-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_8302102-8567210

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_54285-T1
Valid prediction for GeneMark_model.94624_t
Valid prediction for GlimmerHMM_glimmerT_54293-T1
Valid prediction for snap_scaffold_24-snap.1768-T1
Valid prediction for GlimmerHMM_glimmerT_54275-T1
Valid prediction for GeneMark_model.94618_t
Valid prediction for Augustus_model.g36331.t1
Valid prediction for GeneMark_model.94631_t
Valid prediction for GlimmerHMM_glimmerT_54302-T1
Valid prediction for GeneMark_model.94654_t
Valid prediction for GlimmerHMM_glimmerT_54307-T1
Valid prediction for GeneMark_model.94637_t
Valid prediction for snap_scaffold_24-snap.1744-T1
Valid prediction for Augustus_model.g36329.t1
Valid prediction for snap_scaffold_24-snap.1745-T1
Valid prediction for snap_scaffold_24-snap.1769-T1
Valid prediction for GeneMark_model.94614_t
Valid prediction for GeneMark_model.94605_t
Valid prediction for snap_scaffold_24-snap.1724-T1
Valid prediction for Augustus_model.g36344.t1
Valid prediction for GlimmerHMM_glimmerT_54288-T1
Valid prediction for GeneMark_model.94658_t
Valid prediction for GlimmerHMM_glimmerT_54270-T1
Valid prediction for GeneMark_model.94640_t
Valid prediction for Augustus_model.g36336.t1
Valid prediction for GeneMark_model.94629_t
Valid prediction for GeneMark_model.94609_t
Valid prediction for snap_scaffold_24-snap.1759-T1
Valid prediction for GeneMark_model.94660_t
Valid prediction for GlimmerHMM_glimmerT_54292-T1
Valid prediction for GlimmerHMM_glimmerT_54298-T1
Valid prediction for GlimmerHMM_glimmerT_54306-T1
Valid prediction for GlimmerHMM_glimmerT_54290-T1
Valid prediction for GeneMark_model.94602_t
Valid prediction for GeneMark_model.94586_t
Valid prediction for snap_scaffold_24-snap.1726-T1
Valid prediction for GlimmerHMM_glimmerT_54283-T1
Valid prediction for snap_scaffold_24-snap.1739-T1
Valid prediction for GeneMark_model.94648_t
Valid prediction for snap_scaffold_24-snap.1742-T1
Valid prediction for snap_scaffold_24-snap.1728-T1
Valid prediction for snap_scaffold_24-snap.1734-T1
Valid prediction for GlimmerHMM_glimmerT_54267-T1
Valid prediction for GeneMark_model.94582_t
Valid prediction for GeneMark_model.94596_t
Valid prediction for GeneMark_model.94620_t
Valid prediction for GeneMark_model.94604_t
Valid prediction for snap_scaffold_24-snap.1721-T1
Valid prediction for GeneMark_model.94612_t
Valid prediction for Augustus_model.g36335.t1
Valid prediction for GeneMark_model.94600_t
Valid prediction for GeneMark_model.94642_t
Valid prediction for GlimmerHMM_glimmerT_54272-T1
Valid prediction for Augustus_model.g36333.t1
Valid prediction for snap_scaffold_24-snap.1723-T1
Valid prediction for HiQ_model.g36347.t1
Valid prediction for GeneMark_model.94611_t
Valid prediction for GlimmerHMM_glimmerT_54295-T1
Valid prediction for Augustus_model.g36342.t1
Valid prediction for GeneMark_model.94635_t
Valid prediction for GeneMark_model.94579_t
Valid prediction for GlimmerHMM_glimmerT_54286-T1
Valid prediction for GeneMark_model.94591_t
Valid prediction for Augustus_model.g36348.t1
Valid prediction for GeneMark_model.94583_t
Valid prediction for GeneMark_model.94588_t
Valid prediction for GlimmerHMM_glimmerT_54297-T1
Valid prediction for GeneMark_model.94627_t
Valid prediction for GeneMark_model.94666_t
Valid prediction for GlimmerHMM_glimmerT_54296-T1
Valid prediction for Augustus_model.g36341.t1
Valid prediction for GlimmerHMM_glimmerT_54303-T1
Valid prediction for GlimmerHMM_glimmerT_54284-T1
Valid prediction for Augustus_model.g36343.t1
Couldn't classify 255269, 255471
Sorry, prediction pasa_asmbl_32430.p1 fails validation.
