-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_878943-1063464

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.92533_t
Valid prediction for Augustus_model.g35669.t1
Valid prediction for GlimmerHMM_glimmerT_53217-T1
Couldn't classify 45290, 45406
Sorry, prediction pasa_asmbl_32065.p2 fails validation.
(CTG)	 GT	45290-45406	GT	ACG
(GTC)	 AG	46718-46912	CC	GAC
-recovered pasa_asmbl_32065.p2, terminal, 46718, 46912
Valid prediction for GeneMark_model.92508_t
Valid prediction for GlimmerHMM_glimmerT_53219-T1
Valid prediction for GlimmerHMM_glimmerT_53213-T1
Valid prediction for snap_scaffold_24-snap.251-T1
Valid prediction for snap_scaffold_24-snap.226-T1
Valid prediction for snap_scaffold_24-snap.221-T1
Valid prediction for snap_scaffold_24-snap.257-T1
Valid prediction for snap_scaffold_24-snap.238-T1
Valid prediction for Augustus_model.g35660.t1
Valid prediction for GlimmerHMM_glimmerT_53216-T1
Valid prediction for Augustus_model.g35655.t1
Valid prediction for snap_scaffold_24-snap.248-T1
Valid prediction for GlimmerHMM_glimmerT_53210-T1
Valid prediction for snap_scaffold_24-snap.211-T1
Valid prediction for GeneMark_model.92530_t
Valid prediction for Augustus_model.g35667.t1
Valid prediction for GlimmerHMM_glimmerT_53227-T1
Couldn't classify 153555, 153681
Sorry, prediction pasa_asmbl_32068.p1 fails validation.
(AAG)	 TC	153555-153681	GT	AGG
(GTC)	 AG	156236-156391	GT	GGG
(ATG)	 AG	156653-156837	GT	GGG
(CCT)	 AG	156979-157062	GT	AGG
(AGG)	 AG	157238-157495	CC	GAC
add_exon() Sorry, pasa_asmbl_32068.p1 156653-156837-initial-1 is invalid.
-recovered pasa_asmbl_32068.p1, initial, 156653, 156837
-recovered pasa_asmbl_32068.p1, terminal, 157238, 157495
-recovered pasa_asmbl_32068.p1, internal, 156236, 156391
-recovered pasa_asmbl_32068.p1, internal, 156653, 156837
-recovered pasa_asmbl_32068.p1, internal, 156979, 157062
Valid prediction for GeneMark_model.92542_t
Valid prediction for snap_scaffold_24-snap.254-T1
Valid prediction for GeneMark_model.92559_t
Valid prediction for GeneMark_model.92509_t
Valid prediction for GeneMark_model.92515_t
Valid prediction for GeneMark_model.92556_t
Valid prediction for snap_scaffold_24-snap.243-T1
Valid prediction for GeneMark_model.92520_t
Valid prediction for GeneMark_model.92536_t
Valid prediction for GeneMark_model.92540_t
Valid prediction for GeneMark_model.92511_t
Valid prediction for GlimmerHMM_glimmerT_53233-T1
Valid prediction for GeneMark_model.92544_t
Valid prediction for Augustus_model.g35662.t1
Valid prediction for GeneMark_model.92523_t
Valid prediction for snap_scaffold_24-snap.240-T1
Valid prediction for GlimmerHMM_glimmerT_53223-T1
Valid prediction for Augustus_model.g35663.t1
Valid prediction for GeneMark_model.92554_t
Valid prediction for snap_scaffold_24-snap.210-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_53238-T1
Valid prediction for GlimmerHMM_glimmerT_53207-T1
Couldn't classify 30632, 30691
Sorry, prediction pasa_asmbl_32064.p1 fails validation.
