-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_5806394-6032739

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_53881-T1
Valid prediction for snap_scaffold_24-snap.1173-T1
Valid prediction for GeneMark_model.93932_t
Valid prediction for GlimmerHMM_glimmerT_53880-T1
Valid prediction for HiQ_model.g36055.t1
Valid prediction for HiQ_model.g36051.t1
Couldn't classify 84701, 84808
Sorry, prediction pasa_asmbl_32256.p1 fails validation.
(GAG)	 AG	84701-84808	GT	ACG
(GTA)	 AG	85058-85211	GT	TGG
(GTG)	 AG	85806-85873	GC	AGG
(GAG)	 AG	87943-88064	GT	AGG
(AGT)	 AG	88484-88610	GT	AGG
(GTT)	 AG	89044-89148	GT	CAG
(GAG)	 AG	89429-89531	GT	CGG
(AGA)	 AG	90433-90659	GT	AGG
(GTC)	 AG	90792-90965	GT	TGG
(GTG)	 AG	91158-91354	GT	CAG
(GGA)	 AG	91903-92071	AC	GAA
-recovered pasa_asmbl_32256.p1, terminal, 91903, 92071
-recovered pasa_asmbl_32256.p1, internal, 84701, 84808
-recovered pasa_asmbl_32256.p1, internal, 85058, 85211
-recovered pasa_asmbl_32256.p1, internal, 85806, 85873
-recovered pasa_asmbl_32256.p1, internal, 87943, 88064
-recovered pasa_asmbl_32256.p1, internal, 88484, 88610
-recovered pasa_asmbl_32256.p1, internal, 89044, 89148
-recovered pasa_asmbl_32256.p1, internal, 89429, 89531
-recovered pasa_asmbl_32256.p1, internal, 90433, 90659
-recovered pasa_asmbl_32256.p1, internal, 90792, 90965
-recovered pasa_asmbl_32256.p1, internal, 91158, 91354
Valid prediction for HiQ_model.g36062.t1
Valid prediction for snap_scaffold_24-snap.1180-T1
Valid prediction for snap_scaffold_24-snap.1153-T1
Couldn't classify 58065, 58210
Sorry, prediction pasa_asmbl_32248.p1 fails validation.
(TAC)	 GC	58065-58210	GT	AGG
(GTC)	 AG	58422-58482	GT	GTG
(AGC)	 AG	58586-58658	GT	TGG
(CAT)	 AG	59170-59273	GT	AGG
(TTG)	 AG	59460-59558	GT	AGG
(CAT)	 AG	59757-59828	GT	AGG
(GAT)	 AG	60080-60148	GT	TGG
(AAC)	 AG	60255-60354	GT	AGG
(AGC)	 AG	60686-60766	GT	AGG
(GTT)	 AG	61137-61236	GT	CTG
(GGT)	 AG	61789-61896	GT	GGG
(ATA)	 AG	62156-62171	CC	AAC
-recovered pasa_asmbl_32248.p1, terminal, 62156, 62171
-recovered pasa_asmbl_32248.p1, internal, 58422, 58482
-recovered pasa_asmbl_32248.p1, internal, 58586, 58658
-recovered pasa_asmbl_32248.p1, internal, 59170, 59273
-recovered pasa_asmbl_32248.p1, internal, 59460, 59558
-recovered pasa_asmbl_32248.p1, internal, 59757, 59828
-recovered pasa_asmbl_32248.p1, internal, 60080, 60148
-recovered pasa_asmbl_32248.p1, internal, 60255, 60354
-recovered pasa_asmbl_32248.p1, internal, 60686, 60766
-recovered pasa_asmbl_32248.p1, internal, 61137, 61236
-recovered pasa_asmbl_32248.p1, internal, 61789, 61896
Couldn't classify 33804, 34034
Couldn't classify 36353, 36559
Sorry, prediction pasa_asmbl_32245.p2 fails validation.
