-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_25/scaffold_25_4309558-4503988

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for pasa_asmbl_33499.p1
Valid prediction for GeneMark_model.96571_t
Valid prediction for GeneMark_model.96563_t
Valid prediction for GlimmerHMM_glimmerT_55297-T1
Valid prediction for snap_scaffold_25-snap.932-T1
Valid prediction for GeneMark_model.96585_t
Valid prediction for snap_scaffold_25-snap.923-T1
Valid prediction for GeneMark_model.96557_t
Valid prediction for snap_scaffold_25-snap.942-T1
Valid prediction for pasa_asmbl_33492.p2
Valid prediction for GeneMark_model.96597_t
Valid prediction for GeneMark_model.96588_t
Valid prediction for GlimmerHMM_glimmerT_55313-T1
Valid prediction for snap_scaffold_25-snap.935-T1
Valid prediction for snap_scaffold_25-snap.930-T1
Valid prediction for CodingQuarry_transcript_38613-T1
Valid prediction for GlimmerHMM_glimmerT_55292-T1
Valid prediction for GeneMark_model.96586_t
Valid prediction for GlimmerHMM_glimmerT_55306-T1
Valid prediction for CodingQuarry_transcript_38616-T1
Valid prediction for GeneMark_model.96584_t
Valid prediction for CodingQuarry_transcript_38615-T1
Valid prediction for GeneMark_model.96595_t
Valid prediction for Augustus_model.g36890.t1
Valid prediction for GeneMark_model.96579_t
Valid prediction for snap_scaffold_25-snap.950-T1
Valid prediction for snap_scaffold_25-snap.914-T1
Valid prediction for GlimmerHMM_glimmerT_55291-T1
Valid prediction for Augustus_model.g36898.t1
Valid prediction for HiQ_model.g36885.t1
Valid prediction for Augustus_model.g36900.t1
Valid prediction for GeneMark_model.96569_t
Valid prediction for snap_scaffold_25-snap.920-T1
Valid prediction for GlimmerHMM_glimmerT_55296-T1
Valid prediction for CodingQuarry_transcript_38612-T1
Valid prediction for snap_scaffold_25-snap.918-T1
Valid prediction for GeneMark_model.96593_t
Valid prediction for Augustus_model.g36895.t1
Valid prediction for snap_scaffold_25-snap.924-T1
Valid prediction for GeneMark_model.96581_t
Valid prediction for HiQ_model.g36896.t1
Valid prediction for Augustus_model.g36901.t1
Valid prediction for snap_scaffold_25-snap.937-T1
Valid prediction for GeneMark_model.96554_t
Valid prediction for GlimmerHMM_glimmerT_55311-T1
Valid prediction for GeneMark_model.96573_t
Valid prediction for CodingQuarry_transcript_38611-T1
Valid prediction for GeneMark_model.96550_t
Valid prediction for pasa_asmbl_33484.p1
Valid prediction for GeneMark_model.96548_t
Valid prediction for GlimmerHMM_glimmerT_55307-T1
Valid prediction for snap_scaffold_25-snap.949-T1
Couldn't classify 147749, 147943
Sorry, prediction pasa_asmbl_33502.p1 fails validation.
(TGT)	 AG	147749-147943	GT	AGG
(AAC)	 AG	148180-148344	GT	GGG
(GGT)	 AG	148449-148489	GT	AGG
(AAC)	 AG	148659-148926	CC	GAC
-recovered pasa_asmbl_33502.p1, terminal, 148659, 148926
-recovered pasa_asmbl_33502.p1, internal, 147749, 147943
-recovered pasa_asmbl_33502.p1, internal, 148180, 148344
-recovered pasa_asmbl_33502.p1, internal, 148449, 148489
Valid prediction for snap_scaffold_25-snap.934-T1
Valid prediction for Augustus_model.g36902.t1
Valid prediction for snap_scaffold_25-snap.940-T1
Valid prediction for CodingQuarry_transcript_38614-T1
Valid prediction for GeneMark_model.96575_t
Valid prediction for GlimmerHMM_glimmerT_55312-T1
Valid prediction for GeneMark_model.96560_t
Valid prediction for GlimmerHMM_glimmerT_55309-T1
Valid prediction for GeneMark_model.96590_t
Valid prediction for Augustus_model.g36897.t1
Valid prediction for GeneMark_model.96552_t
Valid prediction for GeneMark_model.96565_t
Valid prediction for GlimmerHMM_glimmerT_55298-T1
Valid prediction for GeneMark_model.96567_t
Valid prediction for snap_scaffold_25-snap.936-T1
Valid prediction for GlimmerHMM_glimmerT_55308-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_55299-T1
Couldn't classify 168136, 168279
Couldn't classify 171044, 171157
Sorry, prediction pasa_asmbl_34164.p1 fails validation.
