-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_3352669-3655128 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_24-snap.783-T1 Valid prediction for GlimmerHMM_glimmerT_53582-T1 Valid prediction for GeneMark_model.93445_t Valid prediction for GeneMark_model.93498_t Valid prediction for snap_scaffold_24-snap.772-T1 Valid prediction for GlimmerHMM_glimmerT_53538-T1 Valid prediction for GeneMark_model.93455_t Valid prediction for pasa_asmbl_32157.p1 Valid prediction for Augustus_model.g35853.t1 Valid prediction for snap_scaffold_24-snap.770-T1 Valid prediction for GlimmerHMM_glimmerT_53576-T1 Valid prediction for GeneMark_model.93436_t Valid prediction for snap_scaffold_24-snap.743-T1 Valid prediction for GeneMark_model.93406_t Valid prediction for GeneMark_model.93518_t Valid prediction for snap_scaffold_24-snap.736-T1 Valid prediction for snap_scaffold_24-snap.797-T1 Valid prediction for snap_scaffold_24-snap.733-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_53547-T1 Valid prediction for GeneMark_model.93400_t Valid prediction for GlimmerHMM_glimmerT_53572-T1 Valid prediction for GlimmerHMM_glimmerT_53552-T1 Valid prediction for snap_scaffold_24-snap.747-T1 Valid prediction for GlimmerHMM_glimmerT_53554-T1 Valid prediction for GeneMark_model.93523_t Valid prediction for GeneMark_model.93494_t Valid prediction for GlimmerHMM_glimmerT_53561-T1 Valid prediction for GeneMark_model.93511_t Valid prediction for snap_scaffold_24-snap.753-T1 Valid prediction for CodingQuarry_transcript_37209-T1 Valid prediction for snap_scaffold_24-snap.791-T1 Valid prediction for GlimmerHMM_glimmerT_53542-T1 Valid prediction for GeneMark_model.93486_t Valid prediction for GeneMark_model.93434_t Valid prediction for snap_scaffold_24-snap.761-T1 Valid prediction for GlimmerHMM_glimmerT_53581-T1 Valid prediction for GlimmerHMM_glimmerT_53567-T1 Valid prediction for GeneMark_model.93490_t Valid prediction for GeneMark_model.93429_t Valid prediction for GlimmerHMM_glimmerT_53562-T1 Valid prediction for GeneMark_model.93421_t Valid prediction for snap_scaffold_24-snap.796-T1 Valid prediction for snap_scaffold_24-snap.764-T1 Valid prediction for GlimmerHMM_glimmerT_53556-T1 Valid prediction for snap_scaffold_24-snap.755-T1 Valid prediction for GeneMark_model.93452_t Valid prediction for GlimmerHMM_glimmerT_53555-T1 Valid prediction for GlimmerHMM_glimmerT_53580-T1 Valid prediction for GeneMark_model.93467_t Valid prediction for GeneMark_model.93521_t Valid prediction for GeneMark_model.93481_t Valid prediction for snap_scaffold_24-snap.757-T1 Valid prediction for GlimmerHMM_glimmerT_53545-T1 Valid prediction for GlimmerHMM_glimmerT_53569-T1 Valid prediction for GlimmerHMM_glimmerT_53575-T1 Valid prediction for GeneMark_model.93475_t Valid prediction for GeneMark_model.93507_t Valid prediction for GeneMark_model.93504_t Valid prediction for GeneMark_model.93447_t Valid prediction for GeneMark_model.93472_t Valid prediction for snap_scaffold_24-snap.735-T1 Valid prediction for snap_scaffold_24-snap.739-T1 Valid prediction for snap_scaffold_24-snap.742-T1 Valid prediction for GeneMark_model.93520_t Valid prediction for GeneMark_model.93502_t Valid prediction for Augustus_model.g35867.t1 Valid prediction for GlimmerHMM_glimmerT_53559-T1 Valid prediction for GeneMark_model.93451_t Valid prediction for GeneMark_model.93431_t Valid prediction for snap_scaffold_24-snap.746-T1 Valid prediction for GeneMark_model.93440_t Valid prediction for snap_scaffold_24-snap.781-T1 Valid prediction for GlimmerHMM_glimmerT_53557-T1 Valid prediction for GeneMark_model.93426_t Valid prediction for snap_scaffold_24-snap.768-T1 Valid