(GGC)	 AA	255269-255471	GT	CGG
(TTC)	 AG	255768-255876	GT	AGG
(CTG)	 AG	256028-256081	GT	AGG
(AGC)	 AG	256278-256340	GT	AGG
(CTC)	 AG	256455-256505	GT	CAG
(GAG)	 AG	256660-256707	GT	CAG
(TTC)	 AG	257045-257140	GT	AGG
(ACC)	 AG	257433-257540	GT	TAG
(ACC)	 AG	257828-258010	AC	AGA
-recovered pasa_asmbl_32430.p1, terminal, 257828, 258010
-recovered pasa_asmbl_32430.p1, internal, 255768, 255876
-recovered pasa_asmbl_32430.p1, internal, 256028, 256081
-recovered pasa_asmbl_32430.p1, internal, 256278, 256340
-recovered pasa_asmbl_32430.p1, internal, 256455, 256505
-recovered pasa_asmbl_32430.p1, internal, 256660, 256707
-recovered pasa_asmbl_32430.p1, internal, 257045, 257140
-recovered pasa_asmbl_32430.p1, internal, 257433, 257540
Couldn't classify 235095, 235160
Couldn't classify 238405, 238464
Sorry, prediction pasa_asmbl_32670.p1 fails validation.
(GAT)	 TG	235095-235160	GT	AGG
(GTG)	 AG	237488-237591	GT	GAG
(GCC)	 AG	237976-238099	GT	AGG
(GGG)	 AG	238405-238464	GA	GAG
-recovered pasa_asmbl_32670.p1, internal, 237488, 237591
-recovered pasa_asmbl_32670.p1, internal, 237976, 238099
Valid prediction for GeneMark_model.94589_t
Valid prediction for GeneMark_model.94645_t
Valid prediction for GeneMark_model.94633_t
Valid prediction for GeneMark_model.94661_t
Valid prediction for GeneMark_model.94598_t
Valid prediction for snap_scaffold_24-snap.1737-T1
Valid prediction for GeneMark_model.94622_t
Valid prediction for Augustus_model.g36330.t1
Valid prediction for snap_scaffold_24-snap.1756-T1
Valid prediction for snap_scaffold_24-snap.1762-T1
Valid prediction for GeneMark_model.94607_t
Valid prediction for snap_scaffold_24-snap.1749-T1
Valid prediction for GeneMark_model.94652_t
Valid prediction for snap_scaffold_24-snap.1770-T1
Valid prediction for GeneMark_model.94595_t
Valid prediction for GlimmerHMM_glimmerT_54300-T1
Valid prediction for GeneMark_model.94616_t
Valid prediction for GeneMark_model.94593_t
Valid prediction for GlimmerHMM_glimmerT_54274-T1
Valid prediction for GlimmerHMM_glimmerT_54269-T1
Valid prediction for snap_scaffold_24-snap.1750-T1
Valid prediction for GeneMark_model.94650_t
Valid prediction for GlimmerHMM_glimmerT_54304-T1
Valid prediction for GeneMark_model.94619_t
Valid prediction for snap_scaffold_24-snap.1731-T1
Valid prediction for Augustus_model.g36339.t1
Valid prediction for Augustus_model.g36334.t1
Valid prediction for GeneMark_model.94665_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.94580_t
Valid prediction for snap_scaffold_24-snap.1757-T1
Valid prediction for snap_scaffold_24-snap.1764-T1
Valid prediction for Augustus_model.g36345.t1
Valid prediction for GeneMark_model.94613_t
Valid prediction for snap_scaffold_24-snap.1743-T1
Valid prediction for GeneMark_model.94621_t
Valid prediction for snap_scaffold_24-snap.1732-T1
Valid prediction for GeneMark_model.94594_t
Valid prediction for snap_scaffold_24-snap.1725-T1
Valid prediction for snap_scaffold_24-snap.1748-T1
Valid prediction for GeneMark_model.94644_t
Valid prediction for GlimmerHMM_glimmerT_54277-T1
Valid prediction for GeneMark_model.94590_t
Valid prediction for GlimmerHMM_glimmerT_54299-T1
Valid prediction for GeneMark_model.94646_t
Valid prediction for snap_scaffold_24-snap.1729-T1
Valid prediction for snap_scaffold_24-snap.1763-T1
Valid prediction for snap_scaffold_24-snap.1733-T1
Valid prediction for GlimmerHMM_glimmerT_54301-T1
Valid prediction for GeneMark_model.94581_t
Valid prediction for snap_scaffold_24-snap.1746-T1
Valid prediction for GeneMark_model.94625_t
Valid prediction for GeneMark_model.94663_t
Valid prediction for Augustus_model.g36332.t1
Valid prediction for HiQ_model.g36338.t1
Valid prediction for GeneMark_model.94584_t
Valid prediction for GeneMark_model.94641_t
Valid prediction for GeneMark_model.94636_t
Valid prediction for GeneMark_model.94632_t
Valid prediction for GlimmerHMM_glimmerT_54276-T1
Valid prediction for GeneMark_model.94615_t
Valid prediction for snap_scaffold_24-snap.1738-T1
Valid prediction for GeneMark_model.94603_t
Valid prediction for snap_scaffold_24-snap.1727-T1
Valid prediction for snap_scaffold_24-snap.1754-T1
Valid prediction for GeneMark_model.94628_t
Valid prediction for GeneMark_model.94626_t
Valid prediction for GeneMark_model.94643_t
Valid prediction for CodingQuarry_transcript_37303-T1
Valid prediction for GeneMark_model.94601_t
Valid prediction for snap_scaffold_24-snap.1751-T1
Valid prediction for snap_scaffold_24-snap.1741-T1
Valid prediction for GeneMark_model.94649_t
Valid prediction for GeneMark_model.94617_t
