-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_25/scaffold_25_503137-784127

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g36623.t1
Valid prediction for GeneMark_model.95486_t
Valid prediction for Augustus_model.g36627.t1
Valid prediction for Augustus_model.g36634.t1
Valid prediction for Augustus_model.g36640.t1
Valid prediction for snap_scaffold_25-snap.122-T1
Valid prediction for snap_scaffold_25-snap.135-T1
Valid prediction for GlimmerHMM_glimmerT_54795-T1
Valid prediction for snap_scaffold_25-snap.125-T1
Valid prediction for GlimmerHMM_glimmerT_54804-T1
Valid prediction for GeneMark_model.95511_t
Valid prediction for GeneMark_model.95498_t
Valid prediction for GeneMark_model.95435_t
Valid prediction for GeneMark_model.95505_t
Valid prediction for snap_scaffold_25-snap.143-T1
Valid prediction for GeneMark_model.95475_t
Valid prediction for GeneMark_model.95463_t
Couldn't classify 39963, 40084
Couldn't classify 42073, 42189
Sorry, prediction pasa_asmbl_33854.p1 fails validation.
(GAG)	 AG	39963-40084	GT	AGG
(CTA)	 AG	40952-41041	GT	CTG
(CTT)	 AG	41560-41767	GT	AGG
(CTG)	 AG	42073-42189	TC	CCT
-recovered pasa_asmbl_33854.p1, internal, 39963, 40084
-recovered pasa_asmbl_33854.p1, internal, 40952, 41041
-recovered pasa_asmbl_33854.p1, internal, 41560, 41767
Valid prediction for GeneMark_model.95434_t
Valid prediction for Augustus_model.g36642.t1
Valid prediction for snap_scaffold_25-snap.150-T1
Valid prediction for snap_scaffold_25-snap.123-T1
Couldn't classify 209296, 209593
Sorry, prediction GeneMark_model.95493_t fails validation.
(ATG)	 AA	205864-205973	GT	GAG
(GGG)	 AG	205995-206003	GC	AGG
(GGA)	 AG	206029-206193	GT	ATG
(AAG)	 AG	207122-207406	GC	AAG
(AGG)	 AG	208185-208226	GT	AGG
(CGG)	 AG	208255-208353	GT	ATG
(AGG)	 AG	209296-209593	GC	AGG
-recovered GeneMark_model.95493_t, initial, 205864, 205973
-recovered GeneMark_model.95493_t, internal, 205995, 206003
-recovered GeneMark_model.95493_t, internal, 206029, 206193
-recovered GeneMark_model.95493_t, internal, 207122, 207406
-recovered GeneMark_model.95493_t, internal, 208185, 208226
-recovered GeneMark_model.95493_t, internal, 208255, 208353
-recovered GeneMark_model.95493_t, internal, 209296, 209593
Valid prediction for snap_scaffold_25-snap.145-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_25-snap.139-T1
Valid prediction for GeneMark_model.95501_t
Valid prediction for snap_scaffold_25-snap.151-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.95473_t
Valid prediction for GeneMark_model.95468_t
Valid prediction for GeneMark_model.95447_t
Valid prediction for GeneMark_model.95465_t
Valid prediction for GlimmerHMM_glimmerT_54828-T1
Couldn't classify 136156, 136367
Sorry, prediction pasa_asmbl_33334.p1 fails validation.
(ATG)	 AA	135465-135488	GT	CGG
(GAC)	 AG	135653-135818	GT	AGG
(GAC)	 AG	136156-136367	GT	AGG
-recovered pasa_asmbl_33334.p1, initial, 135465, 135488
-recovered pasa_asmbl_33334.p1, internal, 135653, 135818
-recovered pasa_asmbl_33334.p1, internal, 136156, 136367
Couldn't classify 79138, 79504
Sorry, prediction pasa_asmbl_33899.p1 fails validation.
