-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_1787428-2131807 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.92910_t Valid prediction for snap_scaffold_24-snap.444-T1 Valid prediction for snap_scaffold_24-snap.433-T1 Valid prediction for Augustus_model.g35745.t1 Valid prediction for snap_scaffold_24-snap.438-T1 Valid prediction for GeneMark_model.92885_t Valid prediction for GeneMark_model.92851_t Valid prediction for Augustus_model.g35742.t1 Valid prediction for snap_scaffold_24-snap.473-T1 Valid prediction for GeneMark_model.92882_t Valid prediction for Augustus_model.g35733.t1 Valid prediction for GeneMark_model.92868_t Valid prediction for GeneMark_model.92843_t Valid prediction for snap_scaffold_24-snap.461-T1 Valid prediction for GeneMark_model.92854_t Couldn't classify 78554, 78595 Sorry, prediction pasa_asmbl_32090.p1 fails validation. (AAT) CC 78554-78595 GT AGG (GTG) AG 79198-79563 TC AAT -recovered pasa_asmbl_32090.p1, terminal, 79198, 79563 Valid prediction for snap_scaffold_24-snap.477-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for GeneMark_model.92884_t Valid prediction for GeneMark_model.92837_t Valid prediction for GeneMark_model.92900_t Valid prediction for GeneMark_model.92929_t Valid prediction for Augustus_model.g35731.t1 Valid prediction for GlimmerHMM_glimmerT_53352-T1 Valid prediction for GeneMark_model.92892_t Valid prediction for GlimmerHMM_glimmerT_53350-T1 Valid prediction for snap_scaffold_24-snap.451-T1 Valid prediction for GeneMark_model.92888_t Valid prediction for GeneMark_model.92898_t Valid prediction for snap_scaffold_24-snap.488-T1 Valid prediction for snap_scaffold_24-snap.426-T1 Valid prediction for GeneMark_model.92919_t Valid prediction for GeneMark_model.92840_t Valid prediction for GeneMark_model.92935_t Valid prediction for GeneMark_model.92877_t Valid prediction for Augustus_model.g35750.t1 Valid prediction for snap_scaffold_24-snap.491-T1 Valid prediction for snap_scaffold_24-snap.471-T1 Valid prediction for GeneMark_model.92908_t Valid prediction for GeneMark_model.92873_t Valid prediction for snap_scaffold_24-snap.452-T1 Valid prediction for GeneMark_model.92905_t Valid prediction for GeneMark_model.92903_t Valid prediction for GeneMark_model.92932_t Valid prediction for GlimmerHMM_glimmerT_53364-T1 Valid prediction for snap_scaffold_24-snap.468-T1 Valid prediction for GeneMark_model.92925_t Valid prediction for GeneMark_model.92861_t Valid prediction for GeneMark_model.92879_t Valid prediction for GlimmerHMM_glimmerT_53370-T1 Valid prediction for snap_scaffold_24-snap.439-T1 Valid prediction for snap_scaffold_24-snap.469-T1 Valid prediction for GeneMark_model.92896_t Valid prediction for snap_scaffold_24-snap.429-T1 Valid prediction for snap_scaffold_24-snap.424-T1 Valid prediction for snap_scaffold_24-snap.453-T1 Valid prediction for GeneMark_model.92867_t Valid prediction for GeneMark_model.92922_t Valid prediction for snap_scaffold_24-snap.479-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for GeneMark_model.92857_t Valid prediction for snap_scaffold_24-snap.457-T1 Valid prediction for GeneMark_model.92841_t Valid prediction for GlimmerHMM_glimmerT_53341-T1 Valid prediction for GeneMark_model.92848_t Valid prediction for snap_scaffold_24-snap.486-T1 Valid prediction for snap_scaffold_24-snap.454-T1 Valid prediction for snap_scaffold_24-snap.447-T1 Valid prediction for snap_scaffold_24-snap.428-T1 Valid prediction for GeneMark_model.92870_t Valid prediction for snap_scaffold_24-snap.463-T1 Valid prediction for GeneMark_model.92850_t Valid prediction for GeneMark_model.92831_t Valid prediction for GeneMark_model.92845_t Valid prediction for GlimmerHMM_glimmerT_53362-T1 Valid prediction for snap_scaffold_24-snap.474-T1 Valid prediction for snap_scaffold_24-snap.483-T1 Valid prediction for snap_scaffold_24-snap.464-T1 Valid prediction for GeneMark_model.92894_t Valid prediction for GlimmerHMM_glimmerT_53345-T1 Valid prediction for GeneMark_model.92878_t Valid prediction