(CTG)	 TC	33804-34034	GT	TGG
(GTG)	 AG	36353-36559	CG	TGC
Valid prediction for GeneMark_model.93912_t
Valid prediction for CodingQuarry_transcript_37247-T1
Valid prediction for HiQ_model.g36057.t1
Valid prediction for snap_scaffold_24-snap.1183-T1
Valid prediction for snap_scaffold_24-snap.1159-T1
Valid prediction for GeneMark_model.93931_t
Valid prediction for GlimmerHMM_glimmerT_53877-T1
Valid prediction for snap_scaffold_24-snap.1156-T1
Valid prediction for GlimmerHMM_glimmerT_53863-T1
Valid prediction for snap_scaffold_24-snap.1157-T1
Valid prediction for GeneMark_model.93917_t
Valid prediction for snap_scaffold_24-snap.1186-T1
Valid prediction for snap_scaffold_24-snap.1165-T1
Valid prediction for CodingQuarry_transcript_37251-T1
Valid prediction for pasa_asmbl_32262.p1
Valid prediction for GlimmerHMM_glimmerT_53869-T1
Valid prediction for snap_scaffold_24-snap.1166-T1
Valid prediction for snap_scaffold_24-snap.1160-T1
Valid prediction for Augustus_model.g36059.t1
Valid prediction for CodingQuarry_transcript_37250-T1
Valid prediction for snap_scaffold_24-snap.1195-T1
Valid prediction for GlimmerHMM_glimmerT_53872-T1
Valid prediction for Augustus_model.g36048.t1
Valid prediction for snap_scaffold_24-snap.1177-T1
Valid prediction for snap_scaffold_24-snap.1187-T1
Couldn't classify 91903, 92067
Couldn't classify 92736, 92739
Sorry, prediction CodingQuarry_transcript_37246-T1 fails validation.
(ATG)	 AC	84800-84808	GT	ACG
(GTA)	 AG	85058-85211	GT	TGG
(GTG)	 AG	85806-85873	GC	AGG
(GAG)	 AG	87943-88064	GT	AGG
(AGT)	 AG	88484-88610	GT	AGG
(GTT)	 AG	89044-89148	GT	CAG
(GAG)	 AG	89429-89531	GT	CGG
(AGA)	 AG	90433-90659	GT	AGG
(GTC)	 AG	90792-90965	GT	TGG
(GTG)	 AG	91158-91354	GT	CAG
(GGA)	 AG	91903-92067	CT	ACC
(CTG)	 AC	92736-92739	AC	GAA
-recovered CodingQuarry_transcript_37246-T1, initial, 84800, 84808
-recovered CodingQuarry_transcript_37246-T1, internal, 85058, 85211
-recovered CodingQuarry_transcript_37246-T1, internal, 85806, 85873
-recovered CodingQuarry_transcript_37246-T1, internal, 87943, 88064
-recovered CodingQuarry_transcript_37246-T1, internal, 88484, 88610
-recovered CodingQuarry_transcript_37246-T1, internal, 89044, 89148
-recovered CodingQuarry_transcript_37246-T1, internal, 89429, 89531
-recovered CodingQuarry_transcript_37246-T1, internal, 90433, 90659
-recovered CodingQuarry_transcript_37246-T1, internal, 90792, 90965
-recovered CodingQuarry_transcript_37246-T1, internal, 91158, 91354
Valid prediction for GlimmerHMM_glimmerT_53878-T1
Couldn't classify 117960, 118021
Sorry, prediction pasa_asmbl_32259.p1 fails validation.
(ACT)	 AG	117960-118021	GT	CAG
(AGT)	 AG	118131-118245	GT	AGG
(GGC)	 AG	118405-118485	GT	CGG
(GGT)	 AG	118673-118768	GT	CTG
(AGC)	 AG	118936-119022	GT	TAG
(GGA)	 AG	119195-119275	TT	GAT
-recovered pasa_asmbl_32259.p1, terminal, 119195, 119275
-recovered pasa_asmbl_32259.p1, internal, 117960, 118021
-recovered pasa_asmbl_32259.p1, internal, 118131, 118245
-recovered pasa_asmbl_32259.p1, internal, 118405, 118485
-recovered pasa_asmbl_32259.p1, internal, 118673, 118768
-recovered pasa_asmbl_32259.p1, internal, 118936, 119022
Valid prediction for snap_scaffold_24-snap.1172-T1
Valid prediction for GeneMark_model.93941_t
Valid prediction for snap_scaffold_24-snap.1176-T1
Valid prediction for GeneMark_model.93935_t
Valid prediction for snap_scaffold_24-snap.1155-T1
Valid prediction for GlimmerHMM_glimmerT_53871-T1
Valid prediction for CodingQuarry_transcript_37248-T1
Valid prediction for GlimmerHMM_glimmerT_53875-T1
Valid prediction for snap_scaffold_24-snap.1185-T1
Valid prediction for snap_scaffold_24-snap.1179-T1
Valid prediction for GlimmerHMM_glimmerT_53865-T1
Valid prediction for GeneMark_model.93914_t
Valid prediction for HiQ_model.g36061.t1
Valid prediction for snap_scaffold_24-snap.1175-T1
Valid prediction for snap_scaffold_24-snap.1170-T1
Valid prediction for GeneMark_model.93918_t
Valid prediction for snap_scaffold_24-snap.1184-T1
Couldn't classify 116749, 116894
Sorry, prediction pasa_asmbl_32258.p1 fails validation.