(GGA)	 AG	79138-79504	GT	AGG
(GGC)	 AG	80441-81058	GT	CGG
(GTC)	 AG	83995-84212	GT	AGG
(AAG)	 AG	85489-85759	GT	AGG
(GAA)	 AG	86470-86657	GC	GAG
-recovered pasa_asmbl_33899.p1, terminal, 86470, 86657
-recovered pasa_asmbl_33899.p1, internal, 79138, 79504
-recovered pasa_asmbl_33899.p1, internal, 80441, 81058
-recovered pasa_asmbl_33899.p1, internal, 83995, 84212
-recovered pasa_asmbl_33899.p1, internal, 85489, 85759
-recovered pasa_asmbl_33899.p1, internal, 86470, 86657
Valid prediction for Augustus_model.g36639.t1
Couldn't classify 238267, 238294
Sorry, prediction pasa_asmbl_33913.p1 fails validation.
(CTG)	 GT	238267-238294	GT	TGG
(GAA)	 AG	238691-238749	GT	TTG
(ACG)	 AG	238887-238976	GT	AGG
(GGT)	 AG	239590-239771	GT	AGG
(AGA)	 AG	241095-241191	CC	GAC
-recovered pasa_asmbl_33913.p1, terminal, 241095, 241191
-recovered pasa_asmbl_33913.p1, internal, 238691, 238749
-recovered pasa_asmbl_33913.p1, internal, 238887, 238976
-recovered pasa_asmbl_33913.p1, internal, 239590, 239771
Valid prediction for GeneMark_model.95483_t
Valid prediction for GeneMark_model.95432_t
Valid prediction for Augustus_model.g36641.t1
Valid prediction for snap_scaffold_25-snap.118-T1
Valid prediction for GlimmerHMM_glimmerT_54821-T1
Valid prediction for GlimmerHMM_glimmerT_54825-T1
Valid prediction for snap_scaffold_25-snap.119-T1
Valid prediction for GeneMark_model.95442_t
Valid prediction for snap_scaffold_25-snap.154-T1
Valid prediction for GeneMark_model.95490_t
Valid prediction for GlimmerHMM_glimmerT_54803-T1
Valid prediction for GlimmerHMM_glimmerT_54826-T1
Valid prediction for snap_scaffold_25-snap.130-T1
Valid prediction for GlimmerHMM_glimmerT_54805-T1
Valid prediction for GlimmerHMM_glimmerT_54824-T1
Couldn't classify 795, 1184
Sorry, prediction pasa_asmbl_33327.p1 fails validation.
(CCA)	 CA	795-1184	TA	GAT
Valid prediction for GeneMark_model.95509_t
Valid prediction for GlimmerHMM_glimmerT_54796-T1
Valid prediction for GeneMark_model.95459_t
Valid prediction for snap_scaffold_25-snap.137-T1
Valid prediction for GlimmerHMM_glimmerT_54809-T1
Couldn't classify 42244, 42348
Sorry, prediction pasa_asmbl_33329.p1 fails validation.
(GCC)	 CG	42244-42348	GT	TGG
(CTG)	 AG	43599-43713	GT	AGG
(AGC)	 AG	43999-44180	CC	GAC
-recovered pasa_asmbl_33329.p1, terminal, 43999, 44180
-recovered pasa_asmbl_33329.p1, internal, 43599, 43713
Valid prediction for GlimmerHMM_glimmerT_54790-T1
Valid prediction for GeneMark_model.95453_t
Valid prediction for GeneMark_model.95503_t
Valid prediction for snap_scaffold_25-snap.110-T1
Valid prediction for GeneMark_model.95438_t
Valid prediction for GeneMark_model.95455_t
Couldn't classify 142817, 143464
Sorry, prediction pasa_asmbl_33337.p1 fails validation.
