-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_2532971-2785686

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.93117_t
Valid prediction for GeneMark_model.93168_t
Valid prediction for CodingQuarry_transcript_37189-T1
Valid prediction for snap_scaffold_24-snap.600-T1
Valid prediction for Augustus_model.g35789.t1
Valid prediction for snap_scaffold_24-snap.605-T1
Valid prediction for GlimmerHMM_glimmerT_53453-T1
Valid prediction for snap_scaffold_24-snap.603-T1
Valid prediction for snap_scaffold_24-snap.578-T1
Valid prediction for GeneMark_model.93177_t
Valid prediction for GeneMark_model.93129_t
Valid prediction for GlimmerHMM_glimmerT_53431-T1
Valid prediction for snap_scaffold_24-snap.609-T1
Valid prediction for GeneMark_model.93141_t
Valid prediction for GeneMark_model.93175_t
Valid prediction for GeneMark_model.93112_t
Valid prediction for snap_scaffold_24-snap.598-T1
Valid prediction for GlimmerHMM_glimmerT_53452-T1
Valid prediction for GlimmerHMM_glimmerT_53458-T1
Valid prediction for snap_scaffold_24-snap.595-T1
Valid prediction for GeneMark_model.93115_t
Valid prediction for GeneMark_model.93133_t
Couldn't classify 203870, 204038
Sorry, prediction pasa_asmbl_32116.p1 fails validation.
(GTG)	 CA	203870-204038	GT	AGG
(CTG)	 AG	204507-204615	GT	AGG
(CCC)	 AG	205607-205728	GT	AGG
(GGC)	 AG	205952-206059	GT	CGG
(GCT)	 AG	207422-207570	GA	GAG
-recovered pasa_asmbl_32116.p1, terminal, 207422, 207570
-recovered pasa_asmbl_32116.p1, internal, 204507, 204615
-recovered pasa_asmbl_32116.p1, internal, 205607, 205728
-recovered pasa_asmbl_32116.p1, internal, 205952, 206059
Valid prediction for GeneMark_model.93165_t
Valid prediction for GlimmerHMM_glimmerT_53435-T1
Valid prediction for GeneMark_model.93088_t
Valid prediction for snap_scaffold_24-snap.575-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_24-snap.593-T1
Valid prediction for GlimmerHMM_glimmerT_53442-T1
Valid prediction for GeneMark_model.93151_t
Valid prediction for snap_scaffold_24-snap.625-T1
Valid prediction for snap_scaffold_24-snap.601-T1
Valid prediction for GeneMark_model.93111_t
Valid prediction for snap_scaffold_24-snap.589-T1
Valid prediction for CodingQuarry_transcript_37190-T1
Valid prediction for snap_scaffold_24-snap.619-T1
Valid prediction for GlimmerHMM_glimmerT_53460-T1
Valid prediction for CodingQuarry_transcript_37188-T1
Valid prediction for GeneMark_model.93179_t
Valid prediction for Augustus_model.g35803.t1
Valid prediction for GeneMark_model.93093_t
Valid prediction for snap_scaffold_24-snap.573-T1
Valid prediction for GeneMark_model.93135_t
Valid prediction for GeneMark_model.93170_t
Valid prediction for GeneMark_model.93152_t
Valid prediction for GlimmerHMM_glimmerT_53441-T1
Valid prediction for snap_scaffold_24-snap.581-T1
Valid prediction for snap_scaffold_24-snap.606-T1
Valid prediction for snap_scaffold_24-snap.613-T1
Valid prediction for GeneMark_model.93127_t
Valid prediction for GeneMark_model.93188_t
Valid prediction for snap_scaffold_24-snap.608-T1
Valid prediction for GeneMark_model.93186_t
Valid prediction for GeneMark_model.93162_t
Valid prediction for snap_scaffold_24-snap.622-T1
Valid prediction for snap_scaffold_24-snap.577-T1
Valid prediction for GlimmerHMM_glimmerT_53456-T1
Valid prediction for GlimmerHMM_glimmerT_53459-T1
Valid prediction for Augustus_model.g35802.t1
Valid prediction for GeneMark_model.93156_t
Valid prediction for GeneMark_model.93100_t
Valid prediction for snap_scaffold_24-snap.596-T1
Valid prediction for GeneMark_model.93119_t
Valid prediction for Augustus_model.g35790.t1
Valid prediction for GeneMark_model.93146_t
Valid prediction for CodingQuarry_transcript_37192-T1
Valid prediction for GeneMark_model.93114_t
Valid prediction for GeneMark_model.93171_t
Valid prediction for snap_scaffold_24-snap.615-T1
Valid prediction for HiQ_model.g35799.t1
Valid prediction for GlimmerHMM_glimmerT_53445-T1
Valid prediction for GlimmerHMM_glimmerT_53457-T1
Valid prediction for GeneMark_model.93136_t
Valid prediction for GeneMark_model.93164_t
Valid prediction for pasa_asmbl_32115.p1
Valid prediction for GeneMark_model.93183_t
Valid prediction for GlimmerHMM_glimmerT_53440-T1
Valid prediction for GeneMark_model.93144_t
Valid prediction for GlimmerHMM_glimmerT_53432-T1
Valid prediction for GlimmerHMM_glimmerT_53447-T1