(GTG)	 GC	168136-168279	GT	TGG
(CTT)	 AG	169646-169720	GT	ATG
(TTG)	 AG	171044-171157	GC	ACG
-recovered pasa_asmbl_34164.p1, internal, 169646, 169720
-recovered pasa_asmbl_34164.p1, internal, 171044, 171157
Valid prediction for GlimmerHMM_glimmerT_55317-T1
Valid prediction for GeneMark_model.96589_t
Valid prediction for snap_scaffold_25-snap.926-T1
Valid prediction for GeneMark_model.96555_t
Valid prediction for GlimmerHMM_glimmerT_55314-T1
Valid prediction for GlimmerHMM_glimmerT_55305-T1
Valid prediction for snap_scaffold_25-snap.943-T1
Valid prediction for Augustus_model.g36886.t1
Couldn't classify 113811, 113889
Couldn't classify 115316, 115354
Sorry, prediction pasa_asmbl_34169.p2 fails validation.
(ATC)	 AG	113811-113889	GT	CTG
(TGC)	 AG	114562-114758	GT	AGG
(GCT)	 AG	114923-115003	GT	AGG
(AGA)	 AG	115109-115195	GT	AGG
(GAA)	 AG	115316-115354	GA	TCG
-recovered pasa_asmbl_34169.p2, internal, 113811, 113889
-recovered pasa_asmbl_34169.p2, internal, 114562, 114758
-recovered pasa_asmbl_34169.p2, internal, 114923, 115003
-recovered pasa_asmbl_34169.p2, internal, 115109, 115195
Couldn't classify 171513, 171532
Couldn't classify 175737, 175832
Sorry, prediction pasa_asmbl_34163.p1 fails validation.
(CCT)	 AA	171513-171532	GT	AGG
(GTT)	 AG	171896-172017	GT	CGG
(ATG)	 AG	172235-172353	GT	AGG
(GCC)	 AG	174561-174673	GT	AGG
(TGA)	 AG	174844-174995	GT	CAG
(GCA)	 AG	175089-175186	GT	AGG
(GCG)	 AG	175469-175618	GT	AAG
(GAG)	 AG	175737-175832	CA	ACC
add_exon() Sorry, pasa_asmbl_34163.p1 172235-172353-initial-1 is invalid.
-recovered pasa_asmbl_34163.p1, initial, 172235, 172353
-recovered pasa_asmbl_34163.p1, internal, 171896, 172017
-recovered pasa_asmbl_34163.p1, internal, 172235, 172353
-recovered pasa_asmbl_34163.p1, internal, 174561, 174673
-recovered pasa_asmbl_34163.p1, internal, 174844, 174995
-recovered pasa_asmbl_34163.p1, internal, 175089, 175186
-recovered pasa_asmbl_34163.p1, internal, 175469, 175618
Valid prediction for snap_scaffold_25-snap.931-T1
Sorry, intron length (9) is less than minimum required (10)
Couldn't classify 115641, 115670
Couldn't classify 119086, 119099
Sorry, prediction pasa_asmbl_34168.p1 fails validation.