for snap_scaffold_24-snap.476-T1 Valid prediction for GeneMark_model.92916_t Valid prediction for snap_scaffold_24-snap.466-T1 Valid prediction for snap_scaffold_24-snap.480-T1 Valid prediction for GeneMark_model.92914_t Valid prediction for GeneMark_model.92918_t Valid prediction for snap_scaffold_24-snap.490-T1 Valid prediction for GeneMark_model.92880_t Valid prediction for GeneMark_model.92846_t Valid prediction for snap_scaffold_24-snap.475-T1 Valid prediction for GeneMark_model.92835_t Valid prediction for GeneMark_model.92865_t Valid prediction for GlimmerHMM_glimmerT_53343-T1 Valid prediction for GeneMark_model.92828_t Valid prediction for GlimmerHMM_glimmerT_53371-T1 Valid prediction for GeneMark_model.92927_t Valid prediction for snap_scaffold_24-snap.484-T1 Valid prediction for GeneMark_model.92912_t Valid prediction for GeneMark_model.92875_t Valid prediction for snap_scaffold_24-snap.456-T1 Valid prediction for GeneMark_model.92829_t Valid prediction for snap_scaffold_24-snap.436-T1 Valid prediction for snap_scaffold_24-snap.434-T1 Valid prediction for snap_scaffold_24-snap.445-T1 Valid prediction for CodingQuarry_transcript_37171-T1 Valid prediction for snap_scaffold_24-snap.435-T1 Valid prediction for GeneMark_model.92934_t Valid prediction for snap_scaffold_24-snap.441-T1 Valid prediction for GeneMark_model.92859_t Valid prediction for GeneMark_model.92863_t Valid prediction for GeneMark_model.92833_t Valid prediction for GeneMark_model.92924_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g35751.t1 Valid prediction for GlimmerHMM_glimmerT_53366-T1 Valid prediction for GeneMark_model.92931_t Valid prediction for snap_scaffold_24-snap.443-T1 Valid prediction for GeneMark_model.92930_t Valid prediction for GlimmerHMM_glimmerT_53358-T1 Valid prediction for GeneMark_model.92897_t Valid prediction for snap_scaffold_24-snap.481-T1 Valid prediction for snap_scaffold_24-snap.446-T1 Couldn't classify 272284, 272330 Couldn't classify 275671, 275760 Sorry, prediction pasa_asmbl_32729.p1 fails validation. (GCG) AG 272284-272330 GT AGG (CGA) AG 274515-274774 GT TGG (GTG) AG 275131-275222 GT GTG (ACG) AG 275671-275760 AG ACA -recovered pasa_asmbl_32729.p1, internal, 272284, 272330 -recovered pasa_asmbl_32729.p1, internal, 274515, 274774 -recovered pasa_asmbl_32729.p1, internal, 275131, 275222 Valid prediction for pasa_asmbl_32741.p1 Valid prediction for GeneMark_model.92852_t Valid prediction for GeneMark_model.92869_t Valid prediction for Augustus_model.g35727.t1 Valid prediction for GlimmerHMM_glimmerT_53338-T1 Valid prediction for Augustus_model.g35748.t1 Couldn't classify 207723, 207832 Sorry, prediction pasa_asmbl_32735.p1 fails validation. (GAG) AC 207723-207832 GT TGG (GGA) AG 208147-208303 GT AGG (AAC) AG 209820-209902 GT CGG (AGA) AG 212565-212637 GT AGG (GAC) AG 213836-213997 GT TGG (ATC) AG 214348-214545 GT AGG (GTG) AG 215801-216175 GT CGG (GAA) AG 216265-216333 GT AGG (GTG) AG 216499-216664 GT CCG (ATG) AG 217116-217160 GT AGG (TCG) AG 217262-217671 GT CTG (AAT) AG 217809-217881 GT AGG (ATC) AG 218781-218851 GT AGG (TCA) AG 219150-219294 GT AGG (GCA) AG 219497-219696 GT AAG (ACT) AG 220878-221093 GC GAG -recovered pasa_asmbl_32735.p1, initial, 217116, 217160 -recovered pasa_asmbl_32735.p1, terminal, 220878, 221093 -recovered pasa_asmbl_32735.p1, internal, 208147, 208303 -recovered pasa_asmbl_32735.p1, internal, 209820, 209902 -recovered pasa_asmbl_32735.p1, internal, 212565, 212637 -recovered pasa_asmbl_32735.p1, internal, 213836, 213997 -recovered pasa_asmbl_32735.p1, internal, 214348, 214545 -recovered pasa_asmbl_32735.p1, internal, 215801, 216175 -recovered pasa_asmbl_32735.p1, internal, 216265, 216333 -recovered pasa_asmbl_32735.p1, internal, 216499, 216664 -recovered pasa_asmbl_32735.p1, internal, 217116, 217160 -recovered pasa_asmbl_32735.p1, internal, 217262, 217671 -recovered pasa_asmbl_32735.p1, internal, 217809, 217881 -recovered pasa_asmbl_32735.p1, internal, 218781, 218851 -recovered pasa_asmbl_32735.p1, internal, 