-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_25/scaffold_25_4499198-4700949 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.96644_t Couldn't classify 44706, 44750 Sorry, prediction pasa_asmbl_33512.p1 fails validation. (ATG) AG 44035-44421 GT TCG (AAC) AG 44706-44750 CC CCC -recovered pasa_asmbl_33512.p1, initial, 44035, 44421 -recovered pasa_asmbl_33512.p1, internal, 44035, 44421 Valid prediction for CodingQuarry_transcript_38624-T1 Valid prediction for HiQ_model.g36907.t1 Valid prediction for GeneMark_model.96618_t Valid prediction for snap_scaffold_25-snap.984-T1 Valid prediction for GeneMark_model.96612_t Valid prediction for snap_scaffold_25-snap.957-T1 Valid prediction for GlimmerHMM_glimmerT_55353-T1 Valid prediction for snap_scaffold_25-snap.983-T1 Couldn't classify 14178, 14338 Sorry, prediction pasa_asmbl_33506.p1 fails validation. (GTG) AG 14178-14338 GT GTG (GTA) AG 15011-15226 GT AGG (CAT) AG 16097-16268 GT AGG (GGC) AG 16730-16771 GT GGG (ACG) AG 16878-16976 CA AGC -recovered pasa_asmbl_33506.p1, terminal, 16878, 16976 -recovered pasa_asmbl_33506.p1, internal, 14178, 14338 -recovered pasa_asmbl_33506.p1, internal, 15011, 15226 -recovered pasa_asmbl_33506.p1, internal, 16097, 16268 -recovered pasa_asmbl_33506.p1, internal, 16730, 16771 Valid prediction for snap_scaffold_25-snap.972-T1 Valid prediction for snap_scaffold_25-snap.962-T1 Valid prediction for GeneMark_model.96606_t Valid prediction for Augustus_model.g36906.t1 Valid prediction for GlimmerHMM_glimmerT_55343-T1 Valid prediction for Augustus_model.g36921.t1 Valid prediction for GeneMark_model.96636_t Valid prediction for pasa_asmbl_33507.p1 Valid prediction for GlimmerHMM_glimmerT_55347-T1 Valid prediction for snap_scaffold_25-snap.986-T1 Valid prediction for snap_scaffold_25-snap.970-T1 Valid prediction for CodingQuarry_transcript_38618-T1 Valid prediction for GeneMark_model.96642_t Valid prediction for CodingQuarry_transcript_38625-T1 Valid prediction for snap_scaffold_25-snap.981-T1 Valid prediction for GlimmerHMM_glimmerT_55328-T1 Valid prediction for GeneMark_model.96634_t Valid prediction for snap_scaffold_25-snap.955-T1 Valid prediction for HiQ_model.g36916.t1 Valid prediction for GeneMark_model.96638_t Valid prediction for GeneMark_model.96601_t Valid prediction for snap_scaffold_25-snap.973-T1 Valid prediction for Augustus_model.g36908.t1 Valid prediction for GeneMark_model.96630_t Valid prediction for GeneMark_model.96620_t Valid prediction for GlimmerHMM_glimmerT_55333-T1 Valid prediction for GeneMark_model.96599_t Valid prediction for GlimmerHMM_glimmerT_55327-T1 Valid prediction for Augustus_model.g36913.t1 Valid prediction for snap_scaffold_25-snap.961-T1 Valid prediction for Augustus_model.g36925.t1 Valid prediction for GeneMark_model.96616_t Valid prediction for GlimmerHMM_glimmerT_55351-T1 Valid prediction for snap_scaffold_25-snap.963-T1 Couldn't classify 71130, 71154 Sorry, prediction pasa_asmbl_33515.p1 fails validation. (GAG) GA 71130-71154 GT GGG (ATA) AG 71395-71505 GT AGG (ACA) AG 71783-71915 GT AAG (CCT) AG 74349-74487 GT AGG (GAG) AG 74603-74699 GT CAG (TCC) AG 74785-74901 GT GGG (ACG) AG 75110-75237 GT AGG (ACG) AG 75364-75525 GT GGG (GGG) AG 75800-75952 