-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_25/scaffold_25_9129897-9311538

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_56115-T1
Valid prediction for Augustus_model.g37419.t1
Valid prediction for GlimmerHMM_glimmerT_56111-T1
Valid prediction for GlimmerHMM_glimmerT_56109-T1
Valid prediction for CodingQuarry_transcript_38743-T1
Valid prediction for GlimmerHMM_glimmerT_56097-T1
Valid prediction for snap_scaffold_25-snap.2031-T1
Valid prediction for GeneMark_model.97769_t
Valid prediction for GeneMark_model.97739_t
Valid prediction for snap_scaffold_25-snap.2037-T1
Valid prediction for GeneMark_model.97744_t
Valid prediction for Augustus_model.g37407.t1
Valid prediction for GeneMark_model.97732_t
Valid prediction for Augustus_model.g37404.t1
Valid prediction for snap_scaffold_25-snap.2041-T1
Valid prediction for pasa_asmbl_33793.p1
Valid prediction for HiQ_model.g37405.t1
Valid prediction for snap_scaffold_25-snap.2048-T1
Valid prediction for GeneMark_model.97747_t
Valid prediction for GeneMark_model.97771_t
Valid prediction for snap_scaffold_25-snap.2043-T1
Valid prediction for GeneMark_model.97754_t
Valid prediction for snap_scaffold_25-snap.2039-T1
Valid prediction for GeneMark_model.97761_t
Valid prediction for GeneMark_model.97749_t
Valid prediction for GeneMark_model.97756_t
Valid prediction for GeneMark_model.97766_t
Couldn't classify 155049, 155065
Sorry, prediction pasa_asmbl_33792.p1 fails validation.
(GCC)	 AC	155049-155065	GT	GAG
(GTA)	 AG	155150-155318	GT	AGG
(CAC)	 AG	155475-155594	GT	ATG
(ACG)	 AG	155710-155817	GT	AGG
(GAG)	 AG	156040-156224	GT	TGG
(GCG)	 AG	156480-156684	GT	GAG
-recovered pasa_asmbl_33792.p1, terminal, 156480, 156684
-recovered pasa_asmbl_33792.p1, internal, 155150, 155318
-recovered pasa_asmbl_33792.p1, internal, 155475, 155594
-recovered pasa_asmbl_33792.p1, internal, 155710, 155817
-recovered pasa_asmbl_33792.p1, internal, 156040, 156224
-recovered pasa_asmbl_33792.p1, internal, 156480, 156684
Valid prediction for GlimmerHMM_glimmerT_56105-T1
Valid prediction for snap_scaffold_25-snap.2029-T1
Valid prediction for snap_scaffold_25-snap.2051-T1
Valid prediction for GlimmerHMM_glimmerT_56106-T1
Valid prediction for GeneMark_model.97742_t
Valid prediction for GeneMark_model.97728_t
Valid prediction for GeneMark_model.97746_t
Couldn't classify 34289, 34796
Sorry, prediction pasa_asmbl_33778.p1 fails validation.
(CGG)	 AA	34289-34796	GT	AGG
(AGC)	 AG	35023-35192	GT	AAG
(GGA)	 AG	35517-35645	GT	AGG
(TGT)	 AG	36093-36203	AC	AGA
-recovered pasa_asmbl_33778.p1, terminal, 36093, 36203
-recovered pasa_asmbl_33778.p1, internal, 35023, 35192
-recovered pasa_asmbl_33778.p1, internal, 35517, 35645
Valid prediction for GeneMark_model.97763_t
Valid prediction for snap_scaffold_25-snap.2050-T1
Valid prediction for snap_scaffold_25-snap.2018-T1
Valid prediction for snap_scaffold_25-snap.2027-T1
Valid prediction for Augustus_model.g37410.t1
Valid prediction for CodingQuarry_transcript_38744-T1
Valid prediction for CodingQuarry_transcript_38742-T1
Valid prediction for pasa_asmbl_33788.p1
Valid prediction for snap_scaffold_25-snap.2017-T1
Valid prediction for GlimmerHMM_glimmerT_56114-T1
Couldn't classify 127989, 128882
Sorry, prediction pasa_asmbl_33787.p1 fails validation.
(CCA)	 CC	127989-128882	CT	GAC
Valid prediction for pasa_asmbl_33789.p1
Valid prediction for Augustus_model.g37418.t1
Valid prediction for GeneMark_model.97726_t
Valid prediction for Augustus_model.g37414.t1
Valid prediction for GeneMark_model.97773_t
Valid prediction for GeneMark_model.97764_t
Valid prediction for HiQ_model.g37416.t1
Valid prediction for GeneMark_model.97731_t
Couldn't classify 112787, 113848
Sorry, prediction pasa_asmbl_33782.p1 fails validation.