(ATG)	 TC	142817-143464	GG	AAG
Valid prediction for GeneMark_model.95437_t
Valid prediction for GeneMark_model.95495_t
Valid prediction for GeneMark_model.95480_t
Valid prediction for GeneMark_model.95470_t
Valid prediction for GeneMark_model.95445_t
Valid prediction for Augustus_model.g36628.t1
Valid prediction for GlimmerHMM_glimmerT_54820-T1
Valid prediction for GeneMark_model.95472_t
Valid prediction for GeneMark_model.95466_t
Couldn't classify 186037, 186141
Couldn't classify 187690, 187835
Sorry, prediction pasa_asmbl_33342.p1 fails validation.
(TGT)	 TG	186037-186141	GT	AGG
(ACG)	 AG	186465-186565	GT	AGG
(GGT)	 AG	186967-187052	GT	AGG
(CAG)	 AG	187690-187835	GG	CTG
-recovered pasa_asmbl_33342.p1, internal, 186465, 186565
-recovered pasa_asmbl_33342.p1, internal, 186967, 187052
Valid prediction for GeneMark_model.95429_t
Valid prediction for GlimmerHMM_glimmerT_54815-T1
Valid prediction for GeneMark_model.95488_t
Valid prediction for GeneMark_model.95444_t
Valid prediction for Augustus_model.g36636.t1
Valid prediction for snap_scaffold_25-snap.126-T1
Valid prediction for GlimmerHMM_glimmerT_54817-T1
Valid prediction for snap_scaffold_25-snap.128-T1
Valid prediction for GlimmerHMM_glimmerT_54801-T1
Couldn't classify 136631, 136945
Couldn't classify 137950, 138078
Sorry, prediction pasa_asmbl_33335.p1 fails validation.
(AGC)	 AG	136631-136945	GT	AGG
(CAC)	 AG	137246-137359	GT	AGG
(GTG)	 AG	137610-137726	GT	AGG
(GTG)	 AG	137950-138078	CT	TCC
-recovered pasa_asmbl_33335.p1, internal, 136631, 136945
-recovered pasa_asmbl_33335.p1, internal, 137246, 137359
-recovered pasa_asmbl_33335.p1, internal, 137610, 137726
Valid prediction for GlimmerHMM_glimmerT_54802-T1
Valid prediction for snap_scaffold_25-snap.113-T1
Valid prediction for GlimmerHMM_glimmerT_54797-T1
Valid prediction for GlimmerHMM_glimmerT_54811-T1
Valid prediction for snap_scaffold_25-snap.156-T1
Valid prediction for GeneMark_model.95477_t
Valid prediction for GeneMark_model.95431_t
Valid prediction for GeneMark_model.95449_t
Valid prediction for Augustus_model.g36633.t1
Valid prediction for GlimmerHMM_glimmerT_54818-T1
Valid prediction for GlimmerHMM_glimmerT_54799-T1
Valid prediction for GeneMark_model.95457_t
Valid prediction for snap_scaffold_25-snap.124-T1
Valid prediction for GeneMark_model.95481_t
Valid prediction for snap_scaffold_25-snap.115-T1
Valid prediction for GeneMark_model.95479_t
Valid prediction for snap_scaffold_25-snap.127-T1
Valid prediction for GlimmerHMM_glimmerT_54806-T1
Valid prediction for GlimmerHMM_glimmerT_54812-T1
Valid prediction for GlimmerHMM_glimmerT_54808-T1
Valid prediction for GeneMark_model.95451_t
Valid prediction for Augustus_model.g36631.t1
Valid prediction for Augustus_model.g36632.t1
Valid prediction for GeneMark_model.95462_t
Valid prediction for GeneMark_model.95507_t
Valid prediction for snap_scaffold_25-snap.149-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_54816-T1
Valid prediction for snap_scaffold_25-snap.133-T1
Valid prediction for GlimmerHMM_glimmerT_54788-T1
Couldn't classify 123777, 124187
Sorry, prediction pasa_asmbl_33890.p2 fails validation.
