-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_25/scaffold_25_6864488-7060923

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_55744-T1
Valid prediction for snap_scaffold_25-snap.1515-T1
Valid prediction for GlimmerHMM_glimmerT_55745-T1
Valid prediction for GeneMark_model.97167_t
Valid prediction for snap_scaffold_25-snap.1539-T1
Valid prediction for GeneMark_model.97192_t
Valid prediction for snap_scaffold_25-snap.1510-T1
Valid prediction for snap_scaffold_25-snap.1506-T1
Valid prediction for GeneMark_model.97166_t
Valid prediction for snap_scaffold_25-snap.1513-T1
Valid prediction for GlimmerHMM_glimmerT_55750-T1
Valid prediction for GeneMark_model.97190_t
Valid prediction for snap_scaffold_25-snap.1526-T1
Valid prediction for snap_scaffold_25-snap.1533-T1
Valid prediction for snap_scaffold_25-snap.1525-T1
Valid prediction for GlimmerHMM_glimmerT_55730-T1
Valid prediction for GeneMark_model.97201_t
Valid prediction for GeneMark_model.97211_t
Valid prediction for GlimmerHMM_glimmerT_55723-T1
Valid prediction for Augustus_model.g37176.t1
Valid prediction for GeneMark_model.97184_t
Valid prediction for snap_scaffold_25-snap.1493-T1
Valid prediction for snap_scaffold_25-snap.1536-T1
Valid prediction for snap_scaffold_25-snap.1500-T1
Valid prediction for GeneMark_model.97205_t
Valid prediction for GlimmerHMM_glimmerT_55717-T1
Valid prediction for snap_scaffold_25-snap.1524-T1
Valid prediction for GlimmerHMM_glimmerT_55737-T1
Valid prediction for snap_scaffold_25-snap.1529-T1
Valid prediction for GeneMark_model.97213_t
Valid prediction for GlimmerHMM_glimmerT_55738-T1
Valid prediction for GlimmerHMM_glimmerT_55721-T1
Valid prediction for GlimmerHMM_glimmerT_55747-T1
Valid prediction for GeneMark_model.97215_t
Valid prediction for GeneMark_model.97169_t
Valid prediction for GeneMark_model.97171_t
Valid prediction for GeneMark_model.97159_t
Valid prediction for snap_scaffold_25-snap.1504-T1
Valid prediction for snap_scaffold_25-snap.1532-T1
Valid prediction for snap_scaffold_25-snap.1490-T1
Valid prediction for GeneMark_model.97194_t
Valid prediction for snap_scaffold_25-snap.1517-T1
Valid prediction for snap_scaffold_25-snap.1535-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_55725-T1
Valid prediction for Augustus_model.g37179.t1
Valid prediction for GlimmerHMM_glimmerT_55749-T1
Valid prediction for snap_scaffold_25-snap.1495-T1
Valid prediction for Augustus_model.g37188.t1
Valid prediction for Augustus_model.g37181.t1
Valid prediction for snap_scaffold_25-snap.1499-T1
Valid prediction for GeneMark_model.97163_t
Valid prediction for snap_scaffold_25-snap.1498-T1
Valid prediction for GeneMark_model.97198_t
Valid prediction for GeneMark_model.97219_t
Valid prediction for snap_scaffold_25-snap.1534-T1
Valid prediction for GeneMark_model.97165_t
Valid prediction for GeneMark_model.97202_t
Valid prediction for Augustus_model.g37177.t1
Valid prediction for snap_scaffold_25-snap.1497-T1
Valid prediction for snap_scaffold_25-snap.1511-T1
Valid prediction for GlimmerHMM_glimmerT_55751-T1
Valid prediction for GlimmerHMM_glimmerT_55726-T1
Valid prediction for snap_scaffold_25-snap.1523-T1
Valid prediction for GeneMark_model.97179_t
Valid prediction for HiQ_model.g37189.t1
Valid prediction for snap_scaffold_25-snap.1492-T1
Valid prediction for GlimmerHMM_glimmerT_55746-T1
Valid prediction for GlimmerHMM_glimmerT_55748-T1
Valid prediction for GlimmerHMM_glimmerT_55716-T1
Valid prediction for GlimmerHMM_glimmerT_55720-T1
Valid prediction for GlimmerHMM_glimmerT_55752-T1
Valid prediction for snap_scaffold_25-snap.1538-T1
Valid prediction for GeneMark_model.97174_t
Valid prediction for Augustus_model.g37180.t1
Valid prediction for GlimmerHMM_glimmerT_55728-T1
Couldn't classify 158900, 158995
Sorry, prediction pasa_asmbl_33650.p1 fails validation.