prediction for GeneMark_model.93442_t Valid prediction for snap_scaffold_24-snap.759-T1 Valid prediction for GeneMark_model.93424_t Valid prediction for GeneMark_model.93465_t Valid prediction for GeneMark_model.93515_t Valid prediction for GeneMark_model.93453_t Valid prediction for GeneMark_model.93422_t Valid prediction for Augustus_model.g35865.t1 Valid prediction for snap_scaffold_24-snap.773-T1 Valid prediction for snap_scaffold_24-snap.763-T1 Valid prediction for GeneMark_model.93414_t Valid prediction for GeneMark_model.93428_t Valid prediction for snap_scaffold_24-snap.769-T1 Valid prediction for CodingQuarry_transcript_37210-T1 Valid prediction for snap_scaffold_24-snap.741-T1 Sorry, intron length (6) is less than minimum required (10) Valid prediction for snap_scaffold_24-snap.751-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for GeneMark_model.93512_t Valid prediction for snap_scaffold_24-snap.794-T1 Valid prediction for GeneMark_model.93461_t Valid prediction for Augustus_model.g35852.t1 Valid prediction for GeneMark_model.93500_t Valid prediction for Augustus_model.g35866.t1 Valid prediction for GlimmerHMM_glimmerT_53565-T1 Valid prediction for snap_scaffold_24-snap.749-T1 Valid prediction for GeneMark_model.93418_t Valid prediction for snap_scaffold_24-snap.787-T1 Valid prediction for GlimmerHMM_glimmerT_53537-T1 Valid prediction for snap_scaffold_24-snap.750-T1 Valid prediction for snap_scaffold_24-snap.734-T1 Valid prediction for Augustus_model.g35856.t1 Valid prediction for Augustus_model.g35851.t1 Valid prediction for GeneMark_model.93449_t Valid prediction for GeneMark_model.93469_t Valid prediction for snap_scaffold_24-snap.789-T1 Valid prediction for GlimmerHMM_glimmerT_53571-T1 Valid prediction for GlimmerHMM_glimmerT_53579-T1 Valid prediction for GeneMark_model.93432_t Valid prediction for GeneMark_model.93505_t Valid prediction for snap_scaffold_24-snap.786-T1 Valid prediction for GeneMark_model.93470_t Valid prediction for GeneMark_model.93410_t Valid prediction for GeneMark_model.93477_t Valid prediction for GeneMark_model.93456_t Valid prediction for GeneMark_model.93416_t Valid prediction for GeneMark_model.93483_t Valid prediction for GlimmerHMM_glimmerT_53550-T1 Valid prediction for GeneMark_model.93408_t Valid prediction for GeneMark_model.93479_t Valid prediction for snap_scaffold_24-snap.775-T1 Valid prediction for snap_scaffold_24-snap.788-T1 Valid prediction for GeneMark_model.93412_t Valid prediction for snap_scaffold_24-snap.754-T1 Valid prediction for GlimmerHMM_glimmerT_53574-T1 Valid prediction for GeneMark_model.93438_t Valid prediction for GeneMark_model.93476_t Valid prediction for GeneMark_model.93404_t Valid prediction for GeneMark_model.93433_t Valid prediction for GeneMark_model.93509_t Valid prediction for GeneMark_model.93402_t Valid prediction for snap_scaffold_24-snap.792-T1 Valid prediction for HiQ_model.g35847.t1 Valid prediction for GlimmerHMM_glimmerT_53549-T1 Valid prediction for GeneMark_model.93488_t Valid prediction for GeneMark_model.93496_t Valid prediction for GlimmerHMM_glimmerT_53573-T1 Valid prediction for GeneMark_model.93444_t Valid prediction for GeneMark_model.93492_t Valid prediction for GlimmerHMM_glimmerT_53534-T1 Valid prediction for GeneMark_model.93514_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_53540-T1 Valid prediction for pasa_asmbl_32814.p1 Valid prediction for HiQ_model.g35848.t1 Valid prediction for snap_scaffold_24-snap.758-T1 Valid prediction for CodingQuarry_transcript_37208-T1 Valid prediction for GlimmerHMM_glimmerT_53570-T1 Valid prediction for GeneMark_model.93415_t Valid prediction for