-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2468

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 484, 558
Couldn't classify 923, 1059
Sorry, prediction GeneMark_model.110353_t fails validation.
(AGA)	 AG	484-558	GT	GAG
(GGA)	 AG	583-739	GT	TGG
(CCT)	 AG	923-1059	GT	AGG
-recovered GeneMark_model.110353_t, internal, 484, 558
-recovered GeneMark_model.110353_t, internal, 583, 739
-recovered GeneMark_model.110353_t, internal, 923, 1059
Couldn't classify 948, 1059
Sorry, prediction snap_scaffold_2468-snap.1-T1 fails validation.
(ATG)	 GG	470-667	GT	TGG
(ATC)	 AG	948-1059	GT	AGG
-recovered snap_scaffold_2468-snap.1-T1, initial, 470, 667
-recovered snap_scaffold_2468-snap.1-T1, internal, 948, 1059

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1267
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support