(AAA)	 TC	30632-30691	GT	AGG
(GCT)	 AG	31067-31327	GT	GGG
(CCT)	 AG	32252-32347	GC	AAG
-recovered pasa_asmbl_32064.p1, terminal, 32252, 32347
-recovered pasa_asmbl_32064.p1, internal, 31067, 31327
-recovered pasa_asmbl_32064.p1, internal, 32252, 32347
Valid prediction for GeneMark_model.92562_t
Valid prediction for GlimmerHMM_glimmerT_53229-T1
Valid prediction for snap_scaffold_24-snap.227-T1
Valid prediction for GeneMark_model.92550_t
Valid prediction for GlimmerHMM_glimmerT_53221-T1
Valid prediction for GeneMark_model.92513_t
Valid prediction for Augustus_model.g35654.t1
Valid prediction for GeneMark_model.92557_t
Valid prediction for GeneMark_model.92506_t
Valid prediction for GlimmerHMM_glimmerT_53214-T1
Valid prediction for GlimmerHMM_glimmerT_53222-T1
Valid prediction for GeneMark_model.92564_t
Valid prediction for GeneMark_model.92546_t
Valid prediction for snap_scaffold_24-snap.213-T1
Valid prediction for GlimmerHMM_glimmerT_53237-T1
Valid prediction for GeneMark_model.92561_t
Valid prediction for CodingQuarry_transcript_37156-T1
Valid prediction for snap_scaffold_24-snap.232-T1
Valid prediction for GeneMark_model.92548_t
Valid prediction for Augustus_model.g35665.t1
Valid prediction for GeneMark_model.92553_t
Valid prediction for GlimmerHMM_glimmerT_53235-T1
Valid prediction for snap_scaffold_24-snap.220-T1
Valid prediction for GeneMark_model.92517_t
Valid prediction for snap_scaffold_24-snap.258-T1
Valid prediction for GlimmerHMM_glimmerT_53225-T1
Valid prediction for Augustus_model.g35658.t1
Valid prediction for snap_scaffold_24-snap.239-T1
Valid prediction for snap_scaffold_24-snap.249-T1
Valid prediction for GeneMark_model.92537_t
Valid prediction for GlimmerHMM_glimmerT_53226-T1
Valid prediction for GeneMark_model.92525_t
Valid prediction for Augustus_model.g35659.t1
Valid prediction for snap_scaffold_24-snap.223-T1
Valid prediction for GeneMark_model.92516_t
Valid prediction for snap_scaffold_24-snap.230-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_24-snap.216-T1
Valid prediction for GeneMark_model.92501_t
Valid prediction for GeneMark_model.92527_t
Couldn't classify 139029, 139379
Sorry, prediction pasa_asmbl_32704.p1 fails validation.
(CCA)	 TA	139029-139379	CA	GAC
Valid prediction for snap_scaffold_24-snap.253-T1
Valid prediction for snap_scaffold_24-snap.246-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_24-snap.224-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for CodingQuarry_transcript_37158-T1
Valid prediction for GeneMark_model.92563_t
Valid prediction for GeneMark_model.92504_t
Valid prediction for GeneMark_model.92549_t
Couldn't classify 49200, 49324
Sorry, prediction pasa_asmbl_33234.p1 fails validation.
(TCT)	 GG	49200-49324	GT	TGG
(GAA)	 AG	49485-49592	GT	AGG
(AGA)	 AG	49731-49797	AC	GAA
-recovered pasa_asmbl_33234.p1, terminal, 49731, 49797
-recovered pasa_asmbl_33234.p1, internal, 49485, 49592
Valid prediction for snap_scaffold_24-snap.214-T1
Valid prediction for GeneMark_model.92524_t
Valid prediction for GlimmerHMM_glimmerT_53228-T1
Valid prediction for snap_scaffold_24-snap.255-T1
Valid prediction for snap_scaffold_24-snap.252-T1
Valid prediction for GlimmerHMM_glimmerT_53224-T1
Valid prediction for GeneMark_model.92522_t
Valid prediction for GeneMark_model.92512_t
Valid prediction for GlimmerHMM_glimmerT_53215-T1
Valid prediction for GeneMark_model.92518_t
Valid prediction for snap_scaffold_24-snap.229-T1
Valid prediction for GeneMark_model.92534_t
Valid prediction for snap_scaffold_24-snap.247-T1
Valid prediction for GlimmerHMM_glimmerT_53234-T1
Valid prediction for Augustus_model.g35657.t1
Valid prediction for snap_scaffold_24-snap.217-T1
Valid prediction for GlimmerHMM_glimmerT_53230-T1
Valid prediction for GeneMark_model.92547_t
Valid prediction for snap_scaffold_24-snap.241-T1
Valid prediction for GeneMark_model.92528_t
Valid prediction for Augustus_model.g35668.t1
Valid prediction for GlimmerHMM_glimmerT_53208-T1
Valid prediction for GeneMark_model.92514_t
Valid prediction for snap_scaffold_24-snap.250-T1
Valid prediction for snap_scaffold_24-snap.225-T1
Valid prediction for GeneMark_model.92545_t
Valid prediction for GeneMark_model.92502_t
Valid prediction for GeneMark_model.92539_t
Valid prediction for snap_scaffold_24-snap.245-T1
Valid prediction for snap_scaffold_24-snap.256-T1
Valid prediction for Augustus_model.g35666.t1
Valid prediction for snap_scaffold_24-snap.233-T1
Valid prediction for GeneMark_model.92543_t
Valid prediction for snap_scaffold_24-snap.242-T1
Valid prediction for GlimmerHMM_glimmerT_53209-T1
Valid prediction for snap_scaffold_24-snap.235-T1
Valid prediction for snap_scaffold_24-snap.228-T1
Valid prediction for Augustus_model.g35670.t1
Valid prediction for GeneMark_model.92560_t
Valid prediction for Augustus_model.g35661.t1
Valid prediction for GlimmerHMM_glimmerT_53232-T1
Valid prediction for snap_scaffold_24-snap.209-T1
Valid prediction for GeneMark_model.92535_t
Valid prediction for GeneMark_model.92531_t
Valid prediction for GlimmerHMM_glimmerT_53212-T1
Valid prediction for GeneMark_model.92526_t
Valid prediction for GlimmerHMM_glimmerT_53211-T1
Valid prediction for GeneMark_model.92519_t
Valid prediction for GeneMark_model.92529_t
Valid prediction for HiQ_model.g35664.t1
Valid prediction for pasa_asmbl_32703.p1
Valid prediction for snap_scaffold_24-snap.212-T1
Valid prediction for Augustus_model.g35656.t1
Valid prediction for GeneMark_model.92505_t
Valid prediction for GeneMark_model.92532_t
Valid prediction for GeneMark_model.92521_t
Valid prediction for GlimmerHMM_glimmerT_53231-T1
Valid prediction for GlimmerHMM_glimmerT_53239-T1
Valid prediction for snap_scaffold_24-snap.231-T1
Valid prediction for snap_scaffold_24-snap.219-T1
Valid prediction for CodingQuarry_transcript_37159-T1
Valid prediction for snap_scaffold_24-snap.218-T1
Valid prediction for snap_scaffold_24-snap.236-T1
Couldn't classify 3246, 3347
Couldn't classify 8733, 8843
Sorry, prediction pasa_asmbl_32705.p1 fails validation.