219150, 219294 -recovered pasa_asmbl_32735.p1, internal, 219497, 219696 -recovered pasa_asmbl_32735.p1, internal, 220878, 221093 Valid prediction for snap_scaffold_24-snap.442-T1 Valid prediction for CodingQuarry_transcript_37176-T1 Valid prediction for Augustus_model.g35729.t1 Couldn't classify 219497, 219696 Sorry, prediction Augustus_model.g35737.t1 fails validation. (ATG) TA 201768-201836 GT AGG (GTG) AG 203100-203189 GT AGG (ATC) AG 203492-203539 GT AGG (CAA) AG 203652-203747 GT TTG (CAT) AG 204205-204267 GT AGG (GCG) AG 204523-204648 GT GGG (GTC) AG 205223-205282 GT TGG (GCT) AG 206149-206352 GT CGG (TGG) AG 207687-207832 GT TGG (GGA) AG 208147-208303 GT AGG (AAC) AG 209820-209902 GT CGG (AGA) AG 212565-212637 GT AGG (GAC) AG 213836-213997 GT TGG (ATC) AG 214348-214545 GT AGG (GTG) AG 215801-216175 GT CGG (GAA) AG 216265-216333 GT AGG (GTG) AG 216499-216664 GT CCG (ATG) AG 217116-217160 GT AGG (TCG) AG 217262-217671 GT CTG (AAT) AG 217809-217881 GT AGG (ATC) AG 218781-218851 GT AGG (TCA) AG 219150-219294 GT AGG (GCA) AG 219497-219696 GT AAG -recovered Augustus_model.g35737.t1, initial, 201768, 201836 -recovered Augustus_model.g35737.t1, initial, 217116, 217160 -recovered Augustus_model.g35737.t1, internal, 203100, 203189 -recovered Augustus_model.g35737.t1, internal, 203492, 203539 -recovered Augustus_model.g35737.t1, internal, 203652, 203747 -recovered Augustus_model.g35737.t1, internal, 204205, 204267 -recovered Augustus_model.g35737.t1, internal, 204523, 204648 -recovered Augustus_model.g35737.t1, internal, 205223, 205282 -recovered Augustus_model.g35737.t1, internal, 206149, 206352 -recovered Augustus_model.g35737.t1, internal, 207687, 207832 -recovered Augustus_model.g35737.t1, internal, 208147, 208303 -recovered Augustus_model.g35737.t1, internal, 209820, 209902 -recovered Augustus_model.g35737.t1, internal, 212565, 212637 -recovered Augustus_model.g35737.t1, internal, 213836, 213997 -recovered Augustus_model.g35737.t1, internal, 214348, 214545 -recovered Augustus_model.g35737.t1, internal, 215801, 216175 -recovered Augustus_model.g35737.t1, internal, 216265, 216333 -recovered Augustus_model.g35737.t1, internal, 216499, 216664 -recovered Augustus_model.g35737.t1, internal, 217116, 217160 -recovered Augustus_model.g35737.t1, internal, 217262, 217671 -recovered Augustus_model.g35737.t1, internal, 217809, 217881 -recovered Augustus_model.g35737.t1, internal, 218781, 218851 -recovered Augustus_model.g35737.t1, internal, 219150, 219294 -recovered Augustus_model.g35737.t1, internal, 219497, 219696 Valid prediction for CodingQuarry_transcript_37175-T1 Valid prediction for GeneMark_model.92886_t Valid prediction for GeneMark_model.92874_t Valid prediction for GeneMark_model.92933_t Valid prediction for GeneMark_model.92844_t Valid prediction for GlimmerHMM_glimmerT_53353-T1 Valid prediction for GeneMark_model.92901_t Valid prediction for GeneMark_model.92855_t Valid prediction for GlimmerHMM_glimmerT_53355-T1 Valid prediction for CodingQuarry_transcript_37174-T1 Valid prediction for Augustus_model.g35740.t1 Valid prediction for snap_scaffold_24-snap.487-T1 Valid prediction for snap_scaffold_24-snap.470-T1 Valid prediction for GlimmerHMM_glimmerT_53365-T1 Valid prediction for GlimmerHMM_glimmerT_53339-T1 Valid prediction for snap_scaffold_24-snap.478-T1 Couldn't classify 187001, 187112 Sorry, prediction pasa_asmbl_32742.p1 fails validation. (GAC) GA 187001-187112 GT AGG (GTC) AG 187239-187504 GT AGG (GGC) AG 187968-188143 GT AGG (TAA) AG 189940-190064 GT AGG (GGG) AG 190418-190665 AG AGA -recovered pasa_asmbl_32742.p1, terminal, 190418, 190665 -recovered pasa_asmbl_32742.p1, internal, 187239, 187504 -recovered pasa_asmbl_32742.p1, internal, 187968, 188143 -recovered pasa_asmbl_32742.p1, internal, 189940, 190064 Valid prediction for Augustus_model.g35736.t1 Valid prediction for snap_scaffold_24-snap.425-T1 Valid prediction for GeneMark_model.92847_t Valid prediction for snap_scaffold_24-snap.437-T1 Valid prediction for GlimmerHMM_glimmerT_53367-T1 