GT AGG (GAA) AG 76038-76164 GT GGG (AAA) AG 76354-76409 GT TTG (TTT) AG 76507-76581 GT AGG (CTG) AG 76843-76980 GT AAG (ATG) AG 77474-77721 GT AGG (GGA) AG 77948-78470 GT AGG (GAC) AG 78609-78800 GT AGG (ACA) AG 79031-79162 GT AGG (CAT) AG 81222-81332 GT AGG (AGA) AG 81482-82204 GC AGG -recovered pasa_asmbl_33515.p1, initial, 77474, 77721 -recovered pasa_asmbl_33515.p1, terminal, 81482, 82204 -recovered pasa_asmbl_33515.p1, internal, 71395, 71505 -recovered pasa_asmbl_33515.p1, internal, 71783, 71915 -recovered pasa_asmbl_33515.p1, internal, 74349, 74487 -recovered pasa_asmbl_33515.p1, internal, 74603, 74699 -recovered pasa_asmbl_33515.p1, internal, 74785, 74901 -recovered pasa_asmbl_33515.p1, internal, 75110, 75237 -recovered pasa_asmbl_33515.p1, internal, 75364, 75525 -recovered pasa_asmbl_33515.p1, internal, 75800, 75952 -recovered pasa_asmbl_33515.p1, internal, 76038, 76164 -recovered pasa_asmbl_33515.p1, internal, 76354, 76409 -recovered pasa_asmbl_33515.p1, internal, 76507, 76581 -recovered pasa_asmbl_33515.p1, internal, 76843, 76980 -recovered pasa_asmbl_33515.p1, internal, 77474, 77721 -recovered pasa_asmbl_33515.p1, internal, 77948, 78470 -recovered pasa_asmbl_33515.p1, internal, 78609, 78800 -recovered pasa_asmbl_33515.p1, internal, 79031, 79162 -recovered pasa_asmbl_33515.p1, internal, 81222, 81332 -recovered pasa_asmbl_33515.p1, internal, 81482, 82204 Couldn't classify 9200, 9529 Sorry, prediction pasa_asmbl_33504.p1 fails validation. (ATG) GT 9200-9529 GG GGG Valid prediction for snap_scaffold_25-snap.996-T1 Valid prediction for snap_scaffold_25-snap.998-T1 Valid prediction for snap_scaffold_25-snap.968-T1 Valid prediction for GlimmerHMM_glimmerT_55352-T1 Valid prediction for GlimmerHMM_glimmerT_55335-T1 Valid prediction for GeneMark_model.96614_t Valid prediction for GlimmerHMM_glimmerT_55320-T1 Couldn't classify 45302, 45613 Sorry, prediction pasa_asmbl_33513.p2 fails validation. (GCC) GT 45302-45613 GT AGG (GTG) AG 45786-45935 GT AGG (GTG) AG 46122-46262 GT AGG (AAG) AG 46806-46817 AC AAA -recovered pasa_asmbl_33513.p2, terminal, 46806, 46817 -recovered pasa_asmbl_33513.p2, internal, 45786, 45935 -recovered pasa_asmbl_33513.p2, internal, 46122, 46262 Valid prediction for GeneMark_model.96633_t Valid prediction for snap_scaffold_25-snap.969-T1 Valid prediction for GeneMark_model.96624_t Valid prediction for pasa_asmbl_33522.p1 Valid prediction for snap_scaffold_25-snap.960-T1 Valid prediction for snap_scaffold_25-snap.966-T1 Valid prediction for GlimmerHMM_glimmerT_55329-T1 Valid prediction for HiQ_model.g36912.t1 Valid prediction for GlimmerHMM_glimmerT_55340-T1 Valid prediction for snap_scaffold_25-snap.977-T1 Valid prediction for GlimmerHMM_glimmerT_55334-T1 Valid prediction for CodingQuarry_transcript_38619-T1 Valid prediction for GeneMark_model.96626_t Valid prediction for GeneMark_model.96623_t Valid prediction for Augustus_model.g36919.t1 Valid prediction for snap_scaffold_25-snap.953-T1 Valid prediction for snap_scaffold_25-snap.979-T1 Valid prediction for GlimmerHMM_glimmerT_55350-T1 Valid prediction for snap_scaffold_25-snap.954-T1 Valid prediction for snap_scaffold_25-snap.991-T1 Valid prediction for GlimmerHMM_glimmerT_55322-T1 Valid