Valid prediction for GlimmerHMM_glimmerT_53444-T1
Valid prediction for GeneMark_model.93109_t
Valid prediction for Augustus_model.g35796.t1
Valid prediction for GeneMark_model.93103_t
Valid prediction for GeneMark_model.93138_t
Valid prediction for GeneMark_model.93148_t
Valid prediction for GeneMark_model.93131_t
Valid prediction for GlimmerHMM_glimmerT_53446-T1
Valid prediction for GeneMark_model.93106_t
Valid prediction for GeneMark_model.93095_t
Valid prediction for GeneMark_model.93092_t
Valid prediction for HiQ_model.g35800.t1
Valid prediction for GeneMark_model.93160_t
Valid prediction for GeneMark_model.93184_t
Valid prediction for GeneMark_model.93154_t
Valid prediction for GeneMark_model.93098_t
Valid prediction for GeneMark_model.93123_t
Valid prediction for Augustus_model.g35804.t1
Valid prediction for GeneMark_model.93189_t
Valid prediction for snap_scaffold_24-snap.628-T1
Valid prediction for GeneMark_model.93173_t
Valid prediction for GeneMark_model.93149_t
Valid prediction for GlimmerHMM_glimmerT_53437-T1
Valid prediction for GlimmerHMM_glimmerT_53448-T1
Valid prediction for GlimmerHMM_glimmerT_53455-T1
Valid prediction for snap_scaffold_24-snap.585-T1
Valid prediction for snap_scaffold_24-snap.611-T1
Valid prediction for snap_scaffold_24-snap.582-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.93132_t
Valid prediction for snap_scaffold_24-snap.584-T1
Valid prediction for snap_scaffold_24-snap.580-T1
Valid prediction for GeneMark_model.93089_t
Valid prediction for GlimmerHMM_glimmerT_53443-T1
Valid prediction for GeneMark_model.93128_t
Valid prediction for snap_scaffold_24-snap.618-T1
Valid prediction for GeneMark_model.93159_t
Valid prediction for GlimmerHMM_glimmerT_53454-T1
Valid prediction for snap_scaffold_24-snap.602-T1
Valid prediction for GeneMark_model.93107_t
Valid prediction for snap_scaffold_24-snap.591-T1
Valid prediction for GlimmerHMM_glimmerT_53430-T1
Valid prediction for Augustus_model.g35795.t1
Valid prediction for GeneMark_model.93169_t
Valid prediction for GeneMark_model.93153_t
Valid prediction for Augustus_model.g35801.t1
Valid prediction for snap_scaffold_24-snap.617-T1
Valid prediction for GlimmerHMM_glimmerT_53461-T1
Valid prediction for GlimmerHMM_glimmerT_53449-T1
Valid prediction for GeneMark_model.93161_t
Valid prediction for GlimmerHMM_glimmerT_53451-T1
Valid prediction for snap_scaffold_24-snap.574-T1
Valid prediction for GeneMark_model.93101_t
Valid prediction for GeneMark_model.93145_t
Valid prediction for GeneMark_model.93118_t
Valid prediction for GeneMark_model.93163_t
Valid prediction for Augustus_model.g35793.t1
Valid prediction for snap_scaffold_24-snap.590-T1
Valid prediction for GlimmerHMM_glimmerT_53434-T1
Valid prediction for GeneMark_model.93091_t
Valid prediction for GeneMark_model.93142_t
Valid prediction for snap_scaffold_24-snap.599-T1
Valid prediction for GeneMark_model.93087_t
Valid prediction for GlimmerHMM_glimmerT_53450-T1
Valid prediction for Augustus_model.g35805.t1
Valid prediction for GeneMark_model.93099_t
Valid prediction for GeneMark_model.93096_t
Valid prediction for Augustus_model.g35788.t1
Valid prediction for GeneMark_model.93130_t
Valid prediction for GlimmerHMM_glimmerT_53439-T1
Valid prediction for GlimmerHMM_glimmerT_53438-T1
Valid prediction for GlimmerHMM_glimmerT_53436-T1
Valid prediction for snap_scaffold_24-snap.612-T1
Valid prediction for GeneMark_model.93116_t
Valid prediction for GeneMark_model.93143_t
Valid prediction for GeneMark_model.93134_t
Valid prediction for snap_scaffold_24-snap.614-T1
Valid prediction for GeneMark_model.93182_t
Valid prediction for GeneMark_model.93108_t
Valid prediction for snap_scaffold_24-snap.594-T1
Valid prediction for snap_scaffold_24-snap.610-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.93110_t
Valid prediction for GeneMark_model.93094_t
Valid prediction for snap_scaffold_24-snap.579-T1
Valid prediction for GeneMark_model.93125_t
Valid prediction for snap_scaffold_24-snap.597-T1
Valid prediction for GeneMark_model.93181_t
Valid prediction for GlimmerHMM_glimmerT_53462-T1
Valid prediction for Augustus_model.g35791.t1
Valid prediction for snap_scaffold_24-snap.621-T1
Valid prediction for GeneMark_model.93157_t
Valid prediction for GeneMark_model.93139_t
Valid prediction for GeneMark_model.93180_t