GlimmerHMM_glimmerT_53553-T1 Valid prediction for HiQ_model.g35846.t1 Valid prediction for GeneMark_model.93420_t Valid prediction for GlimmerHMM_glimmerT_53535-T1 Valid prediction for snap_scaffold_24-snap.766-T1 Valid prediction for snap_scaffold_24-snap.779-T1 Valid prediction for GlimmerHMM_glimmerT_53533-T1 Valid prediction for GlimmerHMM_glimmerT_53568-T1 Valid prediction for snap_scaffold_24-snap.777-T1 Sorry, intron length (3) is less than minimum required (10) Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_24-snap.771-T1 Valid prediction for snap_scaffold_24-snap.790-T1 Valid prediction for GeneMark_model.93473_t Valid prediction for GeneMark_model.93519_t Valid prediction for GeneMark_model.93466_t Valid prediction for Augustus_model.g35868.t1 Valid prediction for GeneMark_model.93437_t Valid prediction for GlimmerHMM_glimmerT_53544-T1 Valid prediction for GlimmerHMM_glimmerT_53546-T1 Valid prediction for snap_scaffold_24-snap.732-T1 Valid prediction for GeneMark_model.93489_t Valid prediction for snap_scaffold_24-snap.748-T1 Valid prediction for GeneMark_model.93484_t Valid prediction for Augustus_model.g35861.t1 Valid prediction for snap_scaffold_24-snap.774-T1 Valid prediction for GlimmerHMM_glimmerT_53536-T1 Valid prediction for GeneMark_model.93501_t Valid prediction for GlimmerHMM_glimmerT_53560-T1 Valid prediction for GeneMark_model.93497_t Valid prediction for GeneMark_model.93443_t Valid prediction for snap_scaffold_24-snap.762-T1 Valid prediction for Augustus_model.g35859.t1 Valid prediction for GeneMark_model.93413_t Valid prediction for Augustus_model.g35863.t1 Valid prediction for GeneMark_model.93457_t Valid prediction for GeneMark_model.93513_t Valid prediction for GlimmerHMM_glimmerT_53563-T1 Valid prediction for snap_scaffold_24-snap.752-T1 Valid prediction for Augustus_model.g35860.t1 Valid prediction for GlimmerHMM_glimmerT_53566-T1 Valid prediction for GeneMark_model.93468_t Valid prediction for GeneMark_model.93462_t Valid prediction for GeneMark_model.93403_t Valid prediction for GlimmerHMM_glimmerT_53539-T1 Valid prediction for GeneMark_model.93419_t Valid prediction for Augustus_model.g35850.t1 Valid prediction for snap_scaffold_24-snap.767-T1 Valid prediction for GeneMark_model.93463_t Valid prediction for Augustus_model.g35849.t1 Valid prediction for GeneMark_model.93493_t Valid prediction for Augustus_model.g35854.t1 Valid prediction for snap_scaffold_24-snap.784-T1 Valid prediction for GeneMark_model.93409_t Valid prediction for GlimmerHMM_glimmerT_53541-T1 Valid prediction for GeneMark_model.93459_t Valid prediction for snap_scaffold_24-snap.780-T1 Couldn't classify 200355, 200382 Couldn't classify 201557, 201688 Sorry, prediction pasa_asmbl_32823.p1 fails validation. (ACC) AC 200355-200382 GT ATG (CCA) AG 200793-200953 GT AGG (CAA) AG 201557-201688 TG TGT -recovered pasa_asmbl_32823.p1, internal, 200793, 200953 Valid prediction for GeneMark_model.93430_t Valid prediction for snap_scaffold_24-snap.785-T1 Valid prediction for GeneMark_model.93427_t Valid prediction for snap_scaffold_24-snap.744-T1 Valid prediction for GeneMark_model.93478_t Valid prediction for GeneMark_model.93458_t Valid prediction for Augustus_model.g35857.t1 Valid prediction for GeneMark_model.93522_t Valid prediction for GeneMark_model.93464_t Valid prediction for snap_scaffold_24-snap.756-T1 Valid prediction for GeneMark_model.93411_t Valid prediction for snap_scaffold_24-snap.778-T1 Valid prediction for GlimmerHMM_glimmerT_53564-T1 Valid prediction for GeneMark_model.93439_t Valid prediction for GlimmerHMM_glimmerT_53548-T1 Valid prediction for GeneMark_model.93482_t Valid prediction for