(ACG)	 AC	123777-124187	TT	CGT
Valid prediction for GlimmerHMM_glimmerT_54789-T1
Valid prediction for GlimmerHMM_glimmerT_54792-T1
Valid prediction for HiQ_model.g36630.t1
Valid prediction for pasa_asmbl_33990.p1
Valid prediction for GeneMark_model.95433_t
Valid prediction for GeneMark_model.95489_t
Valid prediction for pasa_asmbl_34604.p1
Valid prediction for Augustus_model.g36637.t1
Valid prediction for CodingQuarry_transcript_38550-T1
Valid prediction for HiQ_model.g36635.t1
Valid prediction for GeneMark_model.95452_t
Valid prediction for GeneMark_model.95478_t
Valid prediction for Augustus_model.g36625.t1
Valid prediction for GlimmerHMM_glimmerT_54794-T1
Valid prediction for GeneMark_model.95460_t
Valid prediction for snap_scaffold_25-snap.134-T1
Valid prediction for CodingQuarry_transcript_38552-T1
Valid prediction for GeneMark_model.95500_t
Valid prediction for GlimmerHMM_glimmerT_54819-T1
Valid prediction for GeneMark_model.95504_t
Valid prediction for snap_scaffold_25-snap.152-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.95440_t
Valid prediction for snap_scaffold_25-snap.136-T1
Valid prediction for GeneMark_model.95492_t
Valid prediction for CodingQuarry_transcript_38548-T1
Valid prediction for snap_scaffold_25-snap.112-T1
Valid prediction for snap_scaffold_25-snap.132-T1
Valid prediction for GeneMark_model.95439_t
Valid prediction for GlimmerHMM_glimmerT_54800-T1
Valid prediction for pasa_asmbl_33983.p1
Valid prediction for GeneMark_model.95458_t
Valid prediction for GeneMark_model.95508_t
Valid prediction for snap_scaffold_25-snap.129-T1
Valid prediction for GeneMark_model.95461_t
Valid prediction for GlimmerHMM_glimmerT_54791-T1
Valid prediction for GlimmerHMM_glimmerT_54807-T1
Valid prediction for GeneMark_model.95485_t
Valid prediction for GeneMark_model.95484_t
Valid prediction for snap_scaffold_25-snap.117-T1
Valid prediction for GeneMark_model.95494_t
Valid prediction for GlimmerHMM_glimmerT_54827-T1
Valid prediction for GlimmerHMM_glimmerT_54823-T1
Valid prediction for GeneMark_model.95448_t
Valid prediction for GeneMark_model.95482_t
Valid prediction for Augustus_model.g36626.t1
Valid prediction for snap_scaffold_25-snap.148-T1
Valid prediction for HiQ_model.g36644.t1
Valid prediction for snap_scaffold_25-snap.107-T1
Valid prediction for GeneMark_model.95496_t
Valid prediction for GeneMark_model.95441_t
Couldn't classify 81097, 81131
Sorry, prediction pasa_asmbl_33988.p1 fails validation.
(ATG)	 AG	77888-77954	GT	AGG
(GCC)	 AG	79891-80205	GT	AGG
(ACG)	 AG	81097-81131	CA	CCC
-recovered pasa_asmbl_33988.p1, initial, 77888, 77954
add_exon() Sorry, pasa_asmbl_33988.p1 77888-77954-terminal-3 is invalid.
-recovered pasa_asmbl_33988.p1, terminal, 77888, 77954
-recovered pasa_asmbl_33988.p1, internal, 77888, 77954
-recovered pasa_asmbl_33988.p1, internal, 79891, 80205
Valid prediction for GeneMark_model.95502_t
Valid prediction for Augustus_model.g36621.t1
Valid prediction for snap_scaffold_25-snap.140-T1
Couldn't classify 223206, 223296
Sorry, prediction CodingQuarry_transcript_38549-T1 fails validation.
