-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2586

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_2586-snap.1-T1
Valid prediction for Augustus_model.g42123.t1
Couldn't classify 35, 235
Sorry, prediction GeneMark_model.110441_t fails validation.
(AAG)	 AG	35-235	GT	GGG
(CGC)	 AG	452-616	GT	GAG
(ACA)	 AG	671-731	GG	GAG
add_exon() Sorry, GeneMark_model.110441_t 452-616-terminal-1 is invalid.
-recovered GeneMark_model.110441_t, terminal, 452, 616
-recovered GeneMark_model.110441_t, terminal, 671, 731
-recovered GeneMark_model.110441_t, internal, 35, 235
-recovered GeneMark_model.110441_t, internal, 452, 616

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1187
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support