GeneMark_model.93495_t Valid prediction for snap_scaffold_24-snap.793-T1 Valid prediction for GeneMark_model.93448_t Valid prediction for GeneMark_model.93446_t Valid prediction for snap_scaffold_24-snap.760-T1 Valid prediction for GlimmerHMM_glimmerT_53551-T1 Valid prediction for GeneMark_model.93508_t Valid prediction for Augustus_model.g35845.t1 Valid prediction for GeneMark_model.93480_t Valid prediction for GeneMark_model.93417_t Couldn't classify 206455, 206653 Sorry, prediction pasa_asmbl_32821.p1 fails validation. (TTC) GG 206455-206653 GT AGG (CCA) AG 206990-207111 GT AGG (ATG) AG 207314-207445 GT AGG (TTG) AG 209068-209203 GT CGG (GTC) AG 210243-210265 GT AGG (GGA) AG 211858-211929 GT AGG (TAC) AG 212270-212378 GT AGG (ACA) AG 212834-212908 GT AGG (ACT) AG 213068-213211 GT GGG (ATC) AG 213508-213602 GT AGG (ATC) AG 215038-215130 GT AGG (CTA) AG 215656-215787 GT AGG (GTG) AG 216495-216571 GT TGG (GAA) AG 216681-216871 GT CGG (GCA) AG 218355-219532 CT AAC -recovered pasa_asmbl_32821.p1, initial, 207314, 207445 -recovered pasa_asmbl_32821.p1, terminal, 218355, 219532 -recovered pasa_asmbl_32821.p1, internal, 206990, 207111 -recovered pasa_asmbl_32821.p1, internal, 207314, 207445 -recovered pasa_asmbl_32821.p1, internal, 209068, 209203 -recovered pasa_asmbl_32821.p1, internal, 210243, 210265 -recovered pasa_asmbl_32821.p1, internal, 211858, 211929 -recovered pasa_asmbl_32821.p1, internal, 212270, 212378 -recovered pasa_asmbl_32821.p1, internal, 212834, 212908 -recovered pasa_asmbl_32821.p1, internal, 213068, 213211 -recovered pasa_asmbl_32821.p1, internal, 213508, 213602 -recovered pasa_asmbl_32821.p1, internal, 215038, 215130 -recovered pasa_asmbl_32821.p1, internal, 215656, 215787 -recovered pasa_asmbl_32821.p1, internal, 216495, 216571 -recovered pasa_asmbl_32821.p1, internal, 216681, 216871 Valid prediction for GeneMark_model.93454_t Valid prediction for GeneMark_model.93471_t Valid prediction for GeneMark_model.93506_t Valid prediction for GlimmerHMM_glimmerT_53543-T1 Valid prediction for GeneMark_model.93474_t Valid prediction for GeneMark_model.93425_t Valid prediction for snap_scaffold_24-snap.737-T1 Valid prediction for snap_scaffold_24-snap.776-T1 Valid prediction for GlimmerHMM_glimmerT_53577-T1 Valid prediction for snap_scaffold_24-snap.740-T1 Valid prediction for GlimmerHMM_glimmerT_53558-T1 Valid prediction for snap_scaffold_24-snap.765-T1 Valid prediction for GeneMark_model.93510_t Couldn't classify 252220, 252300 Sorry, prediction pasa_asmbl_33290.p1 fails validation. (CCT) CT 252220-252300 GT AGG (CCT) AG 252476-252556 GT TGG (ATG) AG 252781-252945 GT AGG (GCG) AG 253510-253647 GT CGG (GTT) AG 253990-254180 GT CAG (GCA) AG 254467-254585 GT GAG (GGA) AG 254816-254902 GT AGG (TTG) AG 255021-255122 GT AAG (ACA) AG 255207-255370 GT AGG (TGT) AG 255746-255934 GT AGG (GGC) AG 256091-256228 GT AGG (CTC) AG 256371-256636 GT AGG (GAT) AG 256998-257229 GT AGG (AGC) AG 257504-257609 GT CGG (GCA) AG 258331-258851 AC AAA -recovered pasa_asmbl_33290.p1, initial, 252781, 252945 -recovered pasa_asmbl_33290.p1, terminal, 258331, 258851 -recovered pasa_asmbl_33290.p1, internal, 252476, 252556 -recovered pasa_asmbl_33290.p1, internal, 252781, 252945 -recovered pasa_asmbl_33290.p1, internal, 253510, 253647 -recovered pasa_asmbl_33290.p1, internal, 253990, 254180 -recovered pasa_asmbl_33290.p1, internal, 254467, 254585 -recovered pasa_asmbl_33290.p1, internal, 254816, 254902 -recovered pasa_asmbl_33290.p1, internal, 255021, 255122 -recovered pasa_asmbl_33290.p1, internal, 255207, 255370 -recovered pasa_asmbl_33290.p1, internal, 255746, 255934 -recovered pasa_asmbl_33290.p1, internal, 256091, 256228 -recovered pasa_asmbl_33290.p1, internal, 256371, 256636 -recovered pasa_asmbl_33290.p1, internal, 256998, 257229 -recovered pasa_asmbl_33290.p1, internal, 257504, 257609 Valid prediction for GlimmerHMM_glimmerT_53578-T1 Valid prediction for snap_scaffold_24-snap.782-T1 Valid prediction for snap_scaffold_24-snap.738-T1 Valid prediction for GeneMark_model.93401_t Valid prediction for GeneMark_model.93491_t Valid prediction for snap_scaffold_24-snap.745-T1 Valid prediction for Augustus_model.g35864.t1 Valid prediction for GeneMark_model.93405_t Valid prediction for GeneMark_model.93450_t Valid prediction for GeneMark_model.93503_t Valid prediction for Augustus_model.g35855.t1 Valid prediction for Augustus_model.g35858.t1 Valid prediction for GeneMark_model.93516_t Valid prediction for GeneMark_model.93517_t Valid prediction for snap_scaffold_24-snap.795-T1 Valid prediction for GeneMark_model.93423_t Valid prediction for GeneMark_model.93499_t Valid prediction for GeneMark_model.93460_t Valid prediction for GeneMark_model.93407_t Valid prediction for Augustus_model.g35862.t1 Valid prediction for GeneMark_model.93485_t Couldn't classify 245778, 245994 Couldn't classify 251280, 251308 Sorry, prediction pasa_asmbl_32815.p1 fails validation. (CCC) GG 245778-245994 GT GGG (ACA) AG 248515-248658 GT AGG (GAT) AG 248868-248952 GT AAG (TGT) AG 250130-250202 GT GGG (TCT) AG 250722-250791 GT GGG (CCA) AG 250900-251034 GT AGG (AGA) AG 251280-251308 CT GAC add_exon() Sorry, pasa_asmbl_32815.p1 250900-251034-terminal-1 is invalid. -recovered pasa_asmbl_32815.p1, terminal, 250900, 251034 -recovered pasa_asmbl_32815.p1, internal, 248515, 248658 -recovered pasa_asmbl_32815.p1, internal, 248868, 248952 -recovered pasa_asmbl_32815.p1, internal, 250130, 250202 -recovered pasa_asmbl_32815.p1, internal, 250722, 250791 -recovered pasa_asmbl_32815.p1, internal, 250900, 251034 Valid prediction for GeneMark_model.93441_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 31507, rend_intergenic: 4867 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 58190, rend_intergenic: 44253 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73686, rend_intergenic: 64579 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102692, rend_intergenic: 82999 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121961, rend_intergenic: 103360 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125698, rend_intergenic: 122597 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 129850, rend_intergenic: 127808 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132060, rend_intergenic: 130258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153868, rend_intergenic: 145699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186694, rend_intergenic: 167391 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 191929, rend_intergenic: 190661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197435, rend_intergenic: 192015 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200821, rend_intergenic: 198070 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203764, rend_intergenic: 202216 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222307, rend_intergenic: 203846 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 238796, rend_intergenic: 232388 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241190, rend_intergenic: 238861 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242194, rend_intergenic: 241466 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252824, rend_intergenic: 242724 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270862, rend_intergenic: 253196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 