(ATG)	 GG	112959-112983	GT	CGG
(ATG)	 AG	113524-113600	GT	AGG
(GCC)	 AG	114023-114197	GT	GAG
(TTG)	 AG	115023-115123	GT	CGG
(TGG)	 AG	115647-115744	GT	TCG
(CTT)	 AG	115858-115952	GT	AGG
(GAA)	 AG	116749-116894	AG	AGA
-recovered pasa_asmbl_32258.p1, initial, 112959, 112983
add_exon() Sorry, pasa_asmbl_32258.p1 113524-113600-initial-1 is invalid.
-recovered pasa_asmbl_32258.p1, initial, 113524, 113600
add_exon() Sorry, pasa_asmbl_32258.p1 114023-114197-terminal-3 is invalid.
-recovered pasa_asmbl_32258.p1, terminal, 114023, 114197
-recovered pasa_asmbl_32258.p1, internal, 113524, 113600
-recovered pasa_asmbl_32258.p1, internal, 114023, 114197
-recovered pasa_asmbl_32258.p1, internal, 115023, 115123
-recovered pasa_asmbl_32258.p1, internal, 115647, 115744
-recovered pasa_asmbl_32258.p1, internal, 115858, 115952
Valid prediction for GeneMark_model.93934_t
Valid prediction for GeneMark_model.93927_t
Valid prediction for GeneMark_model.93928_t
Valid prediction for snap_scaffold_24-snap.1158-T1
Valid prediction for HiQ_model.g36049.t1
Couldn't classify 81118, 81226
Sorry, prediction pasa_asmbl_32249.p1 fails validation.
(ATG)	 AC	78739-78892	GT	AGG
(AAA)	 AG	79031-79166	GT	AGG
(AAC)	 AG	79679-79841	GT	AGG
(ACC)	 AG	80613-80737	GT	AGG
(CCC)	 AG	81118-81226	GT	CGG
-recovered pasa_asmbl_32249.p1, initial, 78739, 78892
-recovered pasa_asmbl_32249.p1, internal, 79031, 79166
-recovered pasa_asmbl_32249.p1, internal, 79679, 79841
-recovered pasa_asmbl_32249.p1, internal, 80613, 80737
-recovered pasa_asmbl_32249.p1, internal, 81118, 81226
Valid prediction for GeneMark_model.93921_t
Valid prediction for snap_scaffold_24-snap.1182-T1
Couldn't classify 121987, 122113
Sorry, prediction pasa_asmbl_32260.p1 fails validation.