prediction for snap_scaffold_25-snap.990-T1 Valid prediction for Augustus_model.g36915.t1 Valid prediction for snap_scaffold_25-snap.974-T1 Valid prediction for Augustus_model.g36926.t1 Valid prediction for snap_scaffold_25-snap.988-T1 Valid prediction for Augustus_model.g36924.t1 Valid prediction for snap_scaffold_25-snap.993-T1 Valid prediction for GlimmerHMM_glimmerT_55325-T1 Valid prediction for GlimmerHMM_glimmerT_55344-T1 Valid prediction for GlimmerHMM_glimmerT_55338-T1 Valid prediction for GeneMark_model.96604_t Valid prediction for GeneMark_model.96610_t Valid prediction for GeneMark_model.96607_t Couldn't classify 9644, 9976 Couldn't classify 10284, 10454 Sorry, prediction pasa_asmbl_33505.p1 fails validation. (ACC) CC 9644-9976 GT AGG (GGT) AG 10284-10454 AG TGA Valid prediction for Augustus_model.g36910.t1 Valid prediction for snap_scaffold_25-snap.952-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.96632_t Valid prediction for GlimmerHMM_glimmerT_55321-T1 Valid prediction for GeneMark_model.96640_t Couldn't classify 58010, 58120 Couldn't classify 61039, 61145 Sorry, prediction pasa_asmbl_34530.p2 fails validation. (CAA) AG 58010-58120 GT AGG (CAC) AG 60364-60472 GT AGG (ATA) AG 61039-61145 GG TAG -recovered pasa_asmbl_34530.p2, internal, 58010, 58120 -recovered pasa_asmbl_34530.p2, internal, 60364, 60472 Couldn't classify 180197, 180578 Couldn't classify 180716, 180969 Sorry, prediction pasa_asmbl_34183.p1 fails validation. (CAG) AG 180197-180578 GT AGG (ATG) AG 180716-180969 CC GGC -recovered pasa_asmbl_34183.p1, internal, 180197, 180578 Valid prediction for GlimmerHMM_glimmerT_55359-T1 Valid prediction for snap_scaffold_25-snap.995-T1 Valid prediction for CodingQuarry_transcript_38620-T1 Valid prediction for snap_scaffold_25-snap.994-T1 Valid prediction for GeneMark_model.96611_t Valid prediction for Augustus_model.g36929.t1 Valid prediction for snap_scaffold_25-snap.997-T1 Valid prediction for GeneMark_model.96643_t Valid prediction for GlimmerHMM_glimmerT_55354-T1 Valid prediction for snap_scaffold_25-snap.956-T1 Valid prediction for snap_scaffold_25-snap.978-T1 Valid prediction for CodingQuarry_transcript_38626-T1 Valid prediction for GlimmerHMM_glimmerT_55356-T1 Valid prediction for GeneMark_model.96628_t Valid prediction for GeneMark_model.96629_t Couldn't classify 111954, 111980 Sorry, prediction pasa_asmbl_34196.p1 fails validation. (TTT) AC 111954-111980 GT TGG (GCG) AG 112119-112199 GT CGG (AAT) AG 112292-112343 GT GAG (TTA) AG 112503-112564 GT AGG (AAT) AG 112739-112843 GG AAG -recovered pasa_asmbl_34196.p1, terminal, 112739, 112843 -recovered pasa_asmbl_34196.p1, internal, 112119, 112199 -recovered pasa_asmbl_34196.p1, internal, 112292, 112343 -recovered pasa_asmbl_34196.p1, internal, 112503, 112564 Valid prediction for GeneMark_model.96631_t Valid prediction for GeneMark_model.96637_t Valid prediction for GeneMark_model.96621_t Valid prediction for GeneMark_model.96613_t Valid prediction for snap_scaffold_25-snap.971-T1 Valid prediction for GeneMark_model.96625_t Valid prediction for HiQ_model.g36909.t1 Valid prediction for GeneMark_model.96627_t Valid prediction for GlimmerHMM_glimmerT_55345-T1 Valid prediction for