(ATG)	 TG	221998-222062	GT	GGG
(CAA)	 GG	223206-223296	GT	AGG
(GTC)	 AG	223508-223537	TC	GAT
-recovered CodingQuarry_transcript_38549-T1, initial, 221998, 222062
-recovered CodingQuarry_transcript_38549-T1, terminal, 223508, 223537
Valid prediction for snap_scaffold_25-snap.142-T1
Valid prediction for snap_scaffold_25-snap.116-T1
Valid prediction for snap_scaffold_25-snap.146-T1
Valid prediction for snap_scaffold_25-snap.131-T1
Valid prediction for snap_scaffold_25-snap.147-T1
Valid prediction for GeneMark_model.95487_t
Valid prediction for GeneMark_model.95512_t
Valid prediction for GeneMark_model.95510_t
Valid prediction for GeneMark_model.95450_t
Valid prediction for snap_scaffold_25-snap.109-T1
Valid prediction for GeneMark_model.95436_t
Valid prediction for snap_scaffold_25-snap.111-T1
Valid prediction for GlimmerHMM_glimmerT_54829-T1
Valid prediction for pasa_asmbl_33985.p1
Valid prediction for GlimmerHMM_glimmerT_54793-T1
Valid prediction for GlimmerHMM_glimmerT_54798-T1
Valid prediction for snap_scaffold_25-snap.144-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_25-snap.114-T1
Valid prediction for GeneMark_model.95454_t
Valid prediction for GlimmerHMM_glimmerT_54813-T1
Valid prediction for GeneMark_model.95506_t
Valid prediction for snap_scaffold_25-snap.138-T1
Valid prediction for Augustus_model.g36622.t1
Valid prediction for snap_scaffold_25-snap.108-T1
Valid prediction for GeneMark_model.95499_t
Valid prediction for GlimmerHMM_glimmerT_54810-T1
Valid prediction for GeneMark_model.95430_t
Valid prediction for snap_scaffold_25-snap.121-T1
Valid prediction for Augustus_model.g36643.t1
Valid prediction for GeneMark_model.95474_t
Valid prediction for GeneMark_model.95446_t
Valid prediction for GeneMark_model.95456_t
Valid prediction for snap_scaffold_25-snap.120-T1
Valid prediction for snap_scaffold_25-snap.153-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GeneMark_model.95443_t
Valid prediction for GeneMark_model.95476_t
Valid prediction for GeneMark_model.95491_t
Valid prediction for snap_scaffold_25-snap.141-T1
Valid prediction for snap_scaffold_25-snap.155-T1
Valid prediction for GlimmerHMM_glimmerT_54822-T1
Valid prediction for Augustus_model.g36629.t1
Valid prediction for GeneMark_model.95471_t
Valid prediction for GeneMark_model.95469_t
Valid prediction for HiQ_model.g36624.t1
Valid prediction for GeneMark_model.95467_t
Valid prediction for GlimmerHMM_glimmerT_54814-T1
Valid prediction for GeneMark_model.95464_t
Valid prediction for Augustus_model.g36638.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 30117, rend_intergenic: 26183  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44510, rend_intergenic: 39627  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48905, rend_intergenic: 45936  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51511, rend_intergenic: 49193  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69741, rend_intergenic: 55996  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79262, rend_intergenic: 69775  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88127, rend_intergenic: 80820  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130418, rend_intergenic: 88432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169657, rend_intergenic: 136747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173514, rend_intergenic: 171694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178830, rend_intergenic: 173736  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182114, rend_intergenic: 179765  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203095, rend_intergenic: 184038  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219451, rend_intergenic: 