-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_25/scaffold_25_4868863-5093920

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_25-snap.1043-T1
Valid prediction for snap_scaffold_25-snap.1078-T1
Valid prediction for Augustus_model.g36948.t1
Valid prediction for GeneMark_model.96707_t
Valid prediction for Augustus_model.g36963.t1
Valid prediction for GeneMark_model.96717_t
Valid prediction for GeneMark_model.96720_t
Valid prediction for snap_scaffold_25-snap.1080-T1
Valid prediction for GeneMark_model.96705_t
Valid prediction for GeneMark_model.96696_t
Valid prediction for CodingQuarry_transcript_38637-T1
Valid prediction for GlimmerHMM_glimmerT_55387-T1
Valid prediction for GeneMark_model.96738_t
Valid prediction for GlimmerHMM_glimmerT_55391-T1
Valid prediction for snap_scaffold_25-snap.1069-T1
Valid prediction for snap_scaffold_25-snap.1086-T1
Valid prediction for snap_scaffold_25-snap.1041-T1
Valid prediction for pasa_asmbl_33552.p1
Valid prediction for GeneMark_model.96745_t
Valid prediction for snap_scaffold_25-snap.1071-T1
Valid prediction for Augustus_model.g36951.t1
Valid prediction for GeneMark_model.96700_t
Valid prediction for snap_scaffold_25-snap.1073-T1
Valid prediction for Augustus_model.g36965.t1
Valid prediction for snap_scaffold_25-snap.1040-T1
Valid prediction for snap_scaffold_25-snap.1047-T1
Valid prediction for GeneMark_model.96690_t
Valid prediction for snap_scaffold_25-snap.1085-T1
Valid prediction for snap_scaffold_25-snap.1067-T1
Valid prediction for GeneMark_model.96743_t
Valid prediction for snap_scaffold_25-snap.1057-T1
Valid prediction for GlimmerHMM_glimmerT_55401-T1
Valid prediction for GlimmerHMM_glimmerT_55403-T1
Valid prediction for HiQ_model.g36966.t1
Valid prediction for Augustus_model.g36954.t1
Valid prediction for snap_scaffold_25-snap.1052-T1
Valid prediction for GeneMark_model.96735_t
Valid prediction for GlimmerHMM_glimmerT_55394-T1
Valid prediction for GeneMark_model.96721_t
Valid prediction for GeneMark_model.96709_t
Couldn't classify 128128, 128214
Sorry, prediction pasa_asmbl_33548.p1 fails validation.
(CCC)	 GT	128128-128214	GT	AGG
(AGG)	 AG	128395-128500	GT	CAG
(TTC)	 AG	128747-128820	GT	CGG
(CTG)	 AG	128971-129131	GT	GGG
(TCT)	 AG	129660-129811	GT	CTG
(GTG)	 AG	129909-130159	TT	GAT
-recovered pasa_asmbl_33548.p1, terminal, 129909, 130159
-recovered pasa_asmbl_33548.p1, internal, 128395, 128500
-recovered pasa_asmbl_33548.p1, internal, 128747, 128820
-recovered pasa_asmbl_33548.p1, internal, 128971, 129131
-recovered pasa_asmbl_33548.p1, internal, 129660, 129811
Valid prediction for GeneMark_model.96725_t
Valid prediction for GeneMark_model.96692_t
Valid prediction for snap_scaffold_25-snap.1081-T1
Valid prediction for GlimmerHMM_glimmerT_55415-T1
Valid prediction for GeneMark_model.96710_t
Valid prediction for GeneMark_model.96729_t
Valid prediction for GlimmerHMM_glimmerT_55420-T1
Valid prediction for GeneMark_model.96724_t
Valid prediction for GlimmerHMM_glimmerT_55417-T1
Valid prediction for snap_scaffold_25-snap.1046-T1
Valid prediction for GlimmerHMM_glimmerT_55390-T1
Valid prediction for CodingQuarry_transcript_38635-T1
Valid prediction for GeneMark_model.96702_t
Valid prediction for GeneMark_model.96733_t
Valid prediction for snap_scaffold_25-snap.1076-T1
Valid prediction for GeneMark_model.96727_t
Valid prediction for GeneMark_model.96737_t
Valid prediction for GeneMark_model.96732_t
Valid prediction for CodingQuarry_transcript_38634-T1
Valid prediction for GlimmerHMM_glimmerT_55406-T1
Valid prediction for GlimmerHMM_glimmerT_55414-T1
Valid prediction for HiQ_model.g36964.t1
Valid prediction for snap_scaffold_25-snap.1058-T1
Valid prediction for GlimmerHMM_glimmerT_55397-T1
Valid prediction for GeneMark_model.96698_t
Valid prediction for GeneMark_model.96694_t
Valid prediction for GeneMark_model.96723_t
Valid prediction for GlimmerHMM_glimmerT_55413-T1
Valid prediction for snap_scaffold_25-snap.1068-T1