snap_scaffold_25-snap.992-T1 Valid prediction for snap_scaffold_25-snap.987-T1 Valid prediction for GlimmerHMM_glimmerT_55346-T1 Valid prediction for GeneMark_model.96635_t Valid prediction for GlimmerHMM_glimmerT_55326-T1 Valid prediction for HiQ_model.g36914.t1 Valid prediction for GlimmerHMM_glimmerT_55349-T1 Valid prediction for GeneMark_model.96603_t Couldn't classify 96492, 96525 Couldn't classify 100099, 100188 Sorry, prediction pasa_asmbl_34200.p1 fails validation. (AGT) AC 96492-96525 GT CTG (ACA) AG 96681-96789 GT GAG (CAA) AG 96964-96998 GT AAG (GCA) AG 97248-97357 GT AGG (AGC) AG 97804-97894 GT TTG (ACG) AG 98011-98087 GT ACG (GGT) AG 98243-98279 GT GGG (GTC) AG 98445-98542 GT GGG (AGT) AG 98820-98945 GT ACG (AGG) AG 99063-99220 GT AGG (TGC) AG 99522-99657 GT AGG (GCC) AG 99812-99961 GT AGG (AGA) AG 100099-100188 TG CAT add_exon() Sorry, pasa_asmbl_34200.p1 96681-96789-terminal-3 is invalid. -recovered pasa_asmbl_34200.p1, terminal, 96681, 96789 -recovered pasa_asmbl_34200.p1, internal, 96681, 96789 -recovered pasa_asmbl_34200.p1, internal, 96964, 96998 -recovered pasa_asmbl_34200.p1, internal, 97248, 97357 -recovered pasa_asmbl_34200.p1, internal, 97804, 97894 -recovered pasa_asmbl_34200.p1, internal, 98011, 98087 -recovered pasa_asmbl_34200.p1, internal, 98243, 98279 -recovered pasa_asmbl_34200.p1, internal, 98445, 98542 -recovered pasa_asmbl_34200.p1, internal, 98820, 98945 -recovered pasa_asmbl_34200.p1, internal, 99063, 99220 -recovered pasa_asmbl_34200.p1, internal, 99522, 99657 -recovered pasa_asmbl_34200.p1, internal, 99812, 99961 Valid prediction for HiQ_model.g36918.t1 Couldn't classify 179979, 180106 Sorry, prediction pasa_asmbl_34184.p2 fails validation. (ATG) CT 177459-177727 GT AGG (GTC) AG 178937-179031 GT AGG (CAG) AG 179979-180106 CA GCC -recovered pasa_asmbl_34184.p2, initial, 177459, 177727 -recovered pasa_asmbl_34184.p2, internal, 178937, 179031 Valid prediction for CodingQuarry_transcript_38621-T1 Couldn't classify 162539, 162645 Sorry, prediction pasa_asmbl_34188.p1 fails validation. (CGG) TC 162539-162645 GT ACG (GAC) AG 163450-163525 GT AGG (GGT) AG 164282-164448 GT CGG (TGA) AG 164829-164923 GT AGG (AGG) AG 165251-165414 GT AAG (GTG) AG 165748-165957 GT GGG (CTG) AG 166164-166450 GT AGG (GTG) AG 166577-166717 GT AGG (TGA) AG 166924-167012 GT AGG (AGA) AG 167115-167250 GT AGG (GTT) AG 167374-167605 GT GGG (GAG) AG 167756-167914 GT AGG (AGA) AG 168205-168293 GT AGG (GGA) AG 169526-169648 GT AGG (CAA) AG 169883-170048 GA GAG -recovered pasa_asmbl_34188.p1, terminal, 169883, 170048 -recovered pasa_asmbl_34188.p1, internal, 163450, 163525 -recovered pasa_asmbl_34188.p1, internal, 164282, 164448 -recovered pasa_asmbl_34188.p1, internal, 164829, 164923 -recovered pasa_asmbl_34188.p1, internal, 165251, 165414 -recovered pasa_asmbl_34188.p1, internal, 165748, 165957 -recovered pasa_asmbl_34188.p1, internal, 166164, 166450 -recovered pasa_asmbl_34188.p1, internal, 166577, 166717 -recovered pasa_asmbl_34188.p1, internal, 166924, 167012 -recovered pasa_asmbl_34188.p1, internal, 167115, 167250 -recovered pasa_asmbl_34188.p1, internal, 167374, 167605 -recovered pasa_asmbl_34188.p1, internal, 167756, 167914 -recovered pasa_asmbl_34188.p1, internal, 168205, 