(CAG)	 AG	112787-113848	AG	AGA
Valid prediction for GeneMark_model.97730_t
Valid prediction for snap_scaffold_25-snap.2035-T1
Valid prediction for GeneMark_model.97751_t
Valid prediction for snap_scaffold_25-snap.2056-T1
Couldn't classify 122294, 122520
Couldn't classify 125341, 125364
Sorry, prediction pasa_asmbl_33783.p1 fails validation.
(CTC)	 GC	122294-122520	GT	AGG
(GCT)	 AG	123165-123367	GT	CGG
(AGC)	 AG	123655-123715	GT	AGG
(AAA)	 AG	123825-123920	GT	CGG
(GTT)	 AG	124039-124194	GT	AGG
(CTT)	 AG	124307-124507	GT	AGG
(CAA)	 AG	124630-124792	GT	AGG
(TGT)	 AG	125341-125364	CT	AGC
-recovered pasa_asmbl_33783.p1, internal, 123165, 123367
-recovered pasa_asmbl_33783.p1, internal, 123655, 123715
-recovered pasa_asmbl_33783.p1, internal, 123825, 123920
-recovered pasa_asmbl_33783.p1, internal, 124039, 124194
-recovered pasa_asmbl_33783.p1, internal, 124307, 124507
-recovered pasa_asmbl_33783.p1, internal, 124630, 124792
Valid prediction for snap_scaffold_25-snap.2060-T1
Valid prediction for snap_scaffold_25-snap.2046-T1
Couldn't classify 150997, 151024
Couldn't classify 154945, 154955
Sorry, prediction pasa_asmbl_33791.p1 fails validation.
(TTC)	 AG	150997-151024	GT	TGG
(CCT)	 AG	151271-151364	GT	AGG
(GTG)	 AG	152038-152085	GT	AGG
(CAT)	 AG	153255-153339	GT	AGG
(GAA)	 AG	153437-153517	GT	GTG
(ATC)	 AG	153621-153655	GT	CGG
(GAA)	 AG	153911-153983	GT	AGG
(GAG)	 AG	154134-154229	GT	AGG
(TTC)	 AG	154365-154483	GT	ACG
(GTA)	 AG	154583-154668	GT	ACG
(TGG)	 AG	154945-154955	GA	GGG
-recovered pasa_asmbl_33791.p1, internal, 150997, 151024
-recovered pasa_asmbl_33791.p1, internal, 151271, 151364
-recovered pasa_asmbl_33791.p1, internal, 152038, 152085
-recovered pasa_asmbl_33791.p1, internal, 153255, 153339
-recovered pasa_asmbl_33791.p1, internal, 153437, 153517
-recovered pasa_asmbl_33791.p1, internal, 153621, 153655
-recovered pasa_asmbl_33791.p1, internal, 153911, 153983
-recovered pasa_asmbl_33791.p1, internal, 154134, 154229
-recovered pasa_asmbl_33791.p1, internal, 154365, 154483
-recovered pasa_asmbl_33791.p1, internal, 154583, 154668
Valid prediction for snap_scaffold_25-snap.2020-T1
Valid prediction for GeneMark_model.97759_t
Valid prediction for GeneMark_model.97736_t
Valid prediction for GlimmerHMM_glimmerT_56101-T1
Valid prediction for GeneMark_model.97767_t
Valid prediction for GeneMark_model.97740_t
Valid prediction for GlimmerHMM_glimmerT_56098-T1
Valid prediction for HiQ_model.g37417.t1
Valid prediction for snap_scaffold_25-snap.2053-T1
Valid prediction for snap_scaffold_25-snap.2028-T1
Valid prediction for GlimmerHMM_glimmerT_56112-T1
Couldn't classify 125464, 125471
Couldn't classify 127073, 127154
Sorry, prediction pasa_asmbl_33785.p1 fails validation.