Valid prediction for snap_scaffold_25-snap.1082-T1
Valid prediction for Augustus_model.g36957.t1
Valid prediction for GeneMark_model.96713_t
Valid prediction for snap_scaffold_25-snap.1055-T1
Valid prediction for Augustus_model.g36970.t1
Valid prediction for GeneMark_model.96740_t
Valid prediction for snap_scaffold_25-snap.1045-T1
Valid prediction for pasa_asmbl_33557.p1
Valid prediction for GeneMark_model.96718_t
Valid prediction for GlimmerHMM_glimmerT_55411-T1
Valid prediction for GlimmerHMM_glimmerT_55407-T1
Valid prediction for snap_scaffold_25-snap.1064-T1
Valid prediction for snap_scaffold_25-snap.1049-T1
Valid prediction for snap_scaffold_25-snap.1089-T1
Valid prediction for GlimmerHMM_glimmerT_55398-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_55419-T1
Valid prediction for GeneMark_model.96730_t
Valid prediction for snap_scaffold_25-snap.1054-T1
Valid prediction for GlimmerHMM_glimmerT_55404-T1
Valid prediction for GlimmerHMM_glimmerT_55410-T1
Valid prediction for GeneMark_model.96744_t
Valid prediction for GeneMark_model.96739_t
Valid prediction for GeneMark_model.96746_t
Valid prediction for snap_scaffold_25-snap.1063-T1
Valid prediction for snap_scaffold_25-snap.1083-T1
Valid prediction for GlimmerHMM_glimmerT_55422-T1
Valid prediction for GeneMark_model.96706_t
Valid prediction for GeneMark_model.96734_t
Valid prediction for Augustus_model.g36959.t1
Valid prediction for Augustus_model.g36949.t1
Valid prediction for snap_scaffold_25-snap.1084-T1
Valid prediction for snap_scaffold_25-snap.1077-T1
Valid prediction for snap_scaffold_25-snap.1062-T1
Valid prediction for GeneMark_model.96703_t
Valid prediction for GeneMark_model.96691_t
Valid prediction for snap_scaffold_25-snap.1048-T1
Valid prediction for GeneMark_model.96719_t
Valid prediction for snap_scaffold_25-snap.1074-T1
Valid prediction for GlimmerHMM_glimmerT_55405-T1
Valid prediction for Augustus_model.g36968.t1
Valid prediction for GeneMark_model.96741_t
Valid prediction for GeneMark_model.96715_t
Valid prediction for GlimmerHMM_glimmerT_55412-T1
Valid prediction for snap_scaffold_25-snap.1070-T1
Valid prediction for GlimmerHMM_glimmerT_55399-T1
Valid prediction for GlimmerHMM_glimmerT_55418-T1
Valid prediction for snap_scaffold_25-snap.1072-T1
Valid prediction for snap_scaffold_25-snap.1042-T1
Valid prediction for GeneMark_model.96695_t
Valid prediction for snap_scaffold_25-snap.1061-T1
Valid prediction for Augustus_model.g36950.t1
Valid prediction for Augustus_model.g36958.t1
Valid prediction for GeneMark_model.96697_t
Valid prediction for snap_scaffold_25-snap.1060-T1
Valid prediction for GlimmerHMM_glimmerT_55393-T1
Valid prediction for GeneMark_model.96726_t
Valid prediction for snap_scaffold_25-snap.1053-T1
Valid prediction for Augustus_model.g36956.t1
Valid prediction for Augustus_model.g36960.t1
Valid prediction for Augustus_model.g36955.t1
Valid prediction for GeneMark_model.96693_t
Valid prediction for GlimmerHMM_glimmerT_55392-T1
Valid prediction for GlimmerHMM_glimmerT_55389-T1
Valid prediction for GeneMark_model.96701_t
Valid prediction for GeneMark_model.96711_t
Valid prediction for Augustus_model.g36961.t1
Valid prediction for snap_scaffold_25-snap.1059-T1
Valid prediction for GeneMark_model.96712_t
Valid prediction for Augustus_model.g36969.t1
Valid prediction for snap_scaffold_25-snap.1088-T1
Valid prediction for GeneMark_model.96716_t
Valid prediction for snap_scaffold_25-snap.1090-T1
Valid prediction for snap_scaffold_25-snap.1050-T1
Valid prediction for GlimmerHMM_glimmerT_55409-T1
Valid prediction for GlimmerHMM_glimmerT_55388-T1
Valid prediction for GeneMark_model.96742_t
Valid prediction for snap_scaffold_25-snap.1079-T1
Valid prediction for Augustus_model.g36967.t1
Valid prediction for GeneMark_model.96736_t
Valid prediction for Augustus_model.g36953.t1
Valid prediction for Augustus_model.g36962.t1
Couldn't classify 23003, 23065
Sorry, prediction pasa_asmbl_34218.p1 fails validation.