168293 -recovered pasa_asmbl_34188.p1, internal, 169526, 169648 Valid prediction for GeneMark_model.96605_t Valid prediction for GlimmerHMM_glimmerT_55330-T1 Valid prediction for GlimmerHMM_glimmerT_55360-T1 Valid prediction for GeneMark_model.96617_t Couldn't classify 198784, 199085 Sorry, prediction pasa_asmbl_34181.p1 fails validation. (ATG) CG 198307-198493 GT AGG (AAC) AG 198784-199085 GA AGG -recovered pasa_asmbl_34181.p1, initial, 198307, 198493 Valid prediction for snap_scaffold_25-snap.964-T1 Valid prediction for GlimmerHMM_glimmerT_55348-T1 Valid prediction for GlimmerHMM_glimmerT_55337-T1 Valid prediction for Augustus_model.g36922.t1 Valid prediction for snap_scaffold_25-snap.982-T1 Valid prediction for snap_scaffold_25-snap.958-T1 Valid prediction for GlimmerHMM_glimmerT_55341-T1 Valid prediction for snap_scaffold_25-snap.965-T1 Valid prediction for snap_scaffold_25-snap.989-T1 Valid prediction for GlimmerHMM_glimmerT_55323-T1 Valid prediction for GeneMark_model.96615_t Valid prediction for Augustus_model.g36920.t1 Valid prediction for HiQ_model.g36928.t1 Couldn't classify 101183, 101203 Sorry, prediction pasa_asmbl_34198.p1 fails validation. (ATC) AC 101183-101203 GT ACG (GGC) AG 101368-101502 GT AGG (GAG) AG 101627-101749 GT AGG (AGG) AG 101856-102022 GT AAG (TGA) AG 102331-102466 GT TGG (GAG) AG 103221-103547 GA GAG -recovered pasa_asmbl_34198.p1, terminal, 103221, 103547 -recovered pasa_asmbl_34198.p1, internal, 101368, 101502 -recovered pasa_asmbl_34198.p1, internal, 101627, 101749 -recovered pasa_asmbl_34198.p1, internal, 101856, 102022 -recovered pasa_asmbl_34198.p1, internal, 102331, 102466 Valid prediction for GeneMark_model.96608_t Valid prediction for GeneMark_model.96639_t Valid prediction for snap_scaffold_25-snap.976-T1 Valid prediction for GeneMark_model.96641_t Valid prediction for HiQ_model.g36911.t1 Valid prediction for GeneMark_model.96600_t Valid prediction for GeneMark_model.96602_t Valid prediction for snap_scaffold_25-snap.959-T1 Valid prediction for HiQ_model.g36927.t1 Valid prediction for GlimmerHMM_glimmerT_55358-T1 Valid prediction for snap_scaffold_25-snap.980-T1 Couldn't classify 199356, 199697 Sorry, prediction pasa_asmbl_34180.p1 fails validation. (GAG) CT 199356-199697 TC ACT Valid prediction for snap_scaffold_25-snap.967-T1 Valid prediction for snap_scaffold_25-snap.975-T1 Valid prediction for GeneMark_model.96619_t Valid prediction for GlimmerHMM_glimmerT_55336-T1 Valid prediction for GeneMark_model.96622_t Valid prediction for CodingQuarry_transcript_38622-T1 Valid prediction for GlimmerHMM_glimmerT_55342-T1 Valid prediction for GlimmerHMM_glimmerT_55332-T1 Valid prediction for GlimmerHMM_glimmerT_55357-T1 Valid prediction for pasa_asmbl_34192.p1 Valid prediction for GlimmerHMM_glimmerT_55324-T1 Valid prediction for snap_scaffold_25-snap.985-T1 Valid prediction for GlimmerHMM_glimmerT_55331-T1 Valid prediction for Augustus_model.g36917.t1 Valid prediction for GlimmerHMM_glimmerT_55339-T1 Valid prediction for GeneMark_model.96609_t Valid prediction for GlimmerHMM_glimmerT_55355-T1 Valid prediction for Augustus_model.g36923.t1 Valid prediction for CodingQuarry_transcript_38623-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 