-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2583

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g42121.t1
Valid prediction for GlimmerHMM_glimmerT_63156-T1
Couldn't classify 32, 49
Sorry, prediction GeneMark_model.110439_t fails validation.
(AGC)	 AG	32-49	GC	AAG
(CTA)	 AG	100-402	GT	AGG
(AGG)	 AG	435-461	GT	AGG
(AGG)	 AG	494-508	GT	TGG
(GAG)	 AG	533-556	GT	TGG
(GAG)	 AG	617-643	GT	TGG
(GAG)	 AG	666-702	GG	GAG
-recovered GeneMark_model.110439_t, terminal, 32, 49
-recovered GeneMark_model.110439_t, terminal, 666, 702
-recovered GeneMark_model.110439_t, internal, 32, 49
-recovered GeneMark_model.110439_t, internal, 100, 402
-recovered GeneMark_model.110439_t, internal, 435, 461
-recovered GeneMark_model.110439_t, internal, 494, 508
-recovered GeneMark_model.110439_t, internal, 533, 556
-recovered GeneMark_model.110439_t, internal, 617, 643
Valid prediction for snap_scaffold_2583-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1189
-exon list size: 18


building trellis

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-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support