273664, rend_intergenic: 271075 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276792, rend_intergenic: 274385 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 283271, rend_intergenic: 281641 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 286701, rend_intergenic: 284576 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 292592, rend_intergenic: 287005 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 302460 -exon list size: 1670 building trellis 0.1 0.1 0.2 0.2 0.3 0.4 0.4 0.5 0.5 0.6 0.7 0.7 0.8 0.8 0.9 1.0 1.0 1.1 1.1 1.2 1.3 1.3 1.4 1.4 1.5 1.6 1.6 1.7 1.7 1.8 1.9 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.3 2.4 2.5 2.5 2.6 2.6 2.7 2.8 2.8 2.9 2.9 3.0 3.1 3.1 3.2 3.2 3.3 3.3 3.4 3.5 3.5 3.6 3.6 3.7 3.8 3.8 3.9 3.9 4.0 4.1 4.1 4.2 4.2 4.3 4.4 4.4 4.5 4.5 4.6 4.7 4.7 4.8 4.8 4.9 5.0 5.0 5.1 5.1 5.2 5.3 5.3 5.4 5.4 5.5 5.6 5.6 5.7 5.7 5.8 5.9 5.9 6.0 6.0 6.1 6.2 6.2 6.3 6.3 6.4 6.5 6.5 6.6 6.6 6.7 6.8 6.8 6.9 6.9 7.0 7.1 7.1 7.2 7.2 7.3 7.4 7.4 7.5 7.5 7.6 7.7 7.7 7.8 7.8 7.9 8.0 8.0 8.1 8.1 8.2 8.3 8.3 8.4 8.4 8.5 8.6 8.6 8.7 8.7 8.8 8.9 8.9 9.0 9.0 9.1 9.2 9.2 9.3 9.3 9.4 9.4 9.5 9.6 9.6 9.7 9.7 9.8 9.9 9.9 10.0 10.0 10.1 10.2 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.6 10.7 10.8 10.8 10.9 10.9 11.0 11.1 11.1 11.2 11.2 11.3 11.4 11.4 11.5 11.5 11.6 11.7 11.7 11.8 11.8 11.9 12.0 12.0 12.1 12.1 12.2 12.3 12.3 12.4 12.4 12.5 12.6 12.6 12.7 12.7 12.8 12.9 12.9 13.0 13.0 13.1 13.2 13.2 13.3 13.3 13.4 13.5 13.5 13.6 13.6 13.7 13.8 13.8 13.9 13.9 14.0 14.1 14.1 14.2 14.2 14.3 14.4 14.4 14.5 14.5 14.6 14.7 14.7 14.8 14.8 14.9 15.0 15.0 15.1 15.1 15.2 15.3 15.3 15.4 15.4 15.5 15.6 15.6 15.7 15.7 15.8 15.8 15.9 16.0 16.0 16.1 16.1 16.2 16.3 16.3 16.4 16.4 16.5 16.6 16.6 16.7 16.7 16.8 16.9 16.9 17.0 17.0 17.1 17.2 17.2 17.3 17.3 17.4 17.5 17.5 17.6 17.6 17.7 17.8 17.8 17.9 17.9 18.0 18.1 18.1 18.2 18.2 18.3 18.4 18.4 18.5 18.5 18.6 18.7 18.7 18.8 18.8 18.9 19.0 19.0 19.1 19.1 19.2 19.3 19.3 19.4 19.4 19.5 19.6 19.6 19.7 19.7 19.8 19.9 19.9 20.0 20.0 20.1 20.2 20.2 20.3 20.3 20.4 20.5 20.5 20.6 20.6 20.7 20.8 20.8 20.9 20.9 21.0 21.1 21.1 21.2 21.2 21.3 21.4 21.4 21.5 21.5 21.6 21.7 21.7 21.8 21.8 21.9 21.9 22.0 22.1 22.1 22.2 22.2 22.3 22.4 22.4 22.5 22.5 22.6 22.7 22.7 22.8 22.8 22.9 23.0 23.0 23.1 23.1 23.2 23.3 23.3 23.4 23.4 23.5 23.6 23.6 23.7 23.7 23.8 23.9 23.9 24.0 24.0 24.1 24.2 24.2 24.3 24.3 24.4 24.5 24.5 24.6 24.6 24.7 24.8 24.8 24.9 24.9 25.0 25.1 25.1 25.2 25.2 25.3 25.4 25.4 25.5 25.5 25.6 25.7 25.7 25.8 25.8 25.9 26.0 26.0 26.1 26.1 26.2 26.3 26.3 26.4 26.4 26.5 26.6 26.6 26.7 26.7 26.8 26.9 26.9 27.0 27.0 27.1 27.2 27.2 27.3 27.3 27.4 27.5 27.5 27.6 27.6 27.7 27.8 27.8 27.9 27.9 28.0 28.1 28.1 28.2 28.2 28.3 28.3 28.4 28.5 28.5 28.6 28.6 28.7 28.8 28.8 28.9 28.9 29.0 29.1 29.1 29.2 29.2 29.3 29.4 29.4 29.5 29.5 29.6 29.7 29.7 29.8 29.8 29.9 30.0 30.0 30.1 30.1 30.2 30.3 30.3 30.4 30.4 30.5 30.6 30.6 30.7 30.7 30.8 30.9 30.9 31.0 31.0 31.1 31.2 31.2 31.3 31.3 31.4 31.5 31.5 31.6 31.6 31.7 31.8 31.8 31.9 31.9 32.0 32.1 32.1 32.2 32.2 32.3 32.4 32.4 32.5 32.5 32.6 32.7 32.7 32.8 32.8 32.9 33.0 33.0 33.1 33.1 33.2 33.3 33.3 33.4 33.4 33.5 33.6 33.6 33.7 33.7 33.8 33.9 33.9 34.0 34.0 34.1 34.2 34.2 34.3 34.3 34.4 34.4 34.5 34.6 34.6 34.7 34.7 34.8 34.9 34.9 35.0 35.0 35.1 35.2 35.2 35.3 35.3 35.4 35.5 35.5 35.6 35.6 35.7 35.8 35.8 35.9 35.9 36.0 36.1 36.1 36.2 36.2 36.3 36.4 36.4 36.5 36.5 36.6 36.7 36.7 36.8 36.8 36.9 37.0 37.0 37.1 37.1 37.2 37.3 37.3 37.4 37.4 37.5 37.6 37.6 37.7 37.7 37.8 37.9 37.9 38.0 38.0 38.1 38.2 38.2 38.3 38.3 38.4 38.5 38.5 38.6 38.6 38.7 38.8 38.8 38.9 38.9 39.0 39.1 39.1 39.2 39.2 39.3 39.4 39.4 39.5 39.5 39.6 39.7 39.7 