Valid prediction for GeneMark_model.92913_t Valid prediction for GeneMark_model.92928_t Valid prediction for GeneMark_model.92834_t Valid prediction for GeneMark_model.92917_t Valid prediction for GeneMark_model.92926_t Valid prediction for snap_scaffold_24-snap.449-T1 Valid prediction for GeneMark_model.92915_t Valid prediction for snap_scaffold_24-snap.430-T1 Valid prediction for GlimmerHMM_glimmerT_53347-T1 Couldn't classify 62120, 62338 Sorry, prediction pasa_asmbl_32761.p3 fails validation. (TGT) CG 62120-62338 GT TGG (ATG) AG 62861-62988 GT AGG (AGG) AG 65881-65896 AC GAA -recovered pasa_asmbl_32761.p3, initial, 62861, 62988 -recovered pasa_asmbl_32761.p3, terminal, 65881, 65896 -recovered pasa_asmbl_32761.p3, internal, 62861, 62988 Valid prediction for GeneMark_model.92866_t Valid prediction for CodingQuarry_transcript_37173-T1 Couldn't classify 175978, 176142 Sorry, prediction pasa_asmbl_32748.p1 fails validation. (GGA) AC 175978-176142 GT CGG (GAG) AG 176943-177027 GT CAG (TAT) AG 177234-177344 GT AGG (GTT) AG 177897-177960 GT AGG (GTC) AG 178042-178182 GT TTG (TCC) AG 178501-178579 GT GGG (GAG) AG 178700-178791 GT AGG (CTT) AG 178971-179106 GT GGG (TTG) AG 179418-179492 GC GAG -recovered pasa_asmbl_32748.p1, terminal, 179418, 179492 -recovered pasa_asmbl_32748.p1, internal, 176943, 177027 -recovered pasa_asmbl_32748.p1, internal, 177234, 177344 -recovered pasa_asmbl_32748.p1, internal, 177897, 177960 -recovered pasa_asmbl_32748.p1, internal, 178042, 178182 -recovered pasa_asmbl_32748.p1, internal, 178501, 178579 -recovered pasa_asmbl_32748.p1, internal, 178700, 178791 -recovered pasa_asmbl_32748.p1, internal, 178971, 179106 -recovered pasa_asmbl_32748.p1, internal, 179418, 179492 Valid prediction for snap_scaffold_24-snap.423-T1 Valid prediction for GeneMark_model.92891_t Valid prediction for GeneMark_model.92889_t Valid prediction for GeneMark_model.92911_t Valid prediction for GeneMark_model.92860_t Valid prediction for Augustus_model.g35726.t1 Valid prediction for GeneMark_model.92881_t Valid prediction for GlimmerHMM_glimmerT_53368-T1 Valid prediction for HiQ_model.g35738.t1 Valid prediction for Augustus_model.g35754.t1 Valid prediction for GeneMark_model.92923_t Valid prediction for Augustus_model.g35744.t1 Valid prediction for GlimmerHMM_glimmerT_53342-T1 Valid prediction for snap_scaffold_24-snap.440-T1 Valid prediction for GeneMark_model.92858_t Valid prediction for GeneMark_model.92856_t Valid prediction for GlimmerHMM_glimmerT_53349-T1 Valid prediction for GeneMark_model.92864_t Valid prediction for GeneMark_model.92899_t Valid prediction for Augustus_model.g35749.t1 Valid prediction for GlimmerHMM_glimmerT_53357-T1 Valid prediction for GeneMark_model.92836_t Valid prediction for GeneMark_model.92872_t Valid prediction for GeneMark_model.92907_t Valid prediction for GeneMark_model.92830_t Couldn't classify 132814, 132882 Couldn't classify 135174, 135313 Sorry, prediction pasa_asmbl_32757.p1 fails validation. (CAG) GG 132814-132882 GT AGG (GAA) AG 133103-133187 GT GGG (GTG) AG 133301-133478 GT AGG (AGA) AG 133882-134066 GT GGG (CGT) AG 134378-134530 GT CTG (GCT) AG 134846-134935 GT AGG (AGG) AG 135174-135313 GG GCG -recovered pasa_asmbl_32757.p1, internal, 133103, 133187 -recovered pasa_asmbl_32757.p1, internal, 133301, 133478 -recovered pasa_asmbl_32757.p1, internal, 133882, 134066 -recovered pasa_asmbl_32757.p1, internal, 134378, 134530 -recovered pasa_asmbl_32757.p1, internal, 134846, 134935 Valid prediction for Augustus_model.g35728.t1 Valid prediction for Augustus_model.g35746.t1 Valid prediction for GeneMark_model.92906_t Valid prediction for Augustus_model.g35734.t1 Valid prediction for GeneMark_model.92902_t Valid prediction for GeneMark_model.92832_t Valid prediction for snap_scaffold_24-snap.431-T1 Valid prediction for GeneMark_model.92838_t Valid prediction for GlimmerHMM_glimmerT_53346-T1 Valid prediction for snap_scaffold_24-snap.450-T1 Valid prediction for GlimmerHMM_glimmerT_53337-T1 Couldn't classify 47498, 47818 