(AGC)	 GC	23003-23065	GT	AGG
(GTG)	 AG	23193-23369	GT	AGG
(GCC)	 AG	23511-24326	AG	GAA
-recovered pasa_asmbl_34218.p1, terminal, 23511, 24326
-recovered pasa_asmbl_34218.p1, internal, 23193, 23369
Valid prediction for Augustus_model.g36952.t1
Valid prediction for GlimmerHMM_glimmerT_55395-T1
Valid prediction for GlimmerHMM_glimmerT_55400-T1
Valid prediction for snap_scaffold_25-snap.1044-T1
Valid prediction for GlimmerHMM_glimmerT_55421-T1
Valid prediction for snap_scaffold_25-snap.1065-T1
Valid prediction for snap_scaffold_25-snap.1075-T1
Valid prediction for GeneMark_model.96708_t
Valid prediction for GeneMark_model.96728_t
Valid prediction for GlimmerHMM_glimmerT_55423-T1
Valid prediction for Augustus_model.g36971.t1
Valid prediction for snap_scaffold_25-snap.1087-T1
Valid prediction for snap_scaffold_25-snap.1051-T1
Couldn't classify 5983, 6102
Sorry, prediction pasa_asmbl_34219.p1 fails validation.
(CTT)	 AA	5983-6102	GT	TGG
(GTT)	 AG	6397-6536	GT	ACG
(TGC)	 AG	6663-6786	GT	AAG
(CGT)	 AG	6901-7016	GT	AAG
(GAG)	 AG	7400-7555	GT	AGG
(GGT)	 AG	7658-7766	GT	AGG
(ACC)	 AG	7962-8127	GT	AGG
(GAA)	 AG	8228-8298	GT	CTG
(GAC)	 AG	8523-8723	GT	AGG
(CAC)	 AG	8831-8993	GT	ATG
(CTA)	 AG	9264-9472	GT	AGG
(AGC)	 AG	9722-9895	GC	GAG
-recovered pasa_asmbl_34219.p1, terminal, 9722, 9895
-recovered pasa_asmbl_34219.p1, internal, 6397, 6536
-recovered pasa_asmbl_34219.p1, internal, 6663, 6786
-recovered pasa_asmbl_34219.p1, internal, 6901, 7016
-recovered pasa_asmbl_34219.p1, internal, 7400, 7555
-recovered pasa_asmbl_34219.p1, internal, 7658, 7766
-recovered pasa_asmbl_34219.p1, internal, 7962, 8127
-recovered pasa_asmbl_34219.p1, internal, 8228, 8298
-recovered pasa_asmbl_34219.p1, internal, 8523, 8723
-recovered pasa_asmbl_34219.p1, internal, 8831, 8993
-recovered pasa_asmbl_34219.p1, internal, 9264, 9472
-recovered pasa_asmbl_34219.p1, internal, 9722, 9895
Valid prediction for GeneMark_model.96714_t
Valid prediction for GlimmerHMM_glimmerT_55408-T1
Valid prediction for GlimmerHMM_glimmerT_55402-T1
Valid prediction for GeneMark_model.96722_t
Valid prediction for GlimmerHMM_glimmerT_55396-T1
Valid prediction for snap_scaffold_25-snap.1056-T1
Valid prediction for snap_scaffold_25-snap.1066-T1
Valid prediction for GlimmerHMM_glimmerT_55416-T1
Valid prediction for GeneMark_model.96699_t
Valid prediction for GeneMark_model.96704_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 13025, rend_intergenic: 10130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14455, rend_intergenic: 13115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16252, rend_intergenic: 14708  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32035, rend_intergenic: 22352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32548, rend_intergenic: 32069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51842, rend_intergenic: 33142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56209, rend_intergenic: 55359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58920, rend_intergenic: 56323  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62150, rend_intergenic: 60677  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76856, rend_intergenic: 67114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89447, rend_intergenic: 80894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111598, rend_intergenic: 108359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120834, rend_intergenic: 111751  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122100, rend_intergenic: 121087  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131672, rend_intergenic: 128254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137815, rend_intergenic: 134343  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146989, rend_intergenic: 140124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150108, rend_intergenic: 147512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153806, rend_intergenic: 150161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160272, rend_intergenic: 157289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193364, rend_intergenic: 177805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205567, rend_intergenic: 200733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 66257, rend_intergenic: 66254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 225058
-exon list size: 927


building trellis

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49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 49 predictions from path traversal
Error with prediction: snap lend_intergenic: 13025, rend_intergenic: 10130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14455, rend_intergenic: 13115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16252, rend_intergenic: 14708  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32035, rend_intergenic: 22352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32548, rend_intergenic: 32069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51842, rend_intergenic: 33142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56209, rend_intergenic: 55359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58920, rend_intergenic: 56323  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62150, rend_intergenic: 60677  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76856, rend_intergenic: 67114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89447, rend_intergenic: 80894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111598, rend_intergenic: 108359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120834, rend_intergenic: 111751  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122100, rend_intergenic: 121087  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131672, rend_intergenic: 128254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137815, rend_intergenic: 134343  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146989, rend_intergenic: 140124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150108, rend_intergenic: 147512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153806, rend_intergenic: 150161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160272, rend_intergenic: 157289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193364, rend_intergenic: 177805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205567, rend_intergenic: 200733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 66257, rend_intergenic: 66254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 31 predictions persist after filtering for low support