(GGT)	 CT	115641-115670	GT	AGG
(GTC)	 AG	115775-115860	GT	CAG
(GGA)	 AG	116028-116109	GT	AGG
(AAA)	 AG	116230-116336	GT	CGG
(GGC)	 AG	116550-116648	GT	AGG
(ATA)	 AG	116785-116929	GT	CGG
(CTG)	 AG	117387-117501	GT	AGG
(CCT)	 AG	117663-117832	GT	AGG
(TCA)	 AG	118073-118218	GT	AGG
(CAC)	 AG	118410-118556	GT	AGG
(GCT)	 AG	118768-118916	GT	CAG
(AAC)	 AG	119086-119099	AG	AGA
-recovered pasa_asmbl_34168.p1, internal, 115775, 115860
-recovered pasa_asmbl_34168.p1, internal, 116028, 116109
-recovered pasa_asmbl_34168.p1, internal, 116230, 116336
-recovered pasa_asmbl_34168.p1, internal, 116550, 116648
-recovered pasa_asmbl_34168.p1, internal, 116785, 116929
-recovered pasa_asmbl_34168.p1, internal, 117387, 117501
-recovered pasa_asmbl_34168.p1, internal, 117663, 117832
-recovered pasa_asmbl_34168.p1, internal, 118073, 118218
-recovered pasa_asmbl_34168.p1, internal, 118410, 118556
-recovered pasa_asmbl_34168.p1, internal, 118768, 118916
Valid prediction for GeneMark_model.96562_t
Valid prediction for snap_scaffold_25-snap.928-T1
Valid prediction for Augustus_model.g36899.t1
Valid prediction for Augustus_model.g36889.t1
Valid prediction for GeneMark_model.96592_t
Valid prediction for snap_scaffold_25-snap.941-T1
Valid prediction for GeneMark_model.96549_t
Valid prediction for GlimmerHMM_glimmerT_55310-T1
Valid prediction for GeneMark_model.96558_t
Valid prediction for snap_scaffold_25-snap.925-T1
Valid prediction for snap_scaffold_25-snap.921-T1
Valid prediction for GeneMark_model.96577_t
Valid prediction for GlimmerHMM_glimmerT_55303-T1
Valid prediction for HiQ_model.g36887.t1
Valid prediction for GeneMark_model.96546_t
Valid prediction for Augustus_model.g36904.t1
Valid prediction for GeneMark_model.96559_t
Valid prediction for GeneMark_model.96591_t
Valid prediction for GeneMark_model.96596_t
Valid prediction for snap_scaffold_25-snap.946-T1
Valid prediction for Augustus_model.g36893.t1
Valid prediction for GeneMark_model.96580_t
Valid prediction for snap_scaffold_25-snap.915-T1
Valid prediction for snap_scaffold_25-snap.948-T1
Valid prediction for GeneMark_model.96594_t
Valid prediction for GlimmerHMM_glimmerT_55301-T1
Couldn't classify 31916, 32065
Sorry, prediction pasa_asmbl_34174.p1 fails validation.
(GAG)	 CA	31916-32065	GT	TGG
(ATC)	 AG	32269-32503	GT	AGG
(AGC)	 AG	33528-33613	GT	AGG
(GCG)	 AG	34069-34153	GT	TGG
(AAG)	 AG	34439-34587	GT	TGG
(CCC)	 AG	34772-34855	GT	AGG
(GTG)	 AG	36765-36871	GT	AAG
(GTG)	 AG	37886-37940	AC	AAA
-recovered pasa_asmbl_34174.p1, terminal, 37886, 37940
-recovered pasa_asmbl_34174.p1, internal, 32269, 32503
-recovered pasa_asmbl_34174.p1, internal, 33528, 33613
-recovered pasa_asmbl_34174.p1, internal, 34069, 34153
-recovered pasa_asmbl_34174.p1, internal, 34439, 34587
-recovered pasa_asmbl_34174.p1, internal, 34772, 34855
-recovered pasa_asmbl_34174.p1, internal, 36765, 36871
Valid prediction for GeneMark_model.96587_t
Valid prediction for HiQ_model.g36884.t1
Valid prediction for snap_scaffold_25-snap.939-T1
Valid prediction for GeneMark_model.96561_t
Valid prediction for GeneMark_model.96547_t
Valid prediction for GlimmerHMM_glimmerT_55318-T1
Valid prediction for Augustus_model.g36888.t1
Valid prediction for GlimmerHMM_glimmerT_55295-T1
Couldn't classify 2794, 4137
Sorry, prediction pasa_asmbl_34179.p1 fails validation.