Valid prediction for snap_scaffold_24-snap.1722-T1
Valid prediction for snap_scaffold_24-snap.1736-T1
Valid prediction for snap_scaffold_24-snap.1761-T1
Valid prediction for GeneMark_model.94630_t
Valid prediction for GeneMark_model.94610_t
Valid prediction for snap_scaffold_24-snap.1753-T1
Valid prediction for snap_scaffold_24-snap.1730-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.94585_t
Valid prediction for GeneMark_model.94647_t
Valid prediction for snap_scaffold_24-snap.1735-T1
Valid prediction for GeneMark_model.94651_t
Valid prediction for GlimmerHMM_glimmerT_54289-T1
Valid prediction for GeneMark_model.94653_t
Valid prediction for snap_scaffold_24-snap.1766-T1
Valid prediction for GeneMark_model.94623_t
Valid prediction for GlimmerHMM_glimmerT_54278-T1
Valid prediction for snap_scaffold_24-snap.1752-T1
Valid prediction for snap_scaffold_24-snap.1758-T1
Valid prediction for Augustus_model.g36337.t1
Valid prediction for snap_scaffold_24-snap.1747-T1
Valid prediction for GeneMark_model.94592_t
Valid prediction for GeneMark_model.94657_t
Valid prediction for GlimmerHMM_glimmerT_54271-T1
Valid prediction for GlimmerHMM_glimmerT_54291-T1
Valid prediction for GeneMark_model.94606_t
Valid prediction for snap_scaffold_24-snap.1760-T1
Valid prediction for GlimmerHMM_glimmerT_54294-T1
Valid prediction for snap_scaffold_24-snap.1767-T1
Valid prediction for GlimmerHMM_glimmerT_54268-T1
Valid prediction for GeneMark_model.94608_t
Valid prediction for GlimmerHMM_glimmerT_54281-T1
Valid prediction for GlimmerHMM_glimmerT_54287-T1
Valid prediction for GeneMark_model.94587_t
Valid prediction for GeneMark_model.94638_t
Valid prediction for GeneMark_model.94599_t
Valid prediction for snap_scaffold_24-snap.1765-T1
Valid prediction for GeneMark_model.94639_t
Valid prediction for GlimmerHMM_glimmerT_54273-T1
Valid prediction for GlimmerHMM_glimmerT_54279-T1
Valid prediction for snap_scaffold_24-snap.1755-T1
Valid prediction for Augustus_model.g36340.t1
Valid prediction for CodingQuarry_transcript_37304-T1
Valid prediction for GlimmerHMM_glimmerT_54280-T1
Valid prediction for GeneMark_model.94655_t
Valid prediction for GlimmerHMM_glimmerT_54305-T1
Valid prediction for GeneMark_model.94664_t
Valid prediction for GeneMark_model.94597_t
Valid prediction for GlimmerHMM_glimmerT_54282-T1
Valid prediction for pasa_asmbl_33075.p1
Valid prediction for GeneMark_model.94634_t
Valid prediction for GeneMark_model.94659_t
Valid prediction for HiQ_model.g36346.t1
Valid prediction for snap_scaffold_24-snap.1740-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 20953, rend_intergenic: 18662  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34871, rend_intergenic: 22839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43907, rend_intergenic: 41058  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45480, rend_intergenic: 44126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52154, rend_intergenic: 46355  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61259, rend_intergenic: 54118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63618, rend_intergenic: 61286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72190, rend_intergenic: 69607  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80569, rend_intergenic: 72239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91104, rend_intergenic: 81208  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91310, rend_intergenic: 91230  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99740, rend_intergenic: 91330  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114840, rend_intergenic: 99741  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124556, rend_intergenic: 114960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150155, rend_intergenic: 139465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204622, rend_intergenic: 169381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208961, rend_intergenic: 205284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216919, rend_intergenic: 209458  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218235, rend_intergenic: 217437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223064, rend_intergenic: 218407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230170, rend_intergenic: 225270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 239716, rend_intergenic: 230298  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 98696, rend_intergenic: 98693  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 265109
-exon list size: 1233