Valid prediction for snap_scaffold_24-snap.607-T1
Valid prediction for GeneMark_model.93102_t
Valid prediction for GeneMark_model.93104_t
Valid prediction for Augustus_model.g35797.t1
Valid prediction for snap_scaffold_24-snap.630-T1
Valid prediction for GeneMark_model.93147_t
Valid prediction for snap_scaffold_24-snap.587-T1
Valid prediction for snap_scaffold_24-snap.576-T1
Valid prediction for GeneMark_model.93150_t
Valid prediction for snap_scaffold_24-snap.588-T1
Valid prediction for GeneMark_model.93155_t
Valid prediction for GeneMark_model.93090_t
Valid prediction for Augustus_model.g35798.t1
Valid prediction for GlimmerHMM_glimmerT_53433-T1
Valid prediction for GeneMark_model.93158_t
Valid prediction for GlimmerHMM_glimmerT_53429-T1
Valid prediction for snap_scaffold_24-snap.624-T1
Valid prediction for GeneMark_model.93105_t
Valid prediction for Augustus_model.g35794.t1
Valid prediction for snap_scaffold_24-snap.592-T1
Valid prediction for GeneMark_model.93120_t
Valid prediction for snap_scaffold_24-snap.626-T1
Valid prediction for snap_scaffold_24-snap.620-T1
Valid prediction for GeneMark_model.93122_t
Valid prediction for snap_scaffold_24-snap.627-T1
Valid prediction for GeneMark_model.93113_t
Valid prediction for snap_scaffold_24-snap.583-T1
Valid prediction for GeneMark_model.93185_t
Valid prediction for GeneMark_model.93126_t
Valid prediction for GeneMark_model.93172_t
Valid prediction for snap_scaffold_24-snap.586-T1
Valid prediction for snap_scaffold_24-snap.616-T1
Valid prediction for snap_scaffold_24-snap.629-T1
Valid prediction for GeneMark_model.93137_t
Valid prediction for Augustus_model.g35792.t1
Valid prediction for GeneMark_model.93124_t
Valid prediction for GeneMark_model.93166_t
Valid prediction for GlimmerHMM_glimmerT_53428-T1
Valid prediction for GeneMark_model.93174_t
Valid prediction for GeneMark_model.93178_t
Valid prediction for GeneMark_model.93176_t
Valid prediction for snap_scaffold_24-snap.604-T1
Valid prediction for snap_scaffold_24-snap.623-T1
Valid prediction for GeneMark_model.93187_t
Valid prediction for GeneMark_model.93140_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7852, rend_intergenic: 5039  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10245, rend_intergenic: 8019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10943, rend_intergenic: 10851  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14638, rend_intergenic: 12158  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27468, rend_intergenic: 18875  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39266, rend_intergenic: 29031  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39716, rend_intergenic: 39362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45527, rend_intergenic: 43840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56289, rend_intergenic: 45803  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58848, rend_intergenic: 56882  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96083, rend_intergenic: 60325  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106329, rend_intergenic: 98509  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112685, rend_intergenic: 106368  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129261, rend_intergenic: 113611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136406, rend_intergenic: 132749  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138416, rend_intergenic: 136841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147709, rend_intergenic: 138561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152251, rend_intergenic: 147997  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155604, rend_intergenic: 152266  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163389, rend_intergenic: 160075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175681, rend_intergenic: 167512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181713, rend_intergenic: 175847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188906, rend_intergenic: 184936  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200296, rend_intergenic: 198086  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206120, rend_intergenic: 203876  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208304, rend_intergenic: 207027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223523, rend_intergenic: 215438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229650, rend_intergenic: 225849  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244921, rend_intergenic: 243817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246468, rend_intergenic: 245777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 252716
