model.98480_t
Valid prediction for Augustus_model.g37616.t1
Valid prediction for GlimmerHMM_glimmerT_56474-T1
Valid prediction for GeneMark_model.98490_t
Valid prediction for GeneMark_model.98467_t
Valid prediction for GeneMark_model.98544_t
Valid prediction for GeneMark_model.98450_t
Valid prediction for GeneMark_model.98520_t
Valid prediction for GeneMark_model.98531_t
Valid prediction for snap_scaffold_26-snap.394-T1
Valid prediction for snap_scaffold_26-snap.390-T1
Couldn't classify 138430, 138671
Couldn't classify 146839, 147011
Sorry, prediction pasa_asmbl_34711.p1 fails validation.
(TGT)	 TG	138430-138671	GT	AGG
(GTC)	 AG	138995-139112	GT	AGG
(ATC)	 AG	141509-141595	GT	AGG
(GCC)	 AG	141837-141958	GT	GGG
(CCT)	 AG	142347-142494	GT	TGG
(CTG)	 AG	142767-142827	GT	CTG
(ACC)	 AG	142964-143091	GT	AGG
(TTT)	 AG	143978-144055	GT	TGG
(ACG)	 AG	144720-144811	GT	AGG
(GAA)	 AG	146070-146122	GT	TGG
(CCT)	 AG	146839-147011	AC	CCA
-recovered pasa_asmbl_34711.p1, internal, 138995, 139112
-recovered pasa_asmbl_34711.p1, internal, 141509, 141595
-recovered pasa_asmbl_34711.p1, internal, 141837, 141958
-recovered pasa_asmbl_34711.p1, internal, 142347, 142494
-recovered pasa_asmbl_34711.p1, internal, 142767, 142827
-recovered pasa_asmbl_34711.p1, internal, 142964, 143091
-recovered pasa_asmbl_34711.p1, internal, 143978, 144055
-recovered pasa_asmbl_34711.p1, internal, 144720, 144811
-recovered pasa_asmbl_34711.p1, internal, 146070, 146122
Valid prediction for GeneMark_model.98493_t
Valid prediction for snap_scaffold_26-snap.433-T1
Valid prediction for GlimmerHMM_glimmerT_56472-T1
Valid prediction for snap_scaffold_26-snap.435-T1
Valid prediction for GeneMark_model.98503_t
Valid prediction for GeneMark_model.98461_t
Valid prediction for GeneMark_model.98541_t
Valid prediction for GeneMark_model.98540_t
Valid prediction for Augustus_model.g37613.t1
Valid prediction for GlimmerHMM_glimmerT_56489-T1
Valid prediction for GeneMark_model.98533_t
Valid prediction for GeneMark_model.98539_t
Valid prediction for GlimmerHMM_glimmerT_56477-T1
Valid prediction for GeneMark_model.98515_t
Valid prediction for Augustus_model.g37614.t1
Valid prediction for GlimmerHMM_glimmerT_56478-T1
Valid prediction for snap_scaffold_26-snap.414-T1
Valid prediction for snap_scaffold_26-snap.426-T1
Valid prediction for GlimmerHMM_glimmerT_56483-T1
Valid prediction for GeneMark_model.98473_t
Valid prediction for GeneMark_model.98459_t
Valid prediction for snap_scaffold_26-snap.415-T1
Valid prediction for GeneMark_model.98479_t
Valid prediction for snap_scaffold_26-snap.399-T1
Valid prediction for snap_scaffold_26-snap.419-T1
Valid prediction for GeneMark_model.98475_t
Valid prediction for GlimmerHMM_glimmerT_56479-T1
Valid prediction for GeneMark_model.98498_t
Valid prediction for GeneMark_model.98513_t
Valid prediction for GlimmerHMM_glimmerT_56473-T1
Valid prediction for GlimmerHMM_glimmerT_56487-T1
Valid prediction for GeneMark_model.98529_t
Valid prediction for GeneMark_model.98527_t
Valid prediction for GeneMark_model.98537_t
Valid prediction for GeneMark_model.98516_t
Valid prediction for GeneMark_model.98463_t
Valid prediction for GlimmerHMM_glimmerT_56493-T1
Valid prediction for GeneMark_model.98507_t
Valid prediction for GeneMark_model.98497_t
Valid prediction for snap_scaffold_26-snap.386-T1
Valid prediction for snap_scaffold_26-snap.427-T1
Valid prediction for GeneMark_model.98518_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15919, rend_intergenic: 4369  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40317, rend_intergenic: 36463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64256, rend_intergenic: 50686  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70452, rend_intergenic: 68339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77055, rend_intergenic: 73620  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80397, rend_intergenic: 77447  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96985, rend_intergenic: 86185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107435, rend_intergenic: 100448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134957, rend_intergenic: 108111  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178722, rend_intergenic: 160116  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182684, rend_intergenic: 179467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188650, rend_intergenic: 183491  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199588, rend_intergenic: 188752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206810, rend_intergenic: 200804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215513, rend_intergenic: 207557  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220773, rend_intergenic: 215580  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228931, rend_intergenic: 228528  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234646, rend_intergenic: 229070  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244004, rend_intergenic: 236685  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 117479, rend_intergenic: 117476  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 248432
-exon list size: 1119


building trellis

0.1    
0.2    
0.3    
0.4    
0.4    