82204, rend_intergenic: 82201 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24294, rend_intergenic: 22678 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28443, rend_intergenic: 27170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38248, rend_intergenic: 33028 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71865, rend_intergenic: 69352 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100383, rend_intergenic: 98206 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119450, rend_intergenic: 117035 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122661, rend_intergenic: 121172 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127208, rend_intergenic: 124973 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139294, rend_intergenic: 128267 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143591, rend_intergenic: 139661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148095, rend_intergenic: 144131 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 150618, rend_intergenic: 149635 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152570, rend_intergenic: 151534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162893, rend_intergenic: 153260 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 201752 -exon list size: 754 building trellis 0.1 0.3 0.4 0.5 0.7 0.8 0.9 1.1 1.2 1.3 1.5 1.6 1.7 1.9 2.0 2.1 2.2 2.4 2.5 2.6 2.8 2.9 3.0 3.2 3.3 3.4 3.6 3.7 3.8 4.0 4.1 4.2 4.4 4.5 4.6 4.8 4.9 5.0 5.2 5.3 5.4 5.6 5.7 5.8 6.0 6.1 6.2 6.3 6.5 6.6 6.7 6.9 7.0 7.1 7.3 7.4 7.5 7.7 7.8 7.9 8.1 8.2 8.3 8.5 8.6 8.7 8.9 9.0 9.1 9.3 9.4 9.5 9.7 9.8 9.9 10.1 10.2 10.3 10.4 10.6 10.7 10.8 11.0 11.1 11.2 11.4 11.5 11.6 11.8 11.9 12.0 12.2 12.3 12.4 12.6 12.7 12.8 13.0 13.1 13.2 13.4 13.5 13.6 13.8 13.9 14.0 14.2 14.3 14.4 14.6 14.7 14.8 14.9 15.1 15.2 15.3 15.5 15.6 15.7 15.9 16.0 16.1 16.3 16.4 16.5 16.7 16.8 16.9 17.1 17.2 17.3 17.5 17.6 17.7 17.9 18.0 18.1 18.3 18.4 18.5 18.7 18.8 18.9 19.0 19.2 19.3 19.4 19.6 19.7 19.8 20.0 20.1 20.2 20.4 20.5 20.6 20.8 20.9 21.0 21.2 21.3 21.4 21.6 21.7 21.8 22.0 22.1 22.2 22.4 22.5 22.6 22.8 22.9 23.0 23.1 23.3 23.4 23.5 23.7 23.8 23.9 24.1 24.2 24.3 24.5 24.6 24.7 24.9 25.0 25.1 25.3 25.4 25.5 25.7 25.8 25.9 26.1 26.2 26.3 26.5 26.6 26.7 26.9 27.0 27.1 27.2 27.4 27.5 27.6 27.8 27.9 28.0 28.2 28.3 28.4 28.6 28.7 28.8 29.0 29.1 29.2 29.4 29.5 29.6 29.8 29.9 30.0 30.2 30.3 30.4 30.6 30.7 30.8 31.0 31.1 31.2 31.3 31.5 31.6 31.7 31.9 32.0 32.1 32.3 32.4 32.5 32.7 32.8 32.9 33.1 33.2 33.3 33.5 33.6 33.7 33.9 34.0 34.1 34.3 34.4 34.5 34.7 34.8 34.9 35.1 35.2 35.3 35.4 35.6 35.7 35.8 36.0 36.1 36.2 36.4 36.5 36.6 36.8 36.9 37.0 37.2 37.3 37.4 37.6 37.7 37.8 38.0 38.1 38.2 38.4 38.5 38.6 38.8 38.9 39.0 39.2 39.3 39.4 39.6 39.7 39.8 39.9 40.1 40.2 40.3 40.5 40.6 40.7 40.9 41.0 41.1 41.3 41.4 41.5 41.7 41.8 41.9 42.1 42.2 42.3 42.5 42.6 42.7 42.9 43.0 43.1 43.3 43.4 43.5 43.7 43.8 43.9 44.0 44.2 44.3 44.4 44.6 44.7 44.8 45.0 45.1 45.2 45.4 45.5 45.6 45.8 45.9 46.0 46.2 46.3 46.4 46.6 46.7 46.8 47.0 47.1 47.2 47.4 47.5 47.6 47.8 47.9 48.0 48.1 48.3 48.4 48.5 48.7 48.8 48.9 49.1 49.2 49.3 49.5 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.5 50.7 50.8 50.9 51.1 51.2 51.3 51.5 51.6 51.7 51.9 52.0 