-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2476

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g42091.t1
Couldn't classify 896, 1087
Sorry, prediction GeneMark_model.110361_t fails validation.
(GAC)	 AG	896-1087	GT	AGG
-recovered GeneMark_model.110361_t, internal, 896, 1087
Valid prediction for GlimmerHMM_glimmerT_63129-T1
Couldn't classify 889, 1087
Sorry, prediction snap_scaffold_2476-snap.1-T1 fails validation.
(CTG)	 AG	889-1087	GT	AGG
-recovered snap_scaffold_2476-snap.1-T1, internal, 889, 1087

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1263
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support