205998  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220943, rend_intergenic: 220329  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 222456, rend_intergenic: 221699  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 235456, rend_intergenic: 222532  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256659, rend_intergenic: 237246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 270217, rend_intergenic: 257210  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 279863, rend_intergenic: 274475  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 280991
-exon list size: 1353


building trellis

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32.0    
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33.0    
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33.1    
33.2    
33.3    
33.4    
33.4    
33.5    
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33.7    
33.7    
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33.9    
34.0    
34.1    
34.2    
34.2    
34.3    
34.4    
34.5    
34.5    
34.6    
34.7    
34.8    
34.8    
34.9    
35.0    
35.1    
35.1    
35.2    
35.3    
35.4    
35.4    
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35.6    
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35.8    
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35.9    
36.0    
36.1    
36.2    
36.2    
36.3    
36.4    
36.5    
36.5    
36.6    
36.7    
36.8    
36.8    
36.9    
37.0    
37.0    
37.1    
37.2    
37.3    
37.3    
37.4    
37.5    
37.6    
37.6    
37.7    
37.8    
37.9    
37.9    
38.0    
38.1    
38.2    
38.2    
38.3    
38.4    
38.5    
38.5    
38.6    
38.7    
38.7    
38.8    
38.9    
39.0    
39.0    
39.1    
39.2    
39.3    
39.3    
39.4    
39.5    
39.6    
39.6    
39.7    
39.8    
39.9    
39.9    
40.0    
40.1    
40.1    
40.2    
40.3    
40.4    
40.4    
40.5    
40.6    
40.7    
40.7    
40.8    
40.9    
41.0    
41.0    
41.1    
41.2    
41.3    
41.3    
41.4    
41.5    
41.5    
41.6    
41.7    
41.8    
41.8    
41.9    
42.0    
42.1    
42.1    
42.2    
42.3    
42.4    
42.4    
42.5    
42.6    
42.7    
42.7    
42.8    
42.9    
43.0    
43.0    
43.1    
43.2    
43.2    
43.3    
43.4    
43.5    
43.5    
43.6    
43.7    
43.8    
43.8    
43.9    
44.0    
44.1    
44.1    
44.2    
44.3    
44.4    
44.4    
44.5    
44.6    
44.6    
44.7    
44.8    
44.9    
44.9    
45.0    
45.1    
45.2    
45.2    
45.3    
45.4    
45.5    
45.5    
45.6    
45.7    
45.8    
45.8    
45.9    
46.0    
46.1    
46.1    
46.2    
46.3    
46.3    
46.4    
46.5    
46.6    
46.6    
46.7    
46.8    
46.9    
46.9    
47.0    
47.1    
47.2    
47.2    
47.3    
47.4    
47.5    
47.5    
47.6    
47.7    
47.7    
47.8    
47.9    
48.0    
48.0    
48.1    
48.2    
48.3    
48.3    
48.4    
48.5    
48.6    
48.6    
48.7    
48.8    
48.9    
48.9    
49.0    
49.1    
49.2    
49.2    
49.3    
49.4    
49.4    
49.5    
49.6    
49.7    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.3    
50.4    
50.5    
50.6    
50.6    
50.7    
50.8    
50.8    
50.9    
51.0    
51.1    
51.1    
51.2    
51.3    
51.4    
51.4    
51.5    
51.6    
51.7    
51.7    
51.8    
51.9    
52.0    
52.0    
52.1    
52.2    
52.3    
52.3    
52.4    
52.5    
52.5    
52.6    
52.7    
52.8    
52.8    
52.9    
53.0    
53.1    
53.1    
53.2    
53.3    
53.4    
53.4    
53.5    
53.6    
53.7    
53.7    
53.8    
53.9    
53.9    
54.0    
54.1    
54.2    
54.2    
54.3    
54.4    
54.5    
54.5    
54.6    
54.7    
54.8    
54.8    