-exon list size: 1199


building trellis

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35.6    
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36.6    
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37.1    
37.1    
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37.3    
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37.5    
37.6    
37.6    
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37.9    
38.0    
38.1    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.1    
39.2    
39.3    
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39.5    
39.6    
39.6    
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39.8    
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40.0    
40.0    
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40.2    
40.3    
40.4    
40.5    
40.5    
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40.7    
40.8    
40.9    
41.0    
41.0    
41.1    
41.2    
41.3    
41.4    
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41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.0    
60.1    
60.2    
60.3    
60.4    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
79.9    
80.0    
80.1    
80.2    
80.3    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.8    
99.9    
-found 74 predictions from path traversal
Error with prediction: snap lend_intergenic: 7852, rend_intergenic: 5039  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10245, rend_intergenic: 8019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 10943, rend_intergenic: 10851  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14638, rend_intergenic: 12158  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27468, rend_intergenic: 18875  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39266, rend_intergenic: 29031  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39716, rend_intergenic: 39362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45527, rend_intergenic: 43840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56289, rend_intergenic: 45803  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58848, rend_intergenic: 56882  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96083, rend_intergenic: 60325  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106329, rend_intergenic: 98509  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112685, rend_intergenic: 106368  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129261, rend_intergenic: 113611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136406, rend_intergenic: 132749  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138416, rend_intergenic: 136841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147709, rend_intergenic: 138561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152251, rend_intergenic: 147997  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155604, rend_intergenic: 152266  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163389, rend_intergenic: 160075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175681, rend_intergenic: 167512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181713, rend_intergenic: 175847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188906, rend_intergenic: 184936  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200296, rend_intergenic: 198086  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206120, rend_intergenic: 203876  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208304, rend_intergenic: 207027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223523, rend_intergenic: 215438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229650, rend_intergenic: 225849  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244921, rend_intergenic: 243817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246468, rend_intergenic: 245777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support