Sorry, prediction pasa_asmbl_32763.p1 fails validation. (GCG) AG 47498-47818 AG TGA Valid prediction for GlimmerHMM_glimmerT_53344-T1 Valid prediction for GeneMark_model.92936_t Couldn't classify 163164, 163265 Couldn't classify 168457, 168495 Sorry, prediction pasa_asmbl_33292.p1 fails validation. (GGA) GG 163164-163265 GT CTG (GAG) AG 166255-166350 GT AGG (CTC) AG 166731-166778 GT GAG (AAA) AG 167745-167774 GT TTG (AGT) AG 167896-167946 GT AGG (GAT) AG 168457-168495 GT TAG -recovered pasa_asmbl_33292.p1, internal, 166255, 166350 -recovered pasa_asmbl_33292.p1, internal, 166731, 166778 -recovered pasa_asmbl_33292.p1, internal, 167745, 167774 -recovered pasa_asmbl_33292.p1, internal, 167896, 167946 -recovered pasa_asmbl_33292.p1, internal, 168457, 168495 Valid prediction for Augustus_model.g35753.t1 Valid prediction for Augustus_model.g35732.t1 Valid prediction for snap_scaffold_24-snap.460-T1 Valid prediction for snap_scaffold_24-snap.455-T1 Valid prediction for snap_scaffold_24-snap.482-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for GeneMark_model.92895_t Valid prediction for snap_scaffold_24-snap.489-T1 Valid prediction for GeneMark_model.92920_t Valid prediction for snap_scaffold_24-snap.485-T1 Valid prediction for Augustus_model.g35735.t1 Valid prediction for snap_scaffold_24-snap.467-T1 Valid prediction for GlimmerHMM_glimmerT_53356-T1 Valid prediction for Augustus_model.g35743.t1 Valid prediction for Augustus_model.g35747.t1 Valid prediction for GeneMark_model.92842_t Valid prediction for GlimmerHMM_glimmerT_53348-T1 Valid prediction for GeneMark_model.92909_t Valid prediction for GeneMark_model.92883_t Valid prediction for GeneMark_model.92853_t Valid prediction for GlimmerHMM_glimmerT_53354-T1 Valid prediction for GeneMark_model.92862_t Valid prediction for Augustus_model.g35752.t1 Valid prediction for GlimmerHMM_glimmerT_53361-T1 Valid prediction for Augustus_model.g35741.t1 Valid prediction for GlimmerHMM_glimmerT_53340-T1 Valid prediction for pasa_asmbl_32752.p1 Valid prediction for Augustus_model.g35739.t1 Valid prediction for GlimmerHMM_glimmerT_53359-T1 Valid prediction for snap_scaffold_24-snap.465-T1 Valid prediction for GeneMark_model.92890_t Valid prediction for snap_scaffold_24-snap.427-T1 Couldn't classify 68439, 68564 Sorry, prediction pasa_asmbl_32758.p1 fails validation. (GTT) AG 68439-68564 GT AGG (GCA) AG 68839-68980 GT GGG (GTG) AG 69654-69832 GT AGG (GCC) AG 69942-70481 GA AGG -recovered pasa_asmbl_32758.p1, terminal, 69942, 70481 -recovered pasa_asmbl_32758.p1, internal, 68439, 68564 -recovered pasa_asmbl_32758.p1, internal, 68839, 68980 -recovered pasa_asmbl_32758.p1, internal, 69654, 69832 Valid prediction for GeneMark_model.92876_t Valid prediction for Augustus_model.g35730.t1 Valid prediction for GeneMark_model.92849_t Valid prediction for snap_scaffold_24-snap.459-T1 Valid prediction for snap_scaffold_24-snap.462-T1 Valid prediction for GeneMark_model.92893_t Valid prediction for GlimmerHMM_glimmerT_53363-T1 Valid prediction for Augustus_model.g35755.t1 Valid prediction for GlimmerHMM_glimmerT_53351-T1 Valid prediction for snap_scaffold_24-snap.432-T1 Valid prediction for snap_scaffold_24-snap.458-T1 Couldn't classify 260501, 260658 Sorry, prediction pasa_asmbl_32731.p4 fails validation. (GTC) AC 260501-260658 GT GAG (GTG) AG 261086-261257 GC GAG -recovered pasa_asmbl_32731.p4, terminal, 261086, 261257 -recovered pasa_asmbl_32731.p4, internal, 261086, 261257 Valid prediction for GlimmerHMM_glimmerT_53360-T1 Valid prediction for GeneMark_model.92921_t Valid prediction for GeneMark_model.92904_t Valid prediction for GeneMark_model.92871_t Valid prediction for snap_scaffold_24-snap.472-T1 Valid prediction for GeneMark_model.92887_t Valid prediction for GlimmerHMM_glimmerT_53369-T1 Valid prediction for snap_scaffold_24-snap.448-T1 Couldn't classify 298118, 298192 Couldn't classify 298967, 299048 Sorry, prediction pasa_asmbl_33251.p1 fails validation. (ATC) GG 298118-298192 GT AGG (TGT) AG 298553-298676 GT GAG (TGC) AG 298830-298893 GT AGG (GTA) AG 298967-299048 GT ATG add_exon() Sorry, pasa_asmbl_33251.p1 298553-298676-terminal-3 is invalid. -recovered pasa_asmbl_33251.p1, terminal, 298553, 298676 -recovered pasa_asmbl_33251.p1, internal, 298553, 298676 -recovered pasa_asmbl_33251.p1, internal, 298830, 298893 -recovered pasa_asmbl_33251.p1, internal, 298967, 299048 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 21009, rend_intergenic: 10132 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 26451, rend_intergenic: 21401 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28309, rend_intergenic: 27001 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29741, rend_intergenic: 28456 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42967, rend_intergenic: 30333 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49004, rend_intergenic: 43531 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75648, rend_intergenic: 49662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90877, rend_intergenic: 81906 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97494, rend_intergenic: 96513 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 110041, rend_intergenic: 98275 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115922, rend_intergenic: 110702 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142696, rend_intergenic: 120932 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152064, rend_intergenic: 148127 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179147, rend_intergenic: 163079 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185545, rend_intergenic: 180350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189258, rend_intergenic: 185546 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189435, rend_intergenic: 189274 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 214120, rend_intergenic: 210654 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215734, rend_intergenic: 214599 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228833, rend_intergenic: 216869 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229589, rend_intergenic: 228870 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 233023, rend_intergenic: 229661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 239998, rend_intergenic: 236790 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 246832, rend_intergenic: 244021 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 257615, rend_intergenic: 255388 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 285204, rend_intergenic: 260696 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291253, rend_intergenic: 285565 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 300328, rend_intergenic: 291914 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 310866, rend_intergenic: 305058 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 319397, rend_intergenic: 311157 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 321334, rend_intergenic: 320129 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 322676, rend_intergenic: 322031 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 325163, rend_intergenic: 323484 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 331264, rend_intergenic: 326918 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 340244, rend_intergenic: 331284 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 344380 -exon list size: 1747 building trellis 0.1 0.1 0.2 0.2 0.3 0.3 0.4 0.5 0.5 0.6 0.6 0.7 0.7 0.8 0.9 0.9 1.0 1.0 1.1 1.1 1.2 1.3 1.3 1.4 1.4 1.5 1.5 1.6 1.7 1.7 1.8 1.8 1.9 1.9 2.0 2.1 2.1 2.2 2.2 2.3 2.3 2.4 2.5 2.5 2.6 2.6 2.7 2.7 2.8 2.9 2.9 3.0 3.0 3.1 3.1 3.2 3.3 3.3 3.4 3.4 3.5 3.5 3.6 3.7 3.7 3.8 3.8 3.9 3.9 4.0 4.1 4.1 4.2 4.2 4.3 4.3 4.4 4.5 4.5 4.6 4.6 4.7 4.7 4.8 4.9 4.9 5.0 5.0 5.1 5.1 5.2 5.3 5.3 5.4 5.4 5.5 5.5 5.6 5.7 5.7 5.8 5.8 5.9 5.9 6.0 6.1 6.1 6.2 6.2 6.3 6.3 6.4 6.5 6.5 6.6 6.6 6.7 6.7 6.8 6.9 6.9 7.0 7.0 7.1 7.1 7.2 7.3 7.3 7.4 7.4 7.5 7.5 7.6 7.7 7.7 7.8 7.8 7.9 7.9 8.0 8.1 8.1 8.2 8.2 8.3 8.3 8.4 8.5 