(GAC)	 CT	2794-4137	GT	AGG
(CCC)	 AG	4289-4390	GT	ACG
(ACG)	 AG	4510-4744	GT	TAG
(GTG)	 AG	4887-5044	GT	AGG
(AGT)	 AG	5122-5259	GT	TGG
(GCT)	 AG	5508-5631	GT	CAG
(AAA)	 AG	5707-5838	GT	TGG
(GCG)	 AG	6231-6368	GT	CCG
(CCT)	 AG	6552-6665	GT	AGG
(TGT)	 AG	6778-6851	GT	AGG
(CAA)	 AG	7045-7155	GT	TGG
(TGT)	 AG	7310-7425	GT	CGG
(GTT)	 AG	7766-7904	GT	AGG
(CTC)	 AG	8210-8330	GT	CGG
(TGG)	 AG	8555-8643	CC	GAC
-recovered pasa_asmbl_34179.p1, terminal, 8555, 8643
-recovered pasa_asmbl_34179.p1, internal, 4289, 4390
-recovered pasa_asmbl_34179.p1, internal, 4510, 4744
-recovered pasa_asmbl_34179.p1, internal, 4887, 5044
-recovered pasa_asmbl_34179.p1, internal, 5122, 5259
-recovered pasa_asmbl_34179.p1, internal, 5508, 5631
-recovered pasa_asmbl_34179.p1, internal, 5707, 5838
-recovered pasa_asmbl_34179.p1, internal, 6231, 6368
-recovered pasa_asmbl_34179.p1, internal, 6552, 6665
-recovered pasa_asmbl_34179.p1, internal, 6778, 6851
-recovered pasa_asmbl_34179.p1, internal, 7045, 7155
-recovered pasa_asmbl_34179.p1, internal, 7310, 7425
-recovered pasa_asmbl_34179.p1, internal, 7766, 7904
-recovered pasa_asmbl_34179.p1, internal, 8210, 8330
Valid prediction for GlimmerHMM_glimmerT_55290-T1
Valid prediction for GeneMark_model.96553_t
Valid prediction for GeneMark_model.96551_t
Valid prediction for snap_scaffold_25-snap.922-T1
Valid prediction for GlimmerHMM_glimmerT_55304-T1
Valid prediction for GeneMark_model.96570_t
Valid prediction for GeneMark_model.96576_t
Valid prediction for GeneMark_model.96564_t
Couldn't classify 1823, 2124
Sorry, prediction pasa_asmbl_34181.p1 fails validation.
(ATG)	 CG	1346-1532	GT	AGG
(AAC)	 AG	1823-2124	GA	AGG
-recovered pasa_asmbl_34181.p1, initial, 1346, 1532
Valid prediction for Augustus_model.g36903.t1
Valid prediction for GeneMark_model.96578_t
Couldn't classify 2395, 2736
Sorry, prediction pasa_asmbl_34180.p1 fails validation.
(GAG)	 CT	2395-2736	TC	ACT
Valid prediction for HiQ_model.g36905.t1
Valid prediction for snap_scaffold_25-snap.919-T1
Valid prediction for GeneMark_model.96574_t
Valid prediction for GlimmerHMM_glimmerT_55319-T1
Valid prediction for GlimmerHMM_glimmerT_55315-T1
Valid prediction for snap_scaffold_25-snap.916-T1
Valid prediction for Augustus_model.g36892.t1
Valid prediction for snap_scaffold_25-snap.927-T1
Valid prediction for Augustus_model.g36891.t1
Valid prediction for snap_scaffold_25-snap.944-T1
Valid prediction for GlimmerHMM_glimmerT_55293-T1
Valid prediction for GlimmerHMM_glimmerT_55300-T1
Valid prediction for GlimmerHMM_glimmerT_55302-T1
Valid prediction for GlimmerHMM_glimmerT_55294-T1
Valid prediction for snap_scaffold_25-snap.929-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_25-snap.938-T1
Valid prediction for snap_scaffold_25-snap.913-T1
Valid prediction for GlimmerHMM_glimmerT_55316-T1
Valid prediction for GeneMark_model.96556_t
Valid prediction for snap_scaffold_25-snap.933-T1
Valid prediction for snap_scaffold_25-snap.947-T1
Valid prediction for snap_scaffold_25-snap.951-T1
Valid prediction for GeneMark_model.96566_t
Valid prediction for GeneMark_model.96572_t
Valid prediction for snap_scaffold_25-snap.945-T1
Valid prediction for snap_scaffold_25-snap.917-T1
Valid prediction for Augustus_model.g36894.t1
Valid prediction for GeneMark_model.96583_t
Valid prediction for GeneMark_model.96568_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 26449, rend_intergenic: 20609  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29821, rend_intergenic: 26873  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46178, rend_intergenic: 42458  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63352, rend_intergenic: 55690  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101166, rend_intergenic: 91843  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107316, rend_intergenic: 101249  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108165, rend_intergenic: 107529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109370, rend_intergenic: 108269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117576, rend_intergenic: 112731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149422, rend_intergenic: 141649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162290, rend_intergenic: 159393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165257, rend_intergenic: 163970  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184122, rend_intergenic: 183589  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189035, rend_intergenic: 185789  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 194431
