-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_8713739-8898258

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for CodingQuarry_transcript_37312-T1
Valid prediction for CodingQuarry_transcript_37317-T1
Valid prediction for snap_scaffold_24-snap.1823-T1
Valid prediction for GlimmerHMM_glimmerT_54331-T1
Valid prediction for snap_scaffold_24-snap.1826-T1
Valid prediction for GlimmerHMM_glimmerT_54338-T1
Valid prediction for GeneMark_model.94720_t
Valid prediction for GeneMark_model.94710_t
Valid prediction for snap_scaffold_24-snap.1814-T1
Valid prediction for GeneMark_model.94706_t
Valid prediction for GlimmerHMM_glimmerT_54346-T1
Valid prediction for GeneMark_model.94709_t
Valid prediction for pasa_asmbl_32453.p1
Valid prediction for snap_scaffold_24-snap.1820-T1
Valid prediction for GeneMark_model.94703_t
Valid prediction for GlimmerHMM_glimmerT_54344-T1
Valid prediction for pasa_asmbl_32446.p1
Valid prediction for snap_scaffold_24-snap.1829-T1
Valid prediction for Augustus_model.g36378.t1
Valid prediction for HiQ_model.g36374.t1
Couldn't classify 144548, 144587
Sorry, prediction pasa_asmbl_32626.p1 fails validation.
(ATG)	 GG	144003-144271	GT	CTG
(GGA)	 AG	144548-144587	CG	CTC
-recovered pasa_asmbl_32626.p1, initial, 144003, 144271
Valid prediction for GlimmerHMM_glimmerT_54343-T1
Valid prediction for CodingQuarry_transcript_37315-T1
Valid prediction for GeneMark_model.94726_t
Valid prediction for GlimmerHMM_glimmerT_54342-T1
Valid prediction for snap_scaffold_24-snap.1821-T1
Valid prediction for Augustus_model.g36381.t1
Valid prediction for Augustus_model.g36375.t1
Valid prediction for GeneMark_model.94716_t
Valid prediction for Augustus_model.g36379.t1
Valid prediction for snap_scaffold_24-snap.1817-T1
Valid prediction for pasa_asmbl_32451.p1
Valid prediction for GlimmerHMM_glimmerT_54339-T1
Valid prediction for GlimmerHMM_glimmerT_54327-T1
Valid prediction for HiQ_model.g36369.t1
Couldn't classify 146658, 146750
Couldn't classify 152522, 152866
Sorry, prediction pasa_asmbl_32456.p1 fails validation.
(GCA)	 TG	146658-146750	GT	AGG
(TTT)	 AG	148981-149074	GT	AGG
(AAA)	 AG	150093-150265	GT	AGG
(GAA)	 AG	150441-150539	GT	AGG
(GAG)	 AG	150847-151011	GT	AGG
(GCA)	 AG	151210-151309	GT	CAG
(ACT)	 AG	151398-151552	GT	TGG
(GTG)	 AG	151745-151867	GT	AGG
(GTG)	 AG	152117-152299	GT	AGG
(GTC)	 AG	152522-152866	AC	AGA
add_exon() Sorry, pasa_asmbl_32456.p1 148981-149074-terminal-3 is invalid.
-recovered pasa_asmbl_32456.p1, terminal, 148981, 149074
-recovered pasa_asmbl_32456.p1, internal, 148981, 149074
-recovered pasa_asmbl_32456.p1, internal, 150093, 150265
-recovered pasa_asmbl_32456.p1, internal, 150441, 150539
-recovered pasa_asmbl_32456.p1, internal, 150847, 151011
-recovered pasa_asmbl_32456.p1, internal, 151210, 151309
-recovered pasa_asmbl_32456.p1, internal, 151398, 151552
-recovered pasa_asmbl_32456.p1, internal, 151745, 151867
-recovered pasa_asmbl_32456.p1, internal, 152117, 152299
Valid prediction for GlimmerHMM_glimmerT_54347-T1
Couldn't classify 97413, 97599
Sorry, prediction pasa_asmbl_32455.p1 fails validation.