54.9    
55.0    
55.1    
55.1    
55.2    
55.3    
55.4    
55.4    
55.5    
55.6    
55.6    
55.7    
55.8    
55.9    
55.9    
56.0    
56.1    
56.2    
56.2    
56.3    
56.4    
56.5    
56.5    
56.6    
56.7    
56.8    
56.8    
56.9    
57.0    
57.0    
57.1    
57.2    
57.3    
57.3    
57.4    
57.5    
57.6    
57.6    
57.7    
57.8    
57.9    
57.9    
58.0    
58.1    
58.2    
58.2    
58.3    
58.4    
58.5    
58.5    
58.6    
58.7    
58.7    
58.8    
58.9    
59.0    
59.0    
59.1    
59.2    
59.3    
59.3    
59.4    
59.5    
59.6    
59.6    
59.7    
59.8    
59.9    
59.9    
60.0    
60.1    
60.1    
60.2    
60.3    
60.4    
60.4    
60.5    
60.6    
60.7    
60.7    
60.8    
60.9    
61.0    
61.0    
61.1    
61.2    
61.3    
61.3    
61.4    
61.5    
61.5    
61.6    
61.7    
61.8    
61.8    
61.9    
62.0    
62.1    
62.1    
62.2    
62.3    
62.4    
62.4    
62.5    
62.6    
62.7    
62.7    
62.8    
62.9    
63.0    
63.0    
63.1    
63.2    
63.2    
63.3    
63.4    
63.5    
63.5    
63.6    
63.7    
63.8    
63.8    
63.9    
64.0    
64.1    
64.1    
64.2    
64.3    
64.4    
64.4    
64.5    
64.6    
64.6    
64.7    
64.8    
64.9    
64.9    
65.0    
65.1    
65.2    
65.2    
65.3    
65.4    
65.5    
65.5    
65.6    
65.7    
65.8    
65.8    
65.9    
66.0    
66.1    
66.1    
66.2    
66.3    
66.3    
66.4    
66.5    
66.6    
66.6    
66.7    
66.8    
66.9    
66.9    
67.0    
67.1    
67.2    
67.2    
67.3    
67.4    
67.5    
67.5    
67.6    
67.7    
67.7    
67.8    
67.9    
68.0    
68.0    
68.1    
68.2    
68.3    
68.3    
68.4    
68.5    
68.6    
68.6    
68.7    
68.8    
68.9    
68.9    
69.0    
69.1    
69.2    
69.2    
69.3    
69.4    
69.4    
69.5    
69.6    
69.7    
69.7    
69.8    
69.9    
70.0    
70.0    
70.1    
70.2    
70.3    
70.3    
70.4    
70.5    
70.6    
70.6    
70.7    
70.8    
70.8    
70.9    
71.0    
71.1    
71.1    
71.2    
71.3    
71.4    
71.4    
71.5    
71.6    
71.7    
71.7    
71.8    
71.9    
72.0    
72.0    
72.1    
72.2    
72.3    
72.3    
72.4    
72.5    
72.5    
72.6    
72.7    
72.8    
72.8    
72.9    
73.0    
73.1    
73.1    
73.2    
73.3    
73.4    
73.4    
73.5    
73.6    
73.7    
73.7    
73.8    
73.9    
73.9    
74.0    
74.1    
74.2    
74.2    
74.3    
74.4    
74.5    
74.5    
74.6    
74.7    
74.8    
74.8    
74.9    
75.0    
75.1    
75.1    
75.2    
75.3    
75.4    
75.4    
75.5    
75.6    
75.6    
75.7    
75.8    
75.9    
75.9    
76.0    
76.1    
76.2    
76.2    
76.3    
76.4    
76.5    
76.5    
76.6    
76.7    
76.8    
76.8    
76.9    
77.0    
77.0    
77.1    
77.2    
77.3    
77.3    
77.4    
77.5    
77.6    
77.6    
77.7    
77.8    
77.9    
77.9    
78.0    
78.1    
78.2    
78.2    
78.3    
78.4    
78.5    
78.5    
78.6    
78.7    
78.7    
78.8    
78.9    
79.0    
79.0    
79.1    
79.2    
79.3    
79.3    
79.4    
79.5    
79.6    
79.6    
79.7    
79.8    
79.9    
79.9    
80.0    
80.1    
80.1    
80.2    
80.3    
80.4    
80.4    
80.5    
80.6    
80.7    
80.7    
80.8    
80.9    
81.0    
81.0    
81.1    
81.2    
81.3    
81.3    
81.4    
81.5    
81.5    
81.6    
81.7    
81.8    
81.8    
81.9    
82.0    
82.1    
82.1    
82.2    
82.3    
82.4    
82.4    
82.5    
82.6    
82.7    
82.7    
82.8    
82.9    
83.0    
83.0    
83.1    
83.2    
83.2    
83.3    
83.4    
83.5    
83.5    
83.6    
83.7    
83.8    
83.8    
83.9    
84.0    
84.1    
84.1    
84.2    
84.3    
84.4    
84.4    
84.5    
84.6    
84.6    
84.7    
84.8    
84.9    
84.9    