-exon list size: 871


building trellis

0.1    
0.2    
0.3    
0.5    
0.6    
0.7    
0.8    
0.9    
1.0    
1.1    
1.3    
1.4    
1.5    
1.6    
1.7    
1.8    
1.9    
2.1    
2.2    
2.3    
2.4    
2.5    
2.6    
2.7    
2.9    
3.0    
3.1    
3.2    
3.3    
3.4    
3.6    
3.7    
3.8    
3.9    
4.0    
4.1    
4.2    
4.4    
4.5    
4.6    
4.7    
4.8    
4.9    
5.0    
5.2    
5.3    
5.4    
5.5    
5.6    
5.7    
5.8    
6.0    
6.1    
6.2    
6.3    
6.4    
6.5    
6.6    
6.8    
6.9    
7.0    
7.1    
7.2    
7.3    
7.4    
7.6    
7.7    
7.8    
7.9    
8.0    
8.1    
8.2    
8.4    
8.5    
8.6    
8.7    
8.8    
8.9    
9.0    
9.2    
9.3    
9.4    
9.5    
9.6    
9.7    
9.9    
10.0    
10.1    
10.2    
10.3    
10.4    
10.5    
10.7    
10.8    
10.9    
11.0    
11.1    
11.2    
11.3    
11.5    
11.6    
11.7    
11.8    
11.9    
12.0    
12.1    
12.3    
12.4    
12.5    
12.6    
12.7    
12.8    
12.9    
13.1    
13.2    
13.3    
13.4    
13.5    
13.6    
13.7    
13.9    
14.0    
14.1    
14.2    
14.3    
14.4    
14.5    
14.7    
14.8    
14.9    
15.0    
15.1    
15.2    
15.3    
15.5    
15.6    
15.7    
15.8    
15.9    
16.0    
16.2    
16.3    
16.4    
16.5    
16.6    
16.7    
16.8    
17.0    
17.1    
17.2    
17.3    
17.4    
17.5    
17.6    
17.8    
17.9    
18.0    
18.1    
18.2    
18.3    
18.4    
18.6    
18.7    
18.8    
18.9    
19.0    
19.1    
19.2    
19.4    
19.5    
19.6    
19.7    
19.8    
19.9    
20.0    
20.2    
20.3    
20.4    
20.5    
20.6    
20.7    
20.8    
21.0    
21.1    
21.2    
21.3    
21.4    
21.5    
21.6    
21.8    
21.9    
22.0    
22.1    
22.2    
22.3    
22.5    
22.6    
22.7    
22.8    
22.9    
23.0    
23.1    
23.3    
23.4    
23.5    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.5    
24.6    
24.7    
24.9    
25.0    
25.1    
25.2    
25.3    
25.4    
25.5    
25.7    
25.8    
25.9    
26.0    
26.1    
26.2    
26.3    
26.5    
26.6    
26.7    
26.8    
26.9    
27.0    
27.1    
27.3    
27.4    
27.5    
27.6    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.4    
28.5    
28.6    
28.8    
28.9    
29.0    
29.1    
29.2    
29.3    
29.4    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
30.2    
30.4    
30.5    
30.6    
30.7    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.8    
32.9    
33.0    
33.1    
33.2    
33.3    
33.4    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.7    
99.8    
99.9    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 26449, rend_intergenic: 20609  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29821, rend_intergenic: 26873  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46178, rend_intergenic: 42458  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63352, rend_intergenic: 55690  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101166, rend_intergenic: 91843  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107316, rend_intergenic: 101249  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108165, rend_intergenic: 107529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109370, rend_intergenic: 108269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117576, rend_intergenic: 112731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149422, rend_intergenic: 141649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162290, rend_intergenic: 159393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165257, rend_intergenic: 163970  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184122, rend_intergenic: 183589  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189035, rend_intergenic: 185789  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 24 predictions persist after filtering for low support