building trellis

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36.0    
36.1    
36.2    
36.3    
36.4    
36.4    
36.5    
36.6    
36.7    
36.8    
36.8    
36.9    
37.0    
37.1    
37.2    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.7    
37.8    
37.9    
38.0    
38.1    
38.1    
38.2    
38.3    
38.4    
38.5    
38.5    
38.6    
38.7    
38.8    
38.9    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.4    
39.5    
39.6    
39.7    
39.8    
39.8    
39.9    
40.0    
40.1    
40.2    
40.2    
40.3    
40.4    
40.5    
40.6    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.1    
41.2    
41.3    
41.4    
41.5    
41.5    
41.6    
41.7    
41.8    
41.9    
41.9    
42.0    
42.1    
42.2    
42.3    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.8    
42.9    
43.0    
43.1    
43.2    
43.2    
43.3    
43.4    
43.5    
43.6    
43.6    
43.7    
43.8    
43.9    
44.0    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.5    
44.6    
44.7    
44.8    
44.9    
44.9    
45.0    
45.1    
45.2    
45.3    
45.3    
45.4    
45.5    
45.6    
45.7    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.2    
46.3    
46.4    
46.5    
46.6    
46.6    
46.7    
46.8    
46.9    
47.0    
47.0    
47.1    
47.2    
47.3    
47.4    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
47.9    
48.0    
48.1    
48.2    
48.3    
48.3    
48.4    
48.5    
48.6    
48.7    
48.7    
48.8    
48.9    
49.0    
49.1    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.6    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.4    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
50.9    
51.0    
51.1    
51.2    
51.3    
51.3    
51.4    
51.5    
51.6    
51.7    
51.7    
51.8    
51.9    
52.0    
52.1    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.6    
52.7    
52.8    
52.9    
53.0    
53.0    
53.1    
53.2    
53.3    
53.4    
53.4    
53.5    
53.6    
53.7    
53.8    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.3    
54.4    
54.5    
54.6    
54.7    
54.7    
54.8    
54.9    
55.0    
55.1    
55.1    
55.2    
55.3    
55.4    
55.5    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.0    
56.1    
56.2    
56.3    
56.4    
56.4    
56.5    
56.6    
56.7    
56.8    
56.8    
56.9    
57.0    
57.1    
57.2    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.7    
57.8    
57.9    
58.0    
58.1    
58.1    
58.2    
58.3    
58.4    
58.5    
58.5    
58.6    
58.7    
58.8    
58.9    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.4    
59.5    
59.6    
59.7    
59.8    
59.8    
59.9    
60.0    
60.1    
60.2    
60.2    
60.3    
60.4    
60.5    
60.6    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.1    
61.2    
61.3    
61.4    
61.5    
61.5    
61.6    
61.7    
61.8    
61.9    
61.9    
62.0    
62.1    
62.2    
62.3    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.8    
62.9    
63.0    
63.1    
63.2    
63.2    
63.3    
63.4    
63.5    
63.6    
63.6    
63.7    
63.8    
63.9    
64.0    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.5    
64.6    
64.7    
64.8    
64.9    
64.9    
65.0    
65.1    
65.2    
65.3    
65.3    
65.4    
65.5    
65.6    
65.7    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.2    
66.3    
66.4    
66.5    
66.6    
66.6    
66.7    
66.8    
66.9    
67.0    
67.0    
67.1    
67.2    
67.3    
67.4    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
67.9    
68.0    
68.1    
68.2    
68.3    
68.3    
68.4    
68.5    
68.6    
68.7    
68.7    
68.8    
68.9    
69.0    
69.1    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.6    
69.7    
69.8    
69.9    
70.0    
70.0    
70.1    
70.2    
70.3    
70.4    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
70.9    
71.0    
71.1    
71.2    
71.3    
71.3    
71.4    
71.5    
71.6    
71.7    
71.7    
71.8    
71.9    
72.0    
72.1    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.6    
72.7    
72.8    
72.9    
73.0    
73.0    
73.1    
73.2    
73.3    
73.4    
73.4    
73.5    
73.6    
73.7    
73.8    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.3    
74.4    
74.5    
74.6    
74.7    
74.7    
74.8    
74.9    
75.0    
75.1    
75.1    
75.2    
75.3    
75.4    
75.5    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.0    
76.1    
76.2    
76.3    
76.4    
76.4    
76.5    
76.6    
76.7    
76.8    
76.8    
76.9    
77.0    
77.1    