(TCA)	 CC	121987-122113	GT	AGG
(TGG)	 AG	122873-122958	GT	TGG
(CAA)	 AG	123115-123181	GT	TGG
(GTG)	 AG	123308-123369	GT	AGG
(CAC)	 AG	123526-123632	GT	AGG
(ACG)	 AG	123888-124008	AC	GAA
-recovered pasa_asmbl_32260.p1, terminal, 123888, 124008
-recovered pasa_asmbl_32260.p1, internal, 122873, 122958
-recovered pasa_asmbl_32260.p1, internal, 123115, 123181
-recovered pasa_asmbl_32260.p1, internal, 123308, 123369
-recovered pasa_asmbl_32260.p1, internal, 123526, 123632
Valid prediction for GeneMark_model.93925_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_24-snap.1178-T1
Valid prediction for GeneMark_model.93940_t
Valid prediction for pasa_asmbl_32904.p1
Valid prediction for snap_scaffold_24-snap.1162-T1
Valid prediction for GlimmerHMM_glimmerT_53874-T1
Valid prediction for snap_scaffold_24-snap.1167-T1
Valid prediction for Augustus_model.g36063.t1
Valid prediction for GeneMark_model.93937_t
Valid prediction for GlimmerHMM_glimmerT_53883-T1
Valid prediction for GlimmerHMM_glimmerT_53868-T1
Valid prediction for GeneMark_model.93923_t
Valid prediction for CodingQuarry_transcript_37245-T1
Valid prediction for GeneMark_model.93919_t
Valid prediction for GlimmerHMM_glimmerT_53882-T1
Valid prediction for GlimmerHMM_glimmerT_53879-T1
Valid prediction for snap_scaffold_24-snap.1190-T1
Valid prediction for snap_scaffold_24-snap.1193-T1
Valid prediction for GlimmerHMM_glimmerT_53876-T1
Valid prediction for GeneMark_model.93922_t
Valid prediction for snap_scaffold_24-snap.1163-T1
Valid prediction for CodingQuarry_transcript_37243-T1
Valid prediction for snap_scaffold_24-snap.1174-T1
Couldn't classify 122055, 122198
Sorry, prediction pasa_asmbl_32903.p1 fails validation.
(AGG)	 GC	122055-122198	GT	GGG
(GAT)	 AG	122459-122497	GT	AGG
(ATC)	 AG	122832-122938	GT	AGG
(GTT)	 AG	124132-124195	GT	AGG
(ATG)	 AG	124605-124767	GT	AGG
(GCT)	 AG	125414-125480	GT	TGG
(TGC)	 AG	125623-125824	GT	GCG
(TTC)	 AG	126146-126362	GT	TGG
(GTG)	 AG	126680-126786	CA	AGC
-recovered pasa_asmbl_32903.p1, initial, 124605, 124767
-recovered pasa_asmbl_32903.p1, terminal, 126680, 126786
-recovered pasa_asmbl_32903.p1, internal, 122459, 122497
-recovered pasa_asmbl_32903.p1, internal, 122832, 122938
-recovered pasa_asmbl_32903.p1, internal, 124132, 124195
-recovered pasa_asmbl_32903.p1, internal, 124605, 124767
-recovered pasa_asmbl_32903.p1, internal, 125414, 125480
-recovered pasa_asmbl_32903.p1, internal, 125623, 125824
-recovered pasa_asmbl_32903.p1, internal, 126146, 126362
Valid prediction for GeneMark_model.93924_t
Valid prediction for snap_scaffold_24-snap.1168-T1
Valid prediction for Augustus_model.g36064.t1
Valid prediction for pasa_asmbl_32894.p1
Valid prediction for GeneMark_model.93930_t
Valid prediction for GlimmerHMM_glimmerT_53862-T1
Valid prediction for Augustus_model.g36052.t1
Valid prediction for snap_scaffold_24-snap.1171-T1
Valid prediction for Augustus_model.g36060.t1
Valid prediction for GlimmerHMM_glimmerT_53884-T1
Valid prediction for GlimmerHMM_glimmerT_53873-T1
Valid prediction for GlimmerHMM_glimmerT_53864-T1
Valid prediction for snap_scaffold_24-snap.1181-T1
Valid prediction for GeneMark_model.93933_t
Valid prediction for GeneMark_model.93939_t
Valid prediction for snap_scaffold_24-snap.1189-T1
Valid prediction for GeneMark_model.93913_t
Valid prediction for snap_scaffold_24-snap.1194-T1
Valid prediction for snap_scaffold_24-snap.1188-T1
Valid prediction for HiQ_model.g36053.t1
Valid prediction for pasa_asmbl_32895.p1
Valid prediction for GlimmerHMM_glimmerT_53861-T1
Valid prediction for GeneMark_model.93929_t
Valid prediction for snap_scaffold_24-snap.1191-T1
Valid prediction for GeneMark_model.93915_t
Valid prediction for Augustus_model.g36050.t1
Valid prediction for CodingQuarry_transcript_37249-T1
Valid prediction for snap_scaffold_24-snap.1154-T1
Valid prediction for GeneMark_model.93920_t
Valid prediction for GeneMark_model.93916_t
Valid prediction for Augustus_model.g36058.t1
Valid prediction for GlimmerHMM_glimmerT_53867-T1
Valid prediction for Augustus_model.g36056.t1
Valid prediction for CodingQuarry_transcript_37244-T1
Valid prediction for GeneMark_model.93936_t
Valid prediction for GlimmerHMM_glimmerT_53866-T1
Valid prediction for GeneMark_model.93911_t
Valid prediction for snap_scaffold_24-snap.1161-T1
Valid prediction for snap_scaffold_24-snap.1164-T1
Valid prediction for GlimmerHMM_glimmerT_53870-T1
Valid prediction for HiQ_model.g36054.t1
Valid prediction for snap_scaffold_24-snap.1192-T1
Valid prediction for snap_scaffold_24-snap.1169-T1
Couldn't classify 65629, 65745
Couldn't classify 71351, 71426
Sorry, prediction pasa_asmbl_32909.p1 fails validation.