85.0    
85.1    
85.2    
85.2    
85.3    
85.4    
85.5    
85.5    
85.6    
85.7    
85.8    
85.8    
85.9    
86.0    
86.1    
86.1    
86.2    
86.3    
86.3    
86.4    
86.5    
86.6    
86.6    
86.7    
86.8    
86.9    
86.9    
87.0    
87.1    
87.2    
87.2    
87.3    
87.4    
87.5    
87.5    
87.6    
87.7    
87.7    
87.8    
87.9    
88.0    
88.0    
88.1    
88.2    
88.3    
88.3    
88.4    
88.5    
88.6    
88.6    
88.7    
88.8    
88.9    
88.9    
89.0    
89.1    
89.2    
89.2    
89.3    
89.4    
89.4    
89.5    
89.6    
89.7    
89.7    
89.8    
89.9    
90.0    
90.0    
90.1    
90.2    
90.3    
90.3    
90.4    
90.5    
90.6    
90.6    
90.7    
90.8    
90.8    
90.9    
91.0    
91.1    
91.1    
91.2    
91.3    
91.4    
91.4    
91.5    
91.6    
91.7    
91.7    
91.8    
91.9    
92.0    
92.0    
92.1    
92.2    
92.3    
92.3    
92.4    
92.5    
92.5    
92.6    
92.7    
92.8    
92.8    
92.9    
93.0    
93.1    
93.1    
93.2    
93.3    
93.4    
93.4    
93.5    
93.6    
93.7    
93.7    
93.8    
93.9    
93.9    
94.0    
94.1    
94.2    
94.2    
94.3    
94.4    
94.5    
94.5    
94.6    
94.7    
94.8    
94.8    
94.9    
95.0    
95.1    
95.1    
95.2    
95.3    
95.4    
95.4    
95.5    
95.6    
95.6    
95.7    
95.8    
95.9    
95.9    
96.0    
96.1    
96.2    
96.2    
96.3    
96.4    
96.5    
96.5    
96.6    
96.7    
96.8    
96.8    
96.9    
97.0    
97.0    
97.1    
97.2    
97.3    
97.3    
97.4    
97.5    
97.6    
97.6    
97.7    
97.8    
97.9    
97.9    
98.0    
98.1    
98.2    
98.2    
98.3    
98.4    
98.5    
98.5    
98.6    
98.7    
98.7    
98.8    
98.9    
99.0    
99.0    
99.1    
99.2    
99.3    
99.3    
99.4    
99.5    
99.6    
99.6    
99.7    
99.8    
99.9    
99.9    
-found 65 predictions from path traversal
Error with prediction: snap lend_intergenic: 30117, rend_intergenic: 26183  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44510, rend_intergenic: 39627  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48905, rend_intergenic: 45936  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51511, rend_intergenic: 49193  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69741, rend_intergenic: 55996  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79262, rend_intergenic: 69775  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88127, rend_intergenic: 80820  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130418, rend_intergenic: 88432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169657, rend_intergenic: 136747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173514, rend_intergenic: 171694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178830, rend_intergenic: 173736  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182114, rend_intergenic: 179765  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203095, rend_intergenic: 184038  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219451, rend_intergenic: 205998  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220943, rend_intergenic: 220329  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 222456, rend_intergenic: 221699  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 235456, rend_intergenic: 222532  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256659, rend_intergenic: 237246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 270217, rend_intergenic: 257210  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 279863, rend_intergenic: 274475  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 37 predictions persist after filtering for low support