(GAG)	 AG	3246-3347	GT	TGG
(TTC)	 AG	4241-4407	GT	AGG
(AAC)	 AG	5506-5616	GT	TGG
(GAG)	 AG	7411-7461	GT	AAG
(TAA)	 AG	7802-8009	GT	GGG
(GAG)	 AG	8733-8843	GA	AGG
-recovered pasa_asmbl_32705.p1, internal, 3246, 3347
-recovered pasa_asmbl_32705.p1, internal, 4241, 4407
-recovered pasa_asmbl_32705.p1, internal, 5506, 5616
-recovered pasa_asmbl_32705.p1, internal, 7411, 7461
-recovered pasa_asmbl_32705.p1, internal, 7802, 8009
Valid prediction for GeneMark_model.92555_t
Valid prediction for GeneMark_model.92551_t
Valid prediction for Augustus_model.g35671.t1
Valid prediction for GeneMark_model.92507_t
Valid prediction for snap_scaffold_24-snap.237-T1
Valid prediction for GeneMark_model.92558_t
Valid prediction for GlimmerHMM_glimmerT_53218-T1
Valid prediction for snap_scaffold_24-snap.234-T1
Valid prediction for GlimmerHMM_glimmerT_53220-T1
Valid prediction for GeneMark_model.92541_t
Valid prediction for GeneMark_model.92552_t
Valid prediction for snap_scaffold_24-snap.244-T1
Valid prediction for snap_scaffold_24-snap.215-T1
Valid prediction for snap_scaffold_24-snap.222-T1
Valid prediction for GeneMark_model.92503_t
Valid prediction for GlimmerHMM_glimmerT_53236-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 19247, rend_intergenic: 13289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28793, rend_intergenic: 20156  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43768, rend_intergenic: 32066  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47219, rend_intergenic: 43768  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53235, rend_intergenic: 52389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54608, rend_intergenic: 53298  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63965, rend_intergenic: 54862  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66049, rend_intergenic: 64467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77987, rend_intergenic: 69106  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82516, rend_intergenic: 80891  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90467, rend_intergenic: 88493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92270, rend_intergenic: 90502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112003, rend_intergenic: 92469  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114753, rend_intergenic: 113204  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123896, rend_intergenic: 118008  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133760, rend_intergenic: 131073  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139304, rend_intergenic: 134894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141912, rend_intergenic: 140750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148848, rend_intergenic: 145082  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155122, rend_intergenic: 153519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165215, rend_intergenic: 158800  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182266, rend_intergenic: 165563  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 184522
-exon list size: 873


building trellis

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55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.7    
99.8    
99.9    
-found 44 predictions from path traversal
Error with prediction: snap lend_intergenic: 19247, rend_intergenic: 13289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28793, rend_intergenic: 20156  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43768, rend_intergenic: 32066  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47219, rend_intergenic: 43768  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53235, rend_intergenic: 52389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54608, rend_intergenic: 53298  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63965, rend_intergenic: 54862  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66049, rend_intergenic: 64467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77987, rend_intergenic: 69106  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82516, rend_intergenic: 80891  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90467, rend_intergenic: 88493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92270, rend_intergenic: 90502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112003, rend_intergenic: 92469  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114753, rend_intergenic: 113204  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123896, rend_intergenic: 118008  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133760, rend_intergenic: 131073  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139304, rend_intergenic: 134894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141912, rend_intergenic: 140750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148848, rend_intergenic: 145082  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155122, rend_intergenic: 153519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165215, rend_intergenic: 158800  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182266, rend_intergenic: 165563  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 20 predictions persist after filtering for low support