(CTG)	 AG	125464-125471	GT	AAG
(CAA)	 AG	125588-125704	GT	AAG
(GCT)	 AG	125822-126016	GT	AGG
(GAA)	 AG	127073-127154	CT	CCC
-recovered pasa_asmbl_33785.p1, internal, 125464, 125471
-recovered pasa_asmbl_33785.p1, internal, 125588, 125704
-recovered pasa_asmbl_33785.p1, internal, 125822, 126016

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.97743_t
Valid prediction for snap_scaffold_25-snap.2057-T1
Valid prediction for GeneMark_model.97753_t
Valid prediction for snap_scaffold_25-snap.2052-T1
Valid prediction for GlimmerHMM_glimmerT_56108-T1
Valid prediction for GeneMark_model.97748_t
Couldn't classify 3499, 3675
Sorry, prediction pasa_asmbl_34461.p1 fails validation.
(GGG)	 CC	3499-3675	GT	AGG
(ATG)	 AG	3808-3981	GT	AGG
(AAC)	 AG	4155-4236	GT	AGG
(GCT)	 AG	4379-4527	GT	CTG
(GAC)	 AG	4736-5002	AC	GAA
-recovered pasa_asmbl_34461.p1, initial, 3808, 3981
-recovered pasa_asmbl_34461.p1, terminal, 4736, 5002
-recovered pasa_asmbl_34461.p1, internal, 3808, 3981
-recovered pasa_asmbl_34461.p1, internal, 4155, 4236
-recovered pasa_asmbl_34461.p1, internal, 4379, 4527
Valid prediction for snap_scaffold_25-snap.2030-T1
Valid prediction for GeneMark_model.97770_t
Valid prediction for snap_scaffold_25-snap.2059-T1
Valid prediction for snap_scaffold_25-snap.2023-T1
Valid prediction for snap_scaffold_25-snap.2049-T1
Valid prediction for GlimmerHMM_glimmerT_56102-T1
Valid prediction for GeneMark_model.97768_t
Valid prediction for GeneMark_model.97724_t
Valid prediction for GeneMark_model.97757_t
Valid prediction for snap_scaffold_25-snap.2034-T1
Valid prediction for GeneMark_model.97729_t
Valid prediction for Augustus_model.g37412.t1
Valid prediction for GeneMark_model.97755_t
Valid prediction for GeneMark_model.97745_t
Valid prediction for GlimmerHMM_glimmerT_56110-T1
Valid prediction for snap_scaffold_25-snap.2025-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for GeneMark_model.97738_t
Valid prediction for GeneMark_model.97725_t
Couldn't classify 4736, 4737
Sorry, prediction CodingQuarry_transcript_38745-T1 fails validation.
(ATG)	 AC	3604-3675	GT	AGG
(ATG)	 AG	3808-3981	GT	AGG
(AAC)	 AG	4155-4236	GT	AGG
(TGC)	 AG	4444-4527	GT	CTG
(GAC)	 AG	4736-4737	CT	GAC
-recovered CodingQuarry_transcript_38745-T1, initial, 3604, 3675
-recovered CodingQuarry_transcript_38745-T1, initial, 3808, 3981
-recovered CodingQuarry_transcript_38745-T1, internal, 3808, 3981
-recovered CodingQuarry_transcript_38745-T1, internal, 4155, 4236
-recovered CodingQuarry_transcript_38745-T1, internal, 4444, 4527
Valid prediction for GeneMark_model.97733_t
Valid prediction for Augustus_model.g37420.t1
Valid prediction for GlimmerHMM_glimmerT_56100-T1
Valid prediction for snap_scaffold_25-snap.2036-T1
Valid prediction for GeneMark_model.97750_t
Valid prediction for GlimmerHMM_glimmerT_56099-T1
Valid prediction for GeneMark_model.97765_t
Valid prediction for GeneMark_model.97752_t
Valid prediction for snap_scaffold_25-snap.2047-T1
Valid prediction for snap_scaffold_25-snap.2021-T1
Valid prediction for Augustus_model.g37408.t1
Valid prediction for GlimmerHMM_glimmerT_56107-T1
Valid prediction for GlimmerHMM_glimmerT_56113-T1
Valid prediction for snap_scaffold_25-snap.2042-T1
Valid prediction for snap_scaffold_25-snap.2022-T1
Valid prediction for snap_scaffold_25-snap.2032-T1
Valid prediction for snap_scaffold_25-snap.2019-T1
Valid prediction for snap_scaffold_25-snap.2058-T1
Valid prediction for GeneMark_model.97737_t
Valid prediction for GeneMark_model.97774_t
Valid prediction for Augustus_model.g37409.t1
Valid prediction for GeneMark_model.97741_t
Valid prediction for snap_scaffold_25-snap.2045-T1
Couldn't classify 98037, 98185
Sorry, prediction pasa_asmbl_34607.p1 fails validation.