(ATT)	 TG	97413-97599	GT	AGG
(GTC)	 AG	97703-97864	GT	AGG
(GGA)	 AG	98217-98293	GT	AGG
(GCT)	 AG	98415-98543	GT	GAG
(GAT)	 AG	98974-99078	AA	GAA
add_exon() Sorry, pasa_asmbl_32455.p1 97703-97864-terminal-1 is invalid.
-recovered pasa_asmbl_32455.p1, terminal, 97703, 97864
-recovered pasa_asmbl_32455.p1, terminal, 98974, 99078
-recovered pasa_asmbl_32455.p1, internal, 97703, 97864
-recovered pasa_asmbl_32455.p1, internal, 98217, 98293
-recovered pasa_asmbl_32455.p1, internal, 98415, 98543
Valid prediction for GeneMark_model.94713_t
Valid prediction for GeneMark_model.94727_t
Valid prediction for GeneMark_model.94730_t
Valid prediction for GlimmerHMM_glimmerT_54341-T1
Valid prediction for snap_scaffold_24-snap.1835-T1
Valid prediction for GeneMark_model.94715_t
Valid prediction for snap_scaffold_24-snap.1833-T1
Valid prediction for HiQ_model.g36377.t1
Valid prediction for snap_scaffold_24-snap.1807-T1
Valid prediction for HiQ_model.g36371.t1
Valid prediction for GlimmerHMM_glimmerT_54333-T1
Valid prediction for GeneMark_model.94722_t
Valid prediction for GeneMark_model.94724_t
Valid prediction for snap_scaffold_24-snap.1831-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_24-snap.1834-T1
Valid prediction for snap_scaffold_24-snap.1832-T1
Valid prediction for GeneMark_model.94708_t
Valid prediction for snap_scaffold_24-snap.1824-T1
Valid prediction for CodingQuarry_transcript_37314-T1
Valid prediction for snap_scaffold_24-snap.1812-T1
Valid prediction for snap_scaffold_24-snap.1819-T1
Valid prediction for snap_scaffold_24-snap.1818-T1
Valid prediction for snap_scaffold_24-snap.1811-T1
Valid prediction for Augustus_model.g36367.t1
Valid prediction for snap_scaffold_24-snap.1813-T1
Valid prediction for GeneMark_model.94725_t
Valid prediction for GlimmerHMM_glimmerT_54349-T1
Valid prediction for Augustus_model.g36383.t1
Couldn't classify 116863, 116880
Sorry, prediction pasa_asmbl_33100.p1 fails validation.
(GAC)	 CT	116863-116880	GT	AGG
(GTG)	 AG	117067-117185	GT	GGG
(GCC)	 AG	117506-117670	GT	AGG
(CAT)	 AG	117942-118056	GT	TGG
(AAT)	 AG	118545-118688	GT	AGG
(CTC)	 AG	118888-119101	GT	TGG
(CGG)	 AG	119413-119530	GC	AGG
(GAC)	 AG	119640-119796	GT	AGG
(GAG)	 AG	120097-120239	GT	AGG
(GTA)	 AG	120479-120653	GT	CTG
(GGA)	 AG	120752-120833	GT	AGG
(CAC)	 AG	121056-121220	GT	AGG
(GTC)	 AG	121334-121554	GT	AGG
(GAC)	 AG	121753-121872	AG	AGA
-recovered pasa_asmbl_33100.p1, terminal, 121753, 121872
-recovered pasa_asmbl_33100.p1, internal, 117067, 117185
-recovered pasa_asmbl_33100.p1, internal, 117506, 117670
-recovered pasa_asmbl_33100.p1, internal, 117942, 118056
-recovered pasa_asmbl_33100.p1, internal, 118545, 118688
-recovered pasa_asmbl_33100.p1, internal, 118888, 119101
-recovered pasa_asmbl_33100.p1, internal, 119413, 119530
-recovered pasa_asmbl_33100.p1, internal, 119640, 119796
-recovered pasa_asmbl_33100.p1, internal, 120097, 120239
-recovered pasa_asmbl_33100.p1, internal, 120479, 120653
-recovered pasa_asmbl_33100.p1, internal, 120752, 120833