0.5    
0.6    
0.7    
0.8    
0.9    
1.0    
1.1    
1.2    
1.2    
1.3    
1.4    
1.5    
1.6    
1.7    
1.8    
1.9    
2.0    
2.1    
2.1    
2.2    
2.3    
2.4    
2.5    
2.6    
2.7    
2.8    
2.9    
2.9    
3.0    
3.1    
3.2    
3.3    
3.4    
3.5    
3.6    
3.7    
3.7    
3.8    
3.9    
4.0    
4.1    
4.2    
4.3    
4.4    
4.5    
4.5    
4.6    
4.7    
4.8    
4.9    
5.0    
5.1    
5.2    
5.3    
5.4    
5.4    
5.5    
5.6    
5.7    
5.8    
5.9    
6.0    
6.1    
6.2    
6.2    
6.3    
6.4    
6.5    
6.6    
6.7    
6.8    
6.9    
7.0    
7.0    
7.1    
7.2    
7.3    
7.4    
7.5    
7.6    
7.7    
7.8    
7.9    
7.9    
8.0    
8.1    
8.2    
8.3    
8.4    
8.5    
8.6    
8.7    
8.7    
8.8    
8.9    
9.0    
9.1    
9.2    
9.3    
9.4    
9.5    
9.5    
9.6    
9.7    
9.8    
9.9    
10.0    
10.1    
10.2    
10.3    
10.3    
10.4    
10.5    
10.6    
10.7    
10.8    
10.9    
11.0    
11.1    
11.2    
11.2    
11.3    
11.4    
11.5    
11.6    
11.7    
11.8    
11.9    
12.0    
12.0    
12.1    
12.2    
12.3    
12.4    
12.5    
12.6    
12.7    
12.8    
12.8    
12.9    
13.0    
13.1    
13.2    
13.3    
13.4    
13.5    
13.6    
13.6    
13.7    
13.8    
13.9    
14.0    
14.1    
14.2    
14.3    
14.4    
14.5    
14.5    
14.6    
14.7    
14.8    
14.9    
15.0    
15.1    
15.2    
15.3    
15.3    
15.4    
15.5    
15.6    
15.7    
15.8    
15.9    
16.0    
16.1    
16.1    
16.2    
16.3    
16.4    
16.5    
16.6    
16.7    
16.8    
16.9    
16.9    
17.0    
17.1    
17.2    
17.3    
17.4    
17.5    
17.6    
17.7    
17.8    
17.8    
17.9    
18.0    
18.1    
18.2    
18.3    
18.4    
18.5    
18.6    
18.6    
18.7    
18.8    
18.9    
19.0    
19.1    
19.2    
19.3    
19.4    
19.4    
19.5    
19.6    
19.7    
19.8    
19.9    
20.0    
20.1    
20.2    
20.2    
20.3    
20.4    
20.5    
20.6    
20.7    
20.8    
20.9    
21.0    
21.1    
21.1    
21.2    
21.3    
21.4    
21.5    
21.6    
21.7    
21.8    
21.9    
21.9    
22.0    
22.1    
22.2    
22.3    
22.4    
22.5    
22.6    
22.7    
22.7    
22.8    
22.9    
23.0    
23.1    
23.2    
23.3    
23.4    
23.5    
23.6    
23.6    
23.7    
23.8    
23.9    
24.0    
24.1    
24.2    
24.3    
24.4    
24.4    
24.5    
24.6    
24.7    
24.8    
24.9    
25.0    
25.1    
25.2    
25.2    
25.3    
25.4    
25.5    
25.6    
25.7    
25.8    
25.9    
26.0    
26.0    
26.1    
26.2    
26.3    
26.4    
26.5    
26.6    
26.7    
26.8    
26.9    
26.9    
27.0    
27.1    
27.2    
27.3    
27.4    
27.5    
27.6    
27.7    
27.7    
27.8    
27.9    
28.0    
28.1    
28.2    
28.3    
28.4    
28.5    
28.5    
28.6    
28.7    
28.8    
28.9    
29.0    
29.1    
29.2    
29.3    
29.3    
29.4    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
30.2    
30.2    
30.3    
30.4    
30.5    
30.6    
30.7    
30.8    
30.9    
31.0    
31.0    
31.1    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
31.8    
31.9    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.6    
32.7    
32.8    
32.9    
33.0    
33.1    
33.2    
33.3    
33.4    
33.5    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.0    
35.1    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.9    
36.0    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.6    
99.7    
99.8    
99.9    
-found 53 predictions from path traversal
Error with prediction: snap lend_intergenic: 15919, rend_intergenic: 4369  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40317, rend_intergenic: 36463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64256, rend_intergenic: 50686  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70452, rend_intergenic: 68339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77055, rend_intergenic: 73620  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80397, rend_intergenic: 77447  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96985, rend_intergenic: 86185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107435, rend_intergenic: 100448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134957, rend_intergenic: 108111  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178722, rend_intergenic: 160116  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182684, rend_intergenic: 179467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188650, rend_intergenic: 183491  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199588, rend_intergenic: 188752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206810, rend_intergenic: 200804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215513, rend_intergenic: 207557  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220773, rend_intergenic: 215580  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228931, rend_intergenic: 228528  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234646, rend_intergenic: 229070  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244004, rend_intergenic: 236685  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 117479, rend_intergenic: 117476  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 16 predictions persist after filtering for low support