-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2497

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 717, 791
Couldn't classify 1187, 1225
Sorry, prediction GeneMark_model.110377_t fails validation.
(GAG)	 AG	717-791	GT	ACG
(GAG)	 AG	825-875	GT	ACG
(AGG)	 AG	909-941	GT	ACG
(GAG)	 AG	977-985	GT	ACG
(GAG)	 AG	1021-1113	GT	ACG
(AGA)	 AG	1143-1157	GT	ACG
(AGA)	 AG	1187-1225	GT	ACG
-recovered GeneMark_model.110377_t, internal, 717, 791
-recovered GeneMark_model.110377_t, internal, 825, 875
-recovered GeneMark_model.110377_t, internal, 909, 941
-recovered GeneMark_model.110377_t, internal, 977, 985
-recovered GeneMark_model.110377_t, internal, 1021, 1113
-recovered GeneMark_model.110377_t, internal, 1143, 1157
-recovered GeneMark_model.110377_t, internal, 1187, 1225

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1245
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support