-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2469

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 515, 520
Sorry, prediction GeneMark_model.110354_t fails validation.
(GGA)	 AG	515-520	GT	GGG
(GGG)	 AG	543-551	GC	GGG
(GAG)	 AG	575-616	GT	AGG
(GGA)	 AG	639-656	GT	GAG
(GGG)	 AG	679-733	CA	GAC
-recovered GeneMark_model.110354_t, terminal, 679, 733
-recovered GeneMark_model.110354_t, internal, 515, 520
-recovered GeneMark_model.110354_t, internal, 543, 551
-recovered GeneMark_model.110354_t, internal, 575, 616
-recovered GeneMark_model.110354_t, internal, 639, 656
Valid prediction for snap_scaffold_2469-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1266
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support