39.8 39.8 39.9 40.0 40.0 40.1 40.1 40.2 40.3 40.3 40.4 40.4 40.5 40.6 40.6 40.7 40.7 40.8 40.8 40.9 41.0 41.0 41.1 41.1 41.2 41.3 41.3 41.4 41.4 41.5 41.6 41.6 41.7 41.7 41.8 41.9 41.9 42.0 42.0 42.1 42.2 42.2 42.3 42.3 42.4 42.5 42.5 42.6 42.6 42.7 42.8 42.8 42.9 42.9 43.0 43.1 43.1 43.2 43.2 43.3 43.4 43.4 43.5 43.5 43.6 43.7 43.7 43.8 43.8 43.9 44.0 44.0 44.1 44.1 44.2 44.3 44.3 44.4 44.4 44.5 44.6 44.6 44.7 44.7 44.8 44.9 44.9 45.0 45.0 45.1 45.2 45.2 45.3 45.3 45.4 45.5 45.5 45.6 45.6 45.7 45.8 45.8 45.9 45.9 46.0 46.1 46.1 46.2 46.2 46.3 46.4 46.4 46.5 46.5 46.6 46.7 46.7 46.8 46.8 46.9 46.9 47.0 47.1 47.1 47.2 47.2 47.3 47.4 47.4 47.5 47.5 47.6 47.7 47.7 47.8 47.8 47.9 48.0 48.0 48.1 48.1 48.2 48.3 48.3 48.4 48.4 48.5 48.6 48.6 48.7 48.7 48.8 48.9 48.9 49.0 49.0 49.1 49.2 49.2 49.3 49.3 49.4 49.5 49.5 49.6 49.6 49.7 49.8 49.8 49.9 49.9 50.0 50.1 50.1 50.2 50.2 50.3 50.4 50.4 50.5 50.5 50.6 50.7 50.7 50.8 50.8 50.9 51.0 51.0 51.1 51.1 51.2 51.3 51.3 51.4 51.4 51.5 51.6 51.6 51.7 51.7 51.8 51.9 51.9 52.0 52.0 52.1 52.2 52.2 52.3 52.3 52.4 52.5 52.5 52.6 52.6 52.7 52.8 52.8 52.9 52.9 53.0 53.1 53.1 53.2 53.2 53.3 53.3 53.4 53.5 53.5 53.6 53.6 53.7 53.8 53.8 53.9 53.9 54.0 54.1 54.1 54.2 54.2 54.3 54.4 54.4 54.5 54.5 54.6 54.7 54.7 54.8 54.8 54.9 55.0 55.0 55.1 55.1 55.2 55.3 55.3 55.4 55.4 55.5 55.6 55.6 55.7 55.7 55.8 55.9 55.9 56.0 56.0 56.1 56.2 56.2 56.3 56.3 56.4 56.5 56.5 56.6 56.6 56.7 56.8 56.8 56.9 56.9 57.0 57.1 57.1 57.2 57.2 57.3 57.4 57.4 57.5 57.5 57.6 57.7 57.7 57.8 57.8 57.9 58.0 58.0 58.1 58.1 58.2 58.3 58.3 58.4 58.4 58.5 58.6 58.6 58.7 58.7 58.8 58.9 58.9 59.0 59.0 59.1 59.2 59.2 59.3 59.3 59.4 59.4 59.5 59.6 59.6 59.7 59.7 59.8 59.9 59.9 60.0 60.0 60.1 60.2 60.2 60.3 60.3 60.4 60.5 60.5 60.6 60.6 60.7 60.8 60.8 60.9 60.9 61.0 61.1 61.1 61.2 61.2 61.3 61.4 61.4 61.5 61.5 61.6 61.7 61.7 61.8 61.8 61.9 62.0 62.0 62.1 62.1 62.2 62.3 62.3 62.4 62.4 62.5 62.6 62.6 62.7 62.7 62.8 62.9 62.9 63.0 63.0 63.1 63.2 63.2 63.3 63.3 63.4 63.5 63.5 63.6 63.6 63.7 63.8 63.8 63.9 63.9 64.0 64.1 64.1 64.2 64.2 64.3 64.4 64.4 64.5 64.5 64.6 64.7 64.7 64.8 64.8 64.9 65.0 65.0 65.1 65.1 65.2 65.3 65.3 65.4 65.4 65.5 65.6 65.6 65.7 65.7 65.8 65.8 65.9 66.0 66.0 66.1 66.1 66.2 66.3 66.3 66.4 66.4 66.5 66.6 66.6 66.7 66.7 66.8 66.9 66.9 67.0 67.0 67.1 67.2 67.2 67.3 67.3 67.4 67.5 67.5 67.6 67.6 67.7 67.8 67.8 67.9 67.9 68.0 68.1 68.1 68.2 68.2 68.3 68.4 68.4 68.5 68.5 68.6 68.7 68.7 68.8 68.8 68.9 69.0 69.0 69.1 69.1 69.2 69.3 69.3 69.4 69.4 69.5 69.6 69.6 69.7 69.7 69.8 69.9 69.9 70.0 70.0 70.1 70.2 70.2 70.3 70.3 70.4 70.5 70.5 70.6 70.6 70.7 70.8 70.8 70.9 70.9 71.0 71.1 71.1 71.2 71.2 71.3 71.4 71.4 71.5 71.5 71.6 71.7 71.7 71.8 71.8 71.9 71.9 72.0 72.1 72.1 72.2 72.2 72.3 72.4 72.4 72.5 72.5 72.6 72.7 72.7 72.8 72.8 72.9 73.0 73.0 73.1 73.1 73.2 73.3 73.3 73.4 73.4 73.5 73.6 73.6 73.7 73.7 73.8 73.9 73.9 74.0 74.0 74.1 74.2 74.2 74.3 74.3 74.4 74.5 74.5 74.6 74.6 74.7 74.8 74.8 74.9 74.9 75.0 75.1 75.1 75.2 75.2 75.3 75.4 75.4 75.5 75.5 75.6 75.7 75.7 75.8 75.8 75.9 76.0 76.0 76.1 76.1 76.2 76.3 76.3 76.4 76.4 76.5 76.6 76.6 76.7 76.7 76.8 76.9 76.9 77.0 77.0 77.1 77.2 77.2 77.3 77.3 77.4 77.5 77.5 77.6 77.6 77.7 77.8 77.8 77.9 77.9 78.0 78.1 78.1 78.2 78.2 78.3 78.3 78.4 78.5 78.5 78.6 78.6 78.7 78.8 78.8 78.9 78.9 79.0 79.1 79.1 79.2 79.2 79.3 79.4 79.4 79.5 79.5 79.6 79.7 79.7 79.8 79.8 79.9 80.0 80.0 80.1 80.1 80.2 80.3 80.3 80.4 80.4 80.5 80.6 80.6 80.7 80.7 80.8 80.9 80.9 81.0 81.0 81.1 81.2 81.2 81.3 81.3 81.4 81.5 81.5 81.6 81.6 81.7 81.8 81.8 81.9 81.9 82.0 82.1 82.1 82.2 82.2 82.3 82.4 82.4 82.5 82.5 82.6 82.7 82.7 82.8 82.8 82.9 83.0 83.0 83.1 83.1 83.2 83.3 83.3 83.4 83.4 83.5 83.6 