-recovered pasa_asmbl_33100.p1, internal, 121056, 121220
-recovered pasa_asmbl_33100.p1, internal, 121334, 121554
Valid prediction for GeneMark_model.94717_t
Valid prediction for CodingQuarry_transcript_37313-T1
Valid prediction for GlimmerHMM_glimmerT_54336-T1
Valid prediction for snap_scaffold_24-snap.1837-T1
Valid prediction for snap_scaffold_24-snap.1816-T1
Valid prediction for GlimmerHMM_glimmerT_54335-T1
Valid prediction for snap_scaffold_24-snap.1830-T1
Valid prediction for GlimmerHMM_glimmerT_54345-T1
Valid prediction for GlimmerHMM_glimmerT_54332-T1
Valid prediction for GeneMark_model.94714_t
Valid prediction for CodingQuarry_transcript_37308-T1
Valid prediction for snap_scaffold_24-snap.1827-T1
Valid prediction for Augustus_model.g36366.t1
Valid prediction for HiQ_model.g36373.t1
Couldn't classify 136420, 136575
Couldn't classify 137720, 137797
Sorry, prediction pasa_asmbl_33098.p1 fails validation.
(GAA)	 GG	136420-136575	GT	AGG
(GCT)	 AG	137443-137574	GT	AGG
(TTT)	 AG	137720-137797	AA	CCA
-recovered pasa_asmbl_33098.p1, internal, 137443, 137574
Valid prediction for GeneMark_model.94705_t
Valid prediction for GlimmerHMM_glimmerT_54348-T1
Valid prediction for snap_scaffold_24-snap.1836-T1
Valid prediction for GeneMark_model.94707_t
Couldn't classify 20629, 20636
Couldn't classify 23224, 23248
Sorry, prediction pasa_asmbl_33106.p1 fails validation.
(ATC)	 AC	20629-20636	GT	AGG
(AGA)	 AG	20820-20918	GT	AGG
(GAA)	 AG	21373-21553	GT	AGG
(GAC)	 AG	21817-21942	GT	AGG
(GAG)	 AG	22445-22587	GT	AGG
(AAT)	 AG	22687-22863	GT	GTG
(GTG)	 AG	22944-23015	GT	GAG
(CCC)	 AG	23224-23248	GA	AGG
-recovered pasa_asmbl_33106.p1, internal, 20820, 20918
-recovered pasa_asmbl_33106.p1, internal, 21373, 21553
-recovered pasa_asmbl_33106.p1, internal, 21817, 21942
-recovered pasa_asmbl_33106.p1, internal, 22445, 22587
-recovered pasa_asmbl_33106.p1, internal, 22687, 22863
-recovered pasa_asmbl_33106.p1, internal, 22944, 23015
Valid prediction for snap_scaffold_24-snap.1838-T1
Valid prediction for snap_scaffold_24-snap.1825-T1
Valid prediction for Augustus_model.g36370.t1
Valid prediction for pasa_asmbl_33102.p1
Valid prediction for GlimmerHMM_glimmerT_54334-T1
Valid prediction for GlimmerHMM_glimmerT_54330-T1
Valid prediction for snap_scaffold_24-snap.1815-T1
Valid prediction for GeneMark_model.94702_t
Valid prediction for GeneMark_model.94711_t
Valid prediction for Augustus_model.g36382.t1
Valid prediction for GlimmerHMM_glimmerT_54328-T1
Valid prediction for snap_scaffold_24-snap.1828-T1
Valid prediction for GlimmerHMM_glimmerT_54329-T1
Valid prediction for GlimmerHMM_glimmerT_54337-T1
Valid prediction for GeneMark_model.94721_t
Valid prediction for Augustus_model.g36376.t1
Valid prediction for Augustus_model.g36380.t1
Valid prediction for GeneMark_model.94718_t
Valid prediction for GeneMark_model.94719_t
Valid prediction for GeneMark_model.94728_t
Couldn't classify 1405, 1612
Couldn't classify 5447, 5523
Sorry, prediction pasa_asmbl_33108.p1 fails validation.