8.5 8.6 8.6 8.7 8.7 8.8 8.9 8.9 9.0 9.0 9.1 9.1 9.2 9.3 9.3 9.4 9.4 9.5 9.5 9.6 9.7 9.7 9.8 9.8 9.9 9.9 10.0 10.1 10.1 10.2 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.6 10.7 10.7 10.8 10.9 10.9 11.0 11.0 11.1 11.1 11.2 11.3 11.3 11.4 11.4 11.5 11.5 11.6 11.7 11.7 11.8 11.8 11.9 11.9 12.0 12.1 12.1 12.2 12.2 12.3 12.3 12.4 12.5 12.5 12.6 12.6 12.7 12.8 12.8 12.9 12.9 13.0 13.0 13.1 13.2 13.2 13.3 13.3 13.4 13.4 13.5 13.6 13.6 13.7 13.7 13.8 13.8 13.9 14.0 14.0 14.1 14.1 14.2 14.2 14.3 14.4 14.4 14.5 14.5 14.6 14.6 14.7 14.8 14.8 14.9 14.9 15.0 15.0 15.1 15.2 15.2 15.3 15.3 15.4 15.4 15.5 15.6 15.6 15.7 15.7 15.8 15.8 15.9 16.0 16.0 16.1 16.1 16.2 16.2 16.3 16.4 16.4 16.5 16.5 16.6 16.6 16.7 16.8 16.8 16.9 16.9 17.0 17.0 17.1 17.2 17.2 17.3 17.3 17.4 17.4 17.5 17.6 17.6 17.7 17.7 17.8 17.8 17.9 18.0 18.0 18.1 18.1 18.2 18.2 18.3 18.4 18.4 18.5 18.5 18.6 18.6 18.7 18.8 18.8 18.9 18.9 19.0 19.0 19.1 19.2 19.2 19.3 19.3 19.4 19.4 19.5 19.6 19.6 19.7 19.7 19.8 19.8 19.9 20.0 20.0 20.1 20.1 20.2 20.2 20.3 20.4 20.4 20.5 20.5 20.6 20.6 20.7 20.8 20.8 20.9 20.9 21.0 21.0 21.1 21.2 21.2 21.3 21.3 21.4 21.4 21.5 21.6 21.6 21.7 21.7 21.8 21.8 21.9 22.0 22.0 22.1 22.1 22.2 22.2 22.3 22.4 22.4 22.5 22.5 22.6 22.6 22.7 22.8 22.8 22.9 22.9 23.0 23.0 23.1 23.2 23.2 23.3 23.3 23.4 23.4 23.5 23.6 23.6 23.7 23.7 23.8 23.8 23.9 24.0 24.0 24.1 24.1 24.2 24.2 24.3 24.4 24.4 24.5 24.5 24.6 24.6 24.7 24.8 24.8 24.9 24.9 25.0 25.0 25.1 25.2 25.2 25.3 25.3 25.4 25.4 25.5 25.6 25.6 25.7 25.7 25.8 25.8 25.9 26.0 26.0 26.1 26.1 26.2 26.2 26.3 26.4 26.4 26.5 26.5 26.6 26.6 26.7 26.8 26.8 26.9 26.9 27.0 27.0 27.1 27.2 27.2 27.3 27.3 27.4 27.4 27.5 27.6 27.6 27.7 27.7 27.8 27.8 27.9 28.0 28.0 28.1 28.1 28.2 28.2 28.3 28.4 28.4 28.5 28.5 28.6 28.6 28.7 28.8 28.8 28.9 28.9 29.0 29.0 29.1 29.2 29.2 29.3 29.3 29.4 29.4 29.5 29.6 29.6 29.7 29.7 29.8 29.8 29.9 30.0 30.0 30.1 30.1 30.2 30.2 30.3 30.4 30.4 30.5 30.5 30.6 30.6 30.7 30.8 30.8 30.9 30.9 31.0 31.0 31.1 31.2 31.2 31.3 31.3 31.4 31.4 31.5 31.6 31.6 31.7 31.7 31.8 31.8 31.9 32.0 32.0 32.1 32.1 32.2 32.2 32.3 32.4 32.4 32.5 32.5 32.6 32.6 32.7 32.8 32.8 32.9 32.9 33.0 33.0 33.1 33.2 33.2 33.3 33.3 33.4 33.4 33.5 33.6 33.6 33.7 33.7 33.8 33.8 33.9 34.0 34.0 34.1 34.1 34.2 34.2 34.3 34.4 34.4 34.5 34.5 34.6 34.6 34.7 34.8 34.8 34.9 34.9 35.0 35.0 35.1 35.2 35.2 35.3 35.3 35.4 35.4 35.5 35.6 35.6 35.7 35.7 35.8 35.8 35.9 36.0 36.0 36.1 36.1 36.2 36.2 36.3 36.4 36.4 36.5 36.5 36.6 36.6 36.7 36.8 36.8 36.9 36.9 37.0 37.0 37.1 37.2 37.2 37.3 37.3 37.4 37.4 37.5 37.6 37.6 37.7 37.7 37.8 37.9 37.9 38.0 38.0 38.1 38.1 38.2 38.3 38.3 38.4 38.4 38.5 38.5 38.6 38.7 38.7 38.8 38.8 38.9 38.9 39.0 39.1 39.1 39.2 39.2 39.3 39.3 39.4 39.5 39.5 39.6 39.6 39.7 39.7 39.8 39.9 39.9 40.0 40.0 40.1 40.1 40.2 40.3 40.3 40.4 40.4 40.5 40.5 40.6 40.7 40.7 40.8 40.8 40.9 40.9 41.0 41.1 41.1 41.2 41.2 41.3 41.3 41.4 41.5 41.5 41.6 41.6 41.7 41.7 41.8 41.9 41.9 42.0 42.0 42.1 42.1 42.2 42.3 42.3 42.4 42.4 42.5 42.5 42.6 42.7 42.7 42.8 42.8 42.9 42.9 43.0 43.1 43.1 43.2 43.2 43.3 43.3 43.4 43.5 43.5 43.6 43.6 43.7 43.7 43.8 43.9 43.9 44.0 44.0 44.1 44.1 44.2 44.3 44.3 44.4 44.4 44.5 44.5 44.6 44.7 44.7 44.8 44.8 44.9 44.9 45.0 45.1 45.1 45.2 45.2 45.3 45.3 45.4 45.5 45.5 45.6 45.6 45.7 45.7 45.8 45.9 45.9 46.0 46.0 46.1 46.1 46.2 46.3 46.3 46.4 46.4 46.5 46.5 46.6 46.7 46.7 46.8 46.8 46.9 46.9 47.0 47.1 47.1 47.2 47.2 47.3 47.3 47.4 47.5 47.5 47.6 47.6 47.7 47.7 47.8 47.9 47.9 48.0 48.0 48.1 48.1 48.2 48.3 48.3 48.4 48.4 48.5 48.5 48.6 48.7 48.7 48.8 48.8 48.9 48.9 49.0 49.1 49.1 49.2 49.2 49.3 49.3 49.4 49.5 49.5 49.6 49.6 49.7 49.7 49.8 49.9 49.9 50.0 50.0 50.1 50.1 50.2 50.3 50.3 50.4 50.4 50.5 50.5 50.6 50.7 50.7 50.8 50.8 50.9 50.9 51.0 51.1 51.1 51.2 51.2 51.3 51.3 51.4 51.5 51.5 51.6 51.6 51.7 51.7 51.8 51.9 51.9 52.0 52.0 52.1 52.1 52.2 52.3 52.3 52.4 52.4 52.5 52.5 52.6 52.7 52.7 52.8 52.8 52.9 52.9 53.0 53.1 53.1 53.2 53.2 53.3 53.3 53.4 53.5 53.5 53.6 53.6 53.7 53.7 53.8 53.9 53.9 54.0 54.0 54.1 54.1 54.2 54.3 54.3 54.4 54.4 54.5 54.5 54.6 