83.6 83.7 83.7 83.8 83.9 83.9 84.0 84.0 84.1 84.2 84.2 84.3 84.3 84.4 84.4 84.5 84.6 84.6 84.7 84.7 84.8 84.9 84.9 85.0 85.0 85.1 85.2 85.2 85.3 85.3 85.4 85.5 85.5 85.6 85.6 85.7 85.8 85.8 85.9 85.9 86.0 86.1 86.1 86.2 86.2 86.3 86.4 86.4 86.5 86.5 86.6 86.7 86.7 86.8 86.8 86.9 87.0 87.0 87.1 87.1 87.2 87.3 87.3 87.4 87.4 87.5 87.6 87.6 87.7 87.7 87.8 87.9 87.9 88.0 88.0 88.1 88.2 88.2 88.3 88.3 88.4 88.5 88.5 88.6 88.6 88.7 88.8 88.8 88.9 88.9 89.0 89.1 89.1 89.2 89.2 89.3 89.4 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.8 89.9 90.0 90.0 90.1 90.1 90.2 90.3 90.3 90.4 90.4 90.5 90.6 90.6 90.7 90.7 90.8 90.8 90.9 91.0 91.0 91.1 91.1 91.2 91.3 91.3 91.4 91.4 91.5 91.6 91.6 91.7 91.7 91.8 91.9 91.9 92.0 92.0 92.1 92.2 92.2 92.3 92.3 92.4 92.5 92.5 92.6 92.6 92.7 92.8 92.8 92.9 92.9 93.0 93.1 93.1 93.2 93.2 93.3 93.4 93.4 93.5 93.5 93.6 93.7 93.7 93.8 93.8 93.9 94.0 94.0 94.1 94.1 94.2 94.3 94.3 94.4 94.4 94.5 94.6 94.6 94.7 94.7 94.8 94.9 94.9 95.0 95.0 95.1 95.2 95.2 95.3 95.3 95.4 95.5 95.5 95.6 95.6 95.7 95.8 95.8 95.9 95.9 96.0 96.1 96.1 96.2 96.2 96.3 96.4 96.4 96.5 96.5 96.6 96.7 96.7 96.8 96.8 96.9 96.9 97.0 97.1 97.1 97.2 97.2 97.3 97.4 97.4 97.5 97.5 97.6 97.7 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.1 98.2 98.3 98.3 98.4 98.4 98.5 98.6 98.6 98.7 98.7 98.8 98.9 98.9 99.0 99.0 99.1 99.2 99.2 99.3 99.3 99.4 99.5 99.5 99.6 99.6 99.7 99.8 99.8 99.9 99.9 -found 58 predictions from path traversal Error with prediction: snap lend_intergenic: 31507, rend_intergenic: 4867 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 58190, rend_intergenic: 44253 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73686, rend_intergenic: 64579 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102692, rend_intergenic: 82999 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121961, rend_intergenic: 103360 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125698, rend_intergenic: 122597 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 129850, rend_intergenic: 127808 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132060, rend_intergenic: 130258 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153868, rend_intergenic: 145699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186694, rend_intergenic: 167391 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 191929, rend_intergenic: 190661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197435, rend_intergenic: 192015 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200821, rend_intergenic: 198070 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203764, rend_intergenic: 202216 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222307, rend_intergenic: 203846 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 238796, rend_intergenic: 232388 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241190, rend_intergenic: 238861 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242194, rend_intergenic: 241466 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252824, rend_intergenic: 242724 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270862, rend_intergenic: 253196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 273664, rend_intergenic: 271075 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276792, rend_intergenic: 274385 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 283271, rend_intergenic: 281641 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 286701, rend_intergenic: 284576 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 292592, rend_intergenic: 287005 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 27 predictions persist after filtering for low support