(GCT)	 GA	1405-1612	GT	AGG
(GTG)	 AG	2715-2853	GT	AAG
(CTT)	 AG	2952-3084	GT	AGG
(GTG)	 AG	3315-3480	GT	CGG
(ACG)	 AG	3622-3723	GT	CGG
(GGG)	 AG	3818-3940	GT	CAG
(CTC)	 AG	4196-4308	GT	AGG
(GTC)	 AG	4604-4782	GT	AGG
(CCT)	 AG	5080-5204	GT	AGG
(CTG)	 AG	5447-5523	GA	ACG
-recovered pasa_asmbl_33108.p1, internal, 2715, 2853
-recovered pasa_asmbl_33108.p1, internal, 2952, 3084
-recovered pasa_asmbl_33108.p1, internal, 3315, 3480
-recovered pasa_asmbl_33108.p1, internal, 3622, 3723
-recovered pasa_asmbl_33108.p1, internal, 3818, 3940
-recovered pasa_asmbl_33108.p1, internal, 4196, 4308
-recovered pasa_asmbl_33108.p1, internal, 4604, 4782
-recovered pasa_asmbl_33108.p1, internal, 5080, 5204
Couldn't classify 142349, 142482
Sorry, prediction pasa_asmbl_33093.p1 fails validation.
(CAG)	 TC	142349-142482	GT	GGG
(GTC)	 AG	144043-144199	GT	AGG
(GTG)	 AG	146250-146363	GT	AGG
(GAG)	 AG	147093-147173	GT	AGG
(GAG)	 AG	147410-147595	CT	AGC
-recovered pasa_asmbl_33093.p1, terminal, 147410, 147595
-recovered pasa_asmbl_33093.p1, internal, 144043, 144199
-recovered pasa_asmbl_33093.p1, internal, 146250, 146363
-recovered pasa_asmbl_33093.p1, internal, 147093, 147173
Valid prediction for GeneMark_model.94712_t
Valid prediction for snap_scaffold_24-snap.1839-T1
Valid prediction for GeneMark_model.94729_t
Valid prediction for GeneMark_model.94723_t
Valid prediction for pasa_asmbl_33085.p1
Valid prediction for Augustus_model.g36372.t1
Couldn't classify 5973, 6098
Sorry, prediction pasa_asmbl_33107.p1 fails validation.
(AGC)	 TC	5973-6098	GT	TGG
(AGT)	 AG	6285-6407	GT	AGG
(AGC)	 AG	6697-6833	GT	AAG
(GCG)	 AG	7171-7355	GT	AGG
(ACA)	 AG	7583-8643	CT	GAC
-recovered pasa_asmbl_33107.p1, terminal, 7583, 8643
-recovered pasa_asmbl_33107.p1, internal, 6285, 6407
-recovered pasa_asmbl_33107.p1, internal, 6697, 6833
-recovered pasa_asmbl_33107.p1, internal, 7171, 7355
Valid prediction for snap_scaffold_24-snap.1822-T1
Valid prediction for GeneMark_model.94704_t
Valid prediction for GlimmerHMM_glimmerT_54340-T1
Couldn't classify 115484, 115564
Sorry, prediction pasa_asmbl_33101.p1 fails validation.