(ATG)	 CC	158455-158511	GT	CGG
(TAC)	 AG	158595-158780	GT	AGG
(CCT)	 AG	158900-158995	GG	CTG
-recovered pasa_asmbl_33650.p1, initial, 158455, 158511
-recovered pasa_asmbl_33650.p1, internal, 158595, 158780
Valid prediction for Augustus_model.g37187.t1
Valid prediction for GlimmerHMM_glimmerT_55722-T1
Valid prediction for GeneMark_model.97161_t
Valid prediction for GlimmerHMM_glimmerT_55735-T1
Valid prediction for GlimmerHMM_glimmerT_55734-T1
Valid prediction for snap_scaffold_25-snap.1503-T1
Valid prediction for snap_scaffold_25-snap.1540-T1
Valid prediction for Augustus_model.g37170.t1
Valid prediction for snap_scaffold_25-snap.1521-T1
Valid prediction for GeneMark_model.97218_t
Valid prediction for GeneMark_model.97181_t
Valid prediction for snap_scaffold_25-snap.1519-T1
Valid prediction for pasa_asmbl_33653.p1
Valid prediction for Augustus_model.g37173.t1
Valid prediction for GeneMark_model.97183_t
Valid prediction for GeneMark_model.97209_t
Valid prediction for GlimmerHMM_glimmerT_55713-T1
Valid prediction for GeneMark_model.97188_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_25-snap.1509-T1
Valid prediction for GeneMark_model.97186_t
Valid prediction for GlimmerHMM_glimmerT_55718-T1
Valid prediction for GeneMark_model.97170_t
Valid prediction for snap_scaffold_25-snap.1505-T1
Valid prediction for GeneMark_model.97203_t
Valid prediction for GlimmerHMM_glimmerT_55727-T1
Valid prediction for GlimmerHMM_glimmerT_55739-T1
Valid prediction for GeneMark_model.97175_t
Valid prediction for GeneMark_model.97173_t
Valid prediction for Augustus_model.g37185.t1
Valid prediction for snap_scaffold_25-snap.1501-T1
Valid prediction for snap_scaffold_25-snap.1516-T1
Valid prediction for GeneMark_model.97160_t
Couldn't classify 189225, 189387
Couldn't classify 194646, 194822
Sorry, prediction pasa_asmbl_34349.p1 fails validation.
(GTC)	 AA	189225-189387	GT	CGG
(GGG)	 AG	189875-190108	GT	GGG
(TCA)	 AG	190425-190564	GT	AGG
(GAC)	 AG	193099-193260	GT	AGG
(GGA)	 AG	194646-194822	GC	TGG
-recovered pasa_asmbl_34349.p1, internal, 189875, 190108
-recovered pasa_asmbl_34349.p1, internal, 190425, 190564
-recovered pasa_asmbl_34349.p1, internal, 193099, 193260
-recovered pasa_asmbl_34349.p1, internal, 194646, 194822
Valid prediction for snap_scaffold_25-snap.1491-T1
Valid prediction for Augustus_model.g37174.t1
Valid prediction for snap_scaffold_25-snap.1518-T1
Valid prediction for snap_scaffold_25-snap.1520-T1
Valid prediction for GeneMark_model.97162_t
Valid prediction for GeneMark_model.97180_t
Valid prediction for snap_scaffold_25-snap.1514-T1
Valid prediction for Augustus_model.g37178.t1
Valid prediction for GeneMark_model.97212_t
Valid prediction for Augustus_model.g37172.t1
Valid prediction for GeneMark_model.97158_t
Valid prediction for GeneMark_model.97182_t
Valid prediction for GlimmerHMM_glimmerT_55733-T1
Valid prediction for snap_scaffold_25-snap.1530-T1
Valid prediction for GlimmerHMM_glimmerT_55729-T1
Valid prediction for GlimmerHMM_glimmerT_55731-T1
Valid prediction for Augustus_model.g37183.t1
Valid prediction for GeneMark_model.97206_t
Valid prediction for Augustus_model.g37175.t1
Valid prediction for GeneMark_model.97217_t
Valid prediction for GeneMark_model.97199_t
Valid prediction for GlimmerHMM_glimmerT_55742-T1
Valid prediction for HiQ_model.g37186.t1
Valid prediction for GeneMark_model.97172_t
Valid prediction for GeneMark_model.97207_t
Valid prediction for snap_scaffold_25-snap.1496-T1
Valid prediction for GeneMark_model.97208_t
Valid prediction for GeneMark_model.97197_t
Valid prediction for snap_scaffold_25-snap.1507-T1
Valid prediction for GlimmerHMM_glimmerT_55719-T1
Valid prediction for snap_scaffold_25-snap.1527-T1
Valid prediction for GlimmerHMM_glimmerT_55715-T1
Valid prediction for GlimmerHMM_glimmerT_55736-T1
Valid prediction for Augustus_model.g37184.t1
Valid prediction for Augustus_model.g37169.t1
Valid prediction for GeneMark_model.97189_t
Couldn't classify 46980, 47105
Couldn't classify 48367, 48506
Sorry, prediction pasa_asmbl_34354.p1 fails validation.
(GAT)	 CC	46980-47105	GT	TGG
(CTC)	 AG	48031-48121	GT	AGG
(TGC)	 AG	48367-48506	TG	CGT
-recovered pasa_asmbl_34354.p1, internal, 48031, 48121
Valid prediction for GeneMark_model.97193_t
Valid prediction for GlimmerHMM_glimmerT_55724-T1
Couldn't classify 52698, 52930
Couldn't classify 53916, 54139
Sorry, prediction pasa_asmbl_34352.p2 fails validation.