52.1 52.2 52.4 52.5 52.6 52.8 52.9 53.0 53.2 53.3 53.4 53.6 53.7 53.8 54.0 54.1 54.2 54.4 54.5 54.6 54.8 54.9 55.0 55.2 55.3 55.4 55.6 55.7 55.8 56.0 56.1 56.2 56.3 56.5 56.6 56.7 56.9 57.0 57.1 57.3 57.4 57.5 57.7 57.8 57.9 58.1 58.2 58.3 58.5 58.6 58.7 58.9 59.0 59.1 59.3 59.4 59.5 59.7 59.8 59.9 60.1 60.2 60.3 60.4 60.6 60.7 60.8 61.0 61.1 61.2 61.4 61.5 61.6 61.8 61.9 62.0 62.2 62.3 62.4 62.6 62.7 62.8 63.0 63.1 63.2 63.4 63.5 63.6 63.8 63.9 64.0 64.2 64.3 64.4 64.6 64.7 64.8 64.9 65.1 65.2 65.3 65.5 65.6 65.7 65.9 66.0 66.1 66.3 66.4 66.5 66.7 66.8 66.9 67.1 67.2 67.3 67.5 67.6 67.7 67.9 68.0 68.1 68.3 68.4 68.5 68.7 68.8 68.9 69.0 69.2 69.3 69.4 69.6 69.7 69.8 70.0 70.1 70.2 70.4 70.5 70.6 70.8 70.9 71.0 71.2 71.3 71.4 71.6 71.7 71.8 72.0 72.1 72.2 72.4 72.5 72.6 72.8 72.9 73.0 73.1 73.3 73.4 73.5 73.7 73.8 73.9 74.1 74.2 74.3 74.5 74.6 74.7 74.9 75.0 75.1 75.3 75.4 75.5 75.7 75.8 75.9 76.1 76.2 76.3 76.5 76.6 76.7 76.9 77.0 77.1 77.2 77.4 77.5 77.6 77.8 77.9 78.0 78.2 78.3 78.4 78.6 78.7 78.8 79.0 79.1 79.2 79.4 79.5 79.6 79.8 79.9 80.0 80.2 80.3 80.4 80.6 80.7 80.8 81.0 81.1 81.2 81.3 81.5 81.6 81.7 81.9 82.0 82.1 82.3 82.4 82.5 82.7 82.8 82.9 83.1 83.2 83.3 83.5 83.6 83.7 83.9 84.0 84.1 84.3 84.4 84.5 84.7 84.8 84.9 85.1 85.2 85.3 85.4 85.6 85.7 85.8 86.0 86.1 86.2 86.4 86.5 86.6 86.8 86.9 87.0 87.2 87.3 87.4 87.6 87.7 87.8 88.0 88.1 88.2 88.4 88.5 88.6 88.8 88.9 89.0 89.2 89.3 89.4 89.6 89.7 89.8 89.9 90.1 90.2 90.3 90.5 90.6 90.7 90.9 91.0 91.1 91.3 91.4 91.5 91.7 91.8 91.9 92.1 92.2 92.3 92.5 92.6 92.7 92.9 93.0 93.1 93.3 93.4 93.5 93.7 93.8 93.9 94.0 94.2 94.3 94.4 94.6 94.7 94.8 95.0 95.1 95.2 95.4 95.5 95.6 95.8 95.9 96.0 96.2 96.3 96.4 96.6 96.7 96.8 97.0 97.1 97.2 97.4 97.5 97.6 97.8 97.9 98.0 98.1 98.3 98.4 98.5 98.7 98.8 98.9 99.1 99.2 99.3 99.5 99.6 99.7 99.9 -found 38 predictions from path traversal Error with prediction: GlimmerHMM lend_intergenic: 82204, rend_intergenic: 82201 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24294, rend_intergenic: 22678 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28443, rend_intergenic: 27170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38248, rend_intergenic: 33028 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71865, rend_intergenic: 69352 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100383, rend_intergenic: 98206 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119450, rend_intergenic: 117035 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122661, rend_intergenic: 121172 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127208, rend_intergenic: 124973 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139294, rend_intergenic: 128267 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143591, rend_intergenic: 139661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148095, rend_intergenic: 144131 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 150618, rend_intergenic: 149635 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152570, rend_intergenic: 151534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162893, rend_intergenic: 153260 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 29 predictions persist after filtering for low support