(ATG)	 AG	112878-113048	GT	AGG
(GTG)	 AG	113525-113667	GT	AGG
(TTA)	 AG	113918-114007	GT	AGG
(CCA)	 AG	114116-114283	GT	AGG
(GCA)	 AG	114454-114634	GT	AGG
(GAC)	 AG	114998-115159	GT	AGG
(ACC)	 AG	115484-115564	TC	ACT
-recovered pasa_asmbl_33101.p1, initial, 112878, 113048
-recovered pasa_asmbl_33101.p1, internal, 112878, 113048
-recovered pasa_asmbl_33101.p1, internal, 113525, 113667
-recovered pasa_asmbl_33101.p1, internal, 113918, 114007
-recovered pasa_asmbl_33101.p1, internal, 114116, 114283
-recovered pasa_asmbl_33101.p1, internal, 114454, 114634
-recovered pasa_asmbl_33101.p1, internal, 114998, 115159
Valid prediction for snap_scaffold_24-snap.1809-T1
Couldn't classify 27483, 27542
Couldn't classify 28458, 28481
Sorry, prediction pasa_asmbl_33267.p1 fails validation.
(GGA)	 CA	27483-27542	GT	AGG
(TCC)	 AG	27725-27814	GT	CTG
(TGT)	 AG	28086-28238	GT	GGG
(GAA)	 AG	28458-28481	AA	ACA
-recovered pasa_asmbl_33267.p1, internal, 27725, 27814
-recovered pasa_asmbl_33267.p1, internal, 28086, 28238
Valid prediction for snap_scaffold_24-snap.1810-T1
Valid prediction for Augustus_model.g36368.t1
Valid prediction for Augustus_model.g36384.t1
Valid prediction for snap_scaffold_24-snap.1808-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 12248, rend_intergenic: 4139  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120668, rend_intergenic: 118413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138900, rend_intergenic: 136809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149154, rend_intergenic: 145285  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 184520
-exon list size: 444


building trellis

0.2    
0.4    
0.7    
0.9    
1.1    
1.3    
1.6    
1.8    
2.0    
2.2    
2.5    
2.7    
2.9    
3.1    
3.4    
3.6    
3.8    
4.0    
4.3    
4.5    
4.7    
4.9    
5.2    
5.4    
5.6    
5.8    
6.1    
6.3    
6.5    
6.7    
7.0    
7.2    
7.4    
7.6    
7.8    
8.1    
8.3    
8.5    
8.7    
9.0    
9.2    
9.4    
9.6    
9.9    
10.1    
10.3    
10.5    
10.8    
11.0    
11.2    
11.4    
11.7    
11.9    
12.1    
12.3    
12.6    
12.8    
13.0    
13.2    
13.5    
13.7    
13.9    
14.1    
14.3    
14.6    
14.8    
15.0    
15.2    
15.5    
15.7    
15.9    
16.1    
16.4    
16.6    
16.8    
17.0    
17.3    
17.5    
17.7    
17.9    
18.2    
18.4    
18.6    
18.8    
19.1    
19.3    
19.5    
19.7    
20.0    
20.2    
20.4    
20.6    
20.9    
21.1    
21.3    
21.5    
21.7    
22.0    
22.2    
22.4    
22.6    
22.9    
23.1    
23.3    
23.5    
23.8    
24.0    
24.2    
24.4    
24.7    
24.9    
25.1    
25.3    
25.6    
25.8    
26.0    
26.2    
26.5    
26.7    
26.9    
27.1    
27.4    
27.6    
27.8    
28.0    
28.3    
28.5    
28.7    
28.9    
29.1    
29.4    
29.6    
29.8    
30.0    
30.3    
30.5    
30.7    
30.9    
31.2    
31.4    
31.6    
31.8    
32.1    
32.3    
32.5    
32.7    
33.0    
33.2    
33.4    
33.6    
33.9    
34.1    
34.3    
34.5    
34.8    
35.0    
35.2    
35.4    
35.7    
35.9    
36.1    
36.3    
36.5    
36.8    
37.0    
37.2    
37.4    
37.7    
37.9    
38.1    
38.3    
38.6    
38.8    
39.0    
39.2    
39.5    
39.7    
39.9    
40.1    
40.4    
40.6    
40.8    
41.0    
41.3    