(AGA)	 CG	52698-52930	GT	AGG
(GTA)	 AG	53252-53394	GT	GAG
(GTG)	 AG	53916-54139	AG	AGA
-recovered pasa_asmbl_34352.p2, internal, 53252, 53394
Valid prediction for GeneMark_model.97210_t
Valid prediction for GeneMark_model.97168_t
Valid prediction for GeneMark_model.97200_t
Valid prediction for snap_scaffold_25-snap.1522-T1
Valid prediction for snap_scaffold_25-snap.1528-T1
Valid prediction for GeneMark_model.97177_t
Valid prediction for GlimmerHMM_glimmerT_55732-T1
Valid prediction for GeneMark_model.97185_t
Valid prediction for Augustus_model.g37167.t1
Valid prediction for GlimmerHMM_glimmerT_55712-T1
Valid prediction for GeneMark_model.97164_t
Valid prediction for GeneMark_model.97187_t
Couldn't classify 49440, 49595
Couldn't classify 51752, 51937
Sorry, prediction pasa_asmbl_34353.p1 fails validation.
(GTG)	 AG	49440-49595	GT	TGG
(TTC)	 AG	49904-50048	GT	TGG
(GCA)	 AG	50199-50353	GT	AGG
(GTT)	 AG	50731-50865	GT	CAG
(TAC)	 AG	51752-51937	GT	AGG
-recovered pasa_asmbl_34353.p1, internal, 49440, 49595
-recovered pasa_asmbl_34353.p1, internal, 49904, 50048
-recovered pasa_asmbl_34353.p1, internal, 50199, 50353
-recovered pasa_asmbl_34353.p1, internal, 50731, 50865
-recovered pasa_asmbl_34353.p1, internal, 51752, 51937
Valid prediction for Augustus_model.g37171.t1
Valid prediction for Augustus_model.g37168.t1
Valid prediction for GlimmerHMM_glimmerT_55740-T1
Valid prediction for GeneMark_model.97191_t
Valid prediction for snap_scaffold_25-snap.1508-T1
Valid prediction for snap_scaffold_25-snap.1494-T1
Valid prediction for GeneMark_model.97214_t
Valid prediction for GeneMark_model.97195_t
Valid prediction for GlimmerHMM_glimmerT_55743-T1
Valid prediction for snap_scaffold_25-snap.1489-T1
Valid prediction for snap_scaffold_25-snap.1537-T1
Valid prediction for snap_scaffold_25-snap.1531-T1
Valid prediction for snap_scaffold_25-snap.1502-T1
Valid prediction for GlimmerHMM_glimmerT_55714-T1
Valid prediction for GeneMark_model.97204_t
Valid prediction for GeneMark_model.97216_t
Valid prediction for snap_scaffold_25-snap.1512-T1
Valid prediction for GlimmerHMM_glimmerT_55741-T1
Valid prediction for Augustus_model.g37182.t1
Couldn't classify 56285, 56404
Sorry, prediction pasa_asmbl_34351.p1 fails validation.
(CTG)	 GG	56285-56404	GT	TGG
(AAG)	 AG	56646-56963	GT	AGG
(AAA)	 AG	57134-57346	GG	GAG
-recovered pasa_asmbl_34351.p1, terminal, 57134, 57346
-recovered pasa_asmbl_34351.p1, internal, 56646, 56963
Valid prediction for GeneMark_model.97176_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10689, rend_intergenic: 4795  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17801, rend_intergenic: 12269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19994, rend_intergenic: 17801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30701, rend_intergenic: 22737  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53545, rend_intergenic: 45436  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62066, rend_intergenic: 54260  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63760, rend_intergenic: 62102  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68580, rend_intergenic: 63791  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71343, rend_intergenic: 68717  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86973, rend_intergenic: 79423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88235, rend_intergenic: 87000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94026, rend_intergenic: 88410  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103875, rend_intergenic: 98118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116929, rend_intergenic: 115024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125105, rend_intergenic: 120750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142555, rend_intergenic: 139091  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143721, rend_intergenic: 143075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146546, rend_intergenic: 143837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178426, rend_intergenic: 176860  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 76253, rend_intergenic: 76250  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 196436
-exon list size: 969


building trellis

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47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 55 predictions from path traversal
Error with prediction: snap lend_intergenic: 10689, rend_intergenic: 4795  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17801, rend_intergenic: 12269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19994, rend_intergenic: 17801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30701, rend_intergenic: 22737  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53545, rend_intergenic: 45436  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62066, rend_intergenic: 54260  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63760, rend_intergenic: 62102  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68580, rend_intergenic: 63791  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71343, rend_intergenic: 68717  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86973, rend_intergenic: 79423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88235, rend_intergenic: 87000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94026, rend_intergenic: 88410  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103875, rend_intergenic: 98118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116929, rend_intergenic: 115024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125105, rend_intergenic: 120750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142555, rend_intergenic: 139091  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143721, rend_intergenic: 143075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146546, rend_intergenic: 143837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178426, rend_intergenic: 176860  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 76253, rend_intergenic: 76250  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 34 predictions persist after filtering for low support