77.2    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.7    
77.8    
77.9    
78.0    
78.1    
78.1    
78.2    
78.3    
78.4    
78.5    
78.5    
78.6    
78.7    
78.8    
78.9    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.4    
79.5    
79.6    
79.7    
79.8    
79.8    
79.9    
80.0    
80.1    
80.2    
80.2    
80.3    
80.4    
80.5    
80.6    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.1    
81.2    
81.3    
81.4    
81.5    
81.5    
81.6    
81.7    
81.8    
81.9    
81.9    
82.0    
82.1    
82.2    
82.3    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.8    
82.9    
83.0    
83.1    
83.2    
83.2    
83.3    
83.4    
83.5    
83.6    
83.6    
83.7    
83.8    
83.9    
84.0    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.5    
84.6    
84.7    
84.8    
84.9    
84.9    
85.0    
85.1    
85.2    
85.3    
85.3    
85.4    
85.5    
85.6    
85.7    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.2    
86.3    
86.4    
86.5    
86.6    
86.6    
86.7    
86.8    
86.9    
87.0    
87.0    
87.1    
87.2    
87.3    
87.4    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
87.9    
88.0    
88.1    
88.2    
88.3    
88.3    
88.4    
88.5    
88.6    
88.7    
88.7    
88.8    
88.9    
89.0    
89.1    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.6    
89.7    
89.8    
89.9    
90.0    
90.0    
90.1    
90.2    
90.3    
90.4    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
90.9    
91.0    
91.1    
91.2    
91.3    
91.3    
91.4    
91.5    
91.6    
91.7    
91.7    
91.8    
91.9    
92.0    
92.1    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.6    
92.7    
92.8    
92.9    
93.0    
93.0    
93.1    
93.2    
93.3    
93.4    
93.4    
93.5    
93.6    
93.7    
93.8    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.3    
94.4    
94.5    
94.6    
94.7    
94.7    
94.8    
94.9    
95.0    
95.1    
95.1    
95.2    
95.3    
95.4    
95.5    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.0    
96.1    
96.2    
96.3    
96.4    
96.4    
96.5    
96.6    
96.7    
96.8    
96.8    
96.9    
97.0    
97.1    
97.2    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.7    
97.8    
97.9    
98.0    
98.1    
98.1    
98.2    
98.3    
98.4    
98.5    
98.5    
98.6    
98.7    
98.8    
98.9    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.4    
99.5    
99.6    
99.7    
99.8    
99.8    
99.9    
-found 51 predictions from path traversal
Error with prediction: snap lend_intergenic: 20953, rend_intergenic: 18662  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34871, rend_intergenic: 22839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43907, rend_intergenic: 41058  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45480, rend_intergenic: 44126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52154, rend_intergenic: 46355  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61259, rend_intergenic: 54118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63618, rend_intergenic: 61286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72190, rend_intergenic: 69607  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80569, rend_intergenic: 72239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91104, rend_intergenic: 81208  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91310, rend_intergenic: 91230  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99740, rend_intergenic: 91330  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114840, rend_intergenic: 99741  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124556, rend_intergenic: 114960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150155, rend_intergenic: 139465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204622, rend_intergenic: 169381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208961, rend_intergenic: 205284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216919, rend_intergenic: 209458  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218235, rend_intergenic: 217437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223064, rend_intergenic: 218407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230170, rend_intergenic: 225270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 239716, rend_intergenic: 230298  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 98696, rend_intergenic: 98693  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 18 predictions persist after filtering for low support