(GGC)	 GT	98037-98185	GT	AAG
(GCT)	 AG	98549-98617	GT	AGG
(GTG)	 AG	98762-98791	GT	AAG
(GAT)	 AG	99000-99144	GA	AGG
add_exon() Sorry, pasa_asmbl_34607.p1 98762-98791-terminal-1 is invalid.
-recovered pasa_asmbl_34607.p1, terminal, 98762, 98791
-recovered pasa_asmbl_34607.p1, terminal, 99000, 99144
-recovered pasa_asmbl_34607.p1, internal, 98549, 98617
-recovered pasa_asmbl_34607.p1, internal, 98762, 98791
Valid prediction for snap_scaffold_25-snap.2038-T1
Valid prediction for GeneMark_model.97762_t
Valid prediction for snap_scaffold_25-snap.2044-T1
Valid prediction for Augustus_model.g37413.t1
Valid prediction for snap_scaffold_25-snap.2026-T1
Valid prediction for GeneMark_model.97735_t
Valid prediction for snap_scaffold_25-snap.2024-T1
Valid prediction for GeneMark_model.97758_t
Valid prediction for GeneMark_model.97760_t
Valid prediction for GeneMark_model.97723_t
Valid prediction for GeneMark_model.97734_t
Valid prediction for snap_scaffold_25-snap.2040-T1
Valid prediction for Augustus_model.g37406.t1
Valid prediction for CodingQuarry_transcript_38741-T1
Valid prediction for snap_scaffold_25-snap.2055-T1
Valid prediction for snap_scaffold_25-snap.2033-T1
Valid prediction for GlimmerHMM_glimmerT_56104-T1
Valid prediction for snap_scaffold_25-snap.2054-T1
Valid prediction for Augustus_model.g37411.t1
Valid prediction for GeneMark_model.97772_t
Valid prediction for GeneMark_model.97727_t
Valid prediction for GlimmerHMM_glimmerT_56103-T1
Valid prediction for Augustus_model.g37415.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6199, rend_intergenic: 4088  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23253, rend_intergenic: 8389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32837, rend_intergenic: 26602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49570, rend_intergenic: 44462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71731, rend_intergenic: 70461  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85751, rend_intergenic: 82499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89913, rend_intergenic: 85885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92049, rend_intergenic: 89932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95093, rend_intergenic: 93957  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108885, rend_intergenic: 95539  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119597, rend_intergenic: 117403  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122524, rend_intergenic: 119614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130068, rend_intergenic: 123138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140085, rend_intergenic: 136495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161837, rend_intergenic: 145926  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174285, rend_intergenic: 165652  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179707, rend_intergenic: 177064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 181642
-exon list size: 805


building trellis

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45.8    
46.0    
46.1    
46.2    
46.3    
46.5    
46.6    
46.7    
46.8    
47.0    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.8    
48.0    
48.1    
48.2    
48.3    
48.5    
48.6    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.4    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.6    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.4    
51.5    
51.7    
51.8    
51.9    
52.0    
52.2    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.0    
53.2    
53.3    
53.4    
53.5    
53.7    
53.8    
53.9    
54.0    
54.2    
54.3    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.1    
55.3    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.1    
56.3    
56.4    
56.5    
56.6    
56.8    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.7    
59.9    
60.0    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.3    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
62.9    
63.1    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
63.9    
64.1    
64.2    
64.3    
64.4    
64.6    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.0    
66.2    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.5    
67.7    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.1    
70.3    
70.4    
70.5    
70.6    
70.8    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.6    
71.7    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.2    
73.4    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
76.0    
76.1    
76.2    
76.3    
76.5    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.1    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.0    
83.1    
83.3    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.8    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.3    
91.4    
91.6    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.4    
93.6    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.6    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 25 predictions from path traversal
Error with prediction: snap lend_intergenic: 6199, rend_intergenic: 4088  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23253, rend_intergenic: 8389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32837, rend_intergenic: 26602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49570, rend_intergenic: 44462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71731, rend_intergenic: 70461  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85751, rend_intergenic: 82499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89913, rend_intergenic: 85885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92049, rend_intergenic: 89932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95093, rend_intergenic: 93957  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108885, rend_intergenic: 95539  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119597, rend_intergenic: 117403  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122524, rend_intergenic: 119614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130068, rend_intergenic: 123138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140085, rend_intergenic: 136495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161837, rend_intergenic: 145926  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174285, rend_intergenic: 165652  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179707, rend_intergenic: 177064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support