(TCG)	 AG	65629-65745	GT	AGG
(GGT)	 AG	66598-66741	GT	AGG
(GCT)	 AG	68368-68438	GT	AGG
(GTG)	 AG	69990-70208	GT	AGG
(CTC)	 AG	71351-71426	CA	TGC
-recovered pasa_asmbl_32909.p1, internal, 65629, 65745
-recovered pasa_asmbl_32909.p1, internal, 66598, 66741
-recovered pasa_asmbl_32909.p1, internal, 68368, 68438
-recovered pasa_asmbl_32909.p1, internal, 69990, 70208
Valid prediction for GeneMark_model.93938_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8343, rend_intergenic: 7685  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15778, rend_intergenic: 10317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91358, rend_intergenic: 87666  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105360, rend_intergenic: 101518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155354, rend_intergenic: 152289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 226346
-exon list size: 510


building trellis

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58.2    
58.4    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.8    
60.0    
60.2    
60.4    
60.5    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.9    
62.1    
62.3    
62.5    
62.7    
62.9    
63.1    
63.3    
63.5    
63.7    
63.9    
64.1    
64.3    
64.5    
64.6    
64.8    
65.0    
65.2    
65.4    
65.6    
65.8    
66.0    
66.2    
66.4    
66.6    
66.8    
67.0    
67.2    
67.4    
67.6    
67.8    
68.0    
68.2    
68.4    
68.6    
68.8    
68.9    
69.1    
69.3    
69.5    
69.7    
69.9    
70.1    
70.3    
70.5    
70.7    
70.9    
71.1    
71.3    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.0    
73.2    
73.4    
73.6    
73.8    
74.0    
74.2    
74.4    
74.6    
74.8    
75.0    
75.2    
75.4    
75.6    
75.8    
76.0    
76.2    
76.4    
76.6    
76.8    
77.0    
77.1    
77.3    
77.5    
77.7    
77.9    
78.1    
78.3    
78.5    
78.7    
78.9    
79.1    
79.3    
79.5    
79.7    
79.9    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.8    
83.0    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.5    
85.7    
85.9    
86.1    
86.3    
86.5    
86.7    
86.9    
87.1    
87.3    
87.5    
87.7    
87.9    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.5    
89.6    
89.8    
90.0    
90.2    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
95.9    
96.1    
96.3    
96.5    
96.7    
96.9    
97.1    
97.3    
97.5    
97.7    
97.9    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 22 predictions from path traversal
Error with prediction: snap lend_intergenic: 8343, rend_intergenic: 7685  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15778, rend_intergenic: 10317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91358, rend_intergenic: 87666  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105360, rend_intergenic: 101518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155354, rend_intergenic: 152289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 20 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 198660 - 226346
-exon list size: 18


building trellis

5.0    
10.0    
15.0    
20.0    
25.0    
30.0    
35.0    
40.0    
45.0    
50.0    
55.0    
60.0    
65.0    
70.0    
75.0    
80.0    
85.0    
90.0    
95.0    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 201695 - 226346
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 201695 - 222166
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 201695 - 218670
-exon list size: 8


building trellis

10.0    
20.0    
30.0    
40.0    
50.0    
60.0    
70.0    
80.0    
90.0    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 201695 - 217621
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 206322 - 217621
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 207000 - 217621
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support