41.5    
41.7    
41.9    
42.2    
42.4    
42.6    
42.8    
43.0    
43.3    
43.5    
43.7    
43.9    
44.2    
44.4    
44.6    
44.8    
45.1    
45.3    
45.5    
45.7    
46.0    
46.2    
46.4    
46.6    
46.9    
47.1    
47.3    
47.5    
47.8    
48.0    
48.2    
48.4    
48.7    
48.9    
49.1    
49.3    
49.6    
49.8    
50.0    
50.2    
50.4    
50.7    
50.9    
51.1    
51.3    
51.6    
51.8    
52.0    
52.2    
52.5    
52.7    
52.9    
53.1    
53.4    
53.6    
53.8    
54.0    
54.3    
54.5    
54.7    
54.9    
55.2    
55.4    
55.6    
55.8    
56.1    
56.3    
56.5    
56.7    
57.0    
57.2    
57.4    
57.6    
57.8    
58.1    
58.3    
58.5    
58.7    
59.0    
59.2    
59.4    
59.6    
59.9    
60.1    
60.3    
60.5    
60.8    
61.0    
61.2    
61.4    
61.7    
61.9    
62.1    
62.3    
62.6    
62.8    
63.0    
63.2    
63.5    
63.7    
63.9    
64.1    
64.3    
64.6    
64.8    
65.0    
65.2    
65.5    
65.7    
65.9    
66.1    
66.4    
66.6    
66.8    
67.0    
67.3    
67.5    
67.7    
67.9    
68.2    
68.4    
68.6    
68.8    
69.1    
69.3    
69.5    
69.7    
70.0    
70.2    
70.4    
70.6    
70.9    
71.1    
71.3    
71.5    
71.7    
72.0    
72.2    
72.4    
72.6    
72.9    
73.1    
73.3    
73.5    
73.8    
74.0    
74.2    
74.4    
74.7    
74.9    
75.1    
75.3    
75.6    
75.8    
76.0    
76.2    
76.5    
76.7    
76.9    
77.1    
77.4    
77.6    
77.8    
78.0    
78.3    
78.5    
78.7    
78.9    
79.1    
79.4    
79.6    
79.8    
80.0    
80.3    
80.5    
80.7    
80.9    
81.2    
81.4    
81.6    
81.8    
82.1    
82.3    
82.5    
82.7    
83.0    
83.2    
83.4    
83.6    
83.9    
84.1    
84.3    
84.5    
84.8    
85.0    
85.2    
85.4    
85.7    
85.9    
86.1    
86.3    
86.5    
86.8    
87.0    
87.2    
87.4    
87.7    
87.9    
88.1    
88.3    
88.6    
88.8    
89.0    
89.2    
89.5    
89.7    
89.9    
90.1    
90.4    
90.6    
90.8    
91.0    
91.3    
91.5    
91.7    
91.9    
92.2    
92.4    
92.6    
92.8    
93.0    
93.3    
93.5    
93.7    
93.9    
94.2    
94.4    
94.6    
94.8    
95.1    
95.3    
95.5    
95.7    
96.0    
96.2    
96.4    
96.6    
96.9    
97.1    
97.3    
97.5    
97.8    
98.0    
98.2    
98.4    
98.7    
98.9    
99.1    
99.3    
99.6    
99.8    
-found 24 predictions from path traversal
Error with prediction: snap lend_intergenic: 12248, rend_intergenic: 4139  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120668, rend_intergenic: 118413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138900, rend_intergenic: 136809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149154, rend_intergenic: 145285  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 19318
-exon list size: 26


building trellis

3.6    
7.1    
10.7    
14.3    
17.9    
21.4    
25.0    
28.6    
32.1    
35.7    
39.3    
42.9    
46.4    
50.0    
53.6    
57.1    
60.7    
64.3    
67.9    
71.4    
75.0    
78.6    
82.1    
85.7    
89.3    
92.9    
96.4    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 4147 - 19318
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 5678 - 19318
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support