54.7 54.7 54.8 54.8 54.9 54.9 55.0 55.1 55.1 55.2 55.2 55.3 55.3 55.4 55.5 55.5 55.6 55.6 55.7 55.7 55.8 55.9 55.9 56.0 56.0 56.1 56.1 56.2 56.3 56.3 56.4 56.4 56.5 56.5 56.6 56.7 56.7 56.8 56.8 56.9 56.9 57.0 57.1 57.1 57.2 57.2 57.3 57.3 57.4 57.5 57.5 57.6 57.6 57.7 57.7 57.8 57.9 57.9 58.0 58.0 58.1 58.1 58.2 58.3 58.3 58.4 58.4 58.5 58.5 58.6 58.7 58.7 58.8 58.8 58.9 58.9 59.0 59.1 59.1 59.2 59.2 59.3 59.3 59.4 59.5 59.5 59.6 59.6 59.7 59.7 59.8 59.9 59.9 60.0 60.0 60.1 60.1 60.2 60.3 60.3 60.4 60.4 60.5 60.5 60.6 60.7 60.7 60.8 60.8 60.9 60.9 61.0 61.1 61.1 61.2 61.2 61.3 61.3 61.4 61.5 61.5 61.6 61.6 61.7 61.7 61.8 61.9 61.9 62.0 62.0 62.1 62.1 62.2 62.3 62.3 62.4 62.4 62.5 62.6 62.6 62.7 62.7 62.8 62.8 62.9 63.0 63.0 63.1 63.1 63.2 63.2 63.3 63.4 63.4 63.5 63.5 63.6 63.6 63.7 63.8 63.8 63.9 63.9 64.0 64.0 64.1 64.2 64.2 64.3 64.3 64.4 64.4 64.5 64.6 64.6 64.7 64.7 64.8 64.8 64.9 65.0 65.0 65.1 65.1 65.2 65.2 65.3 65.4 65.4 65.5 65.5 65.6 65.6 65.7 65.8 65.8 65.9 65.9 66.0 66.0 66.1 66.2 66.2 66.3 66.3 66.4 66.4 66.5 66.6 66.6 66.7 66.7 66.8 66.8 66.9 67.0 67.0 67.1 67.1 67.2 67.2 67.3 67.4 67.4 67.5 67.5 67.6 67.6 67.7 67.8 67.8 67.9 67.9 68.0 68.0 68.1 68.2 68.2 68.3 68.3 68.4 68.4 68.5 68.6 68.6 68.7 68.7 68.8 68.8 68.9 69.0 69.0 69.1 69.1 69.2 69.2 69.3 69.4 69.4 69.5 69.5 69.6 69.6 69.7 69.8 69.8 69.9 69.9 70.0 70.0 70.1 70.2 70.2 70.3 70.3 70.4 70.4 70.5 70.6 70.6 70.7 70.7 70.8 70.8 70.9 71.0 71.0 71.1 71.1 71.2 71.2 71.3 71.4 71.4 71.5 71.5 71.6 71.6 71.7 71.8 71.8 71.9 71.9 72.0 72.0 72.1 72.2 72.2 72.3 72.3 72.4 72.4 72.5 72.6 72.6 72.7 72.7 72.8 72.8 72.9 73.0 73.0 73.1 73.1 73.2 73.2 73.3 73.4 73.4 73.5 73.5 73.6 73.6 73.7 73.8 73.8 73.9 73.9 74.0 74.0 74.1 74.2 74.2 74.3 74.3 74.4 74.4 74.5 74.6 74.6 74.7 74.7 74.8 74.8 74.9 75.0 75.0 75.1 75.1 75.2 75.2 75.3 75.4 75.4 75.5 75.5 75.6 75.6 75.7 75.8 75.8 75.9 75.9 76.0 76.0 76.1 76.2 76.2 76.3 76.3 76.4 76.4 76.5 76.6 76.6 76.7 76.7 76.8 76.8 76.9 77.0 77.0 77.1 77.1 77.2 77.2 77.3 77.4 77.4 77.5 77.5 77.6 77.6 77.7 77.8 77.8 77.9 77.9 78.0 78.0 78.1 78.2 78.2 78.3 78.3 78.4 78.4 78.5 78.6 78.6 78.7 78.7 78.8 78.8 78.9 79.0 79.0 79.1 79.1 79.2 79.2 79.3 79.4 79.4 79.5 79.5 79.6 79.6 79.7 79.8 79.8 79.9 79.9 80.0 80.0 80.1 80.2 80.2 80.3 80.3 80.4 80.4 80.5 80.6 80.6 80.7 80.7 80.8 80.8 80.9 81.0 81.0 81.1 81.1 81.2 81.2 81.3 81.4 81.4 81.5 81.5 81.6 81.6 81.7 81.8 81.8 81.9 81.9 82.0 82.0 82.1 82.2 82.2 82.3 82.3 82.4 82.4 82.5 82.6 82.6 82.7 82.7 82.8 82.8 82.9 83.0 83.0 83.1 83.1 83.2 83.2 83.3 83.4 83.4 83.5 83.5 83.6 83.6 83.7 83.8 83.8 83.9 83.9 84.0 84.0 84.1 84.2 84.2 84.3 84.3 84.4 84.4 84.5 84.6 84.6 84.7 84.7 84.8 84.8 84.9 85.0 85.0 85.1 85.1 85.2 85.2 85.3 85.4 85.4 85.5 85.5 85.6 85.6 85.7 85.8 85.8 85.9 85.9 86.0 86.0 86.1 86.2 86.2 86.3 86.3 86.4 86.4 86.5 86.6 86.6 86.7 86.7 86.8 86.8 86.9 87.0 87.0 87.1 87.1 87.2 87.2 87.3 87.4 87.4 87.5 87.5 87.6 87.7 87.7 87.8 87.8 87.9 87.9 88.0 88.1 88.1 88.2 88.2 88.3 88.3 88.4 88.5 88.5 88.6 88.6 88.7 88.7 88.8 88.9 88.9 89.0 89.0 89.1 89.1 89.2 89.3 89.3 89.4 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.8 89.9 89.9 90.0 90.1 90.1 90.2 90.2 90.3 90.3 90.4 90.5 90.5 90.6 90.6 90.7 90.7 90.8 90.9 90.9 91.0 91.0 91.1 91.1 91.2 91.3 91.3 91.4 91.4 91.5 91.5 91.6 91.7 91.7 91.8 91.8 91.9 91.9 92.0 92.1 92.1 92.2 92.2 92.3 92.3 92.4 92.5 92.5 92.6 92.6 92.7 92.7 92.8 92.9 92.9 93.0 93.0 93.1 93.1 93.2 93.3 93.3 93.4 93.4 93.5 93.5 93.6 93.7 93.7 93.8 93.8 93.9 93.9 94.0 94.1 94.1 94.2 94.2 94.3 94.3 94.4 94.5 94.5 94.6 94.6 94.7 94.7 94.8 94.9 94.9 95.0 95.0 95.1 95.1 95.2 95.3 95.3 95.4 95.4 95.5 95.5 95.6 95.7 95.7 95.8 95.8 95.9 95.9 96.0 96.1 96.1 96.2 96.2 96.3 96.3 96.4 96.5 96.5 96.6 96.6 96.7 96.7 96.8 96.9 96.9 97.0 97.0 97.1 97.1 97.2 97.3 97.3 97.4 97.4 97.5 97.5 97.6 97.7 97.7 97.8 97.8 97.9 97.9 98.0 98.1 98.1 98.2 98.2 98.3 98.3 98.4 98.5 98.5 98.6 98.6 98.7 98.7 98.8 98.9 98.9 99.0 99.0 99.1 99.1 99.2 99.3 99.3 99.4 99.4 99.5 99.5 99.6 99.7 99.7 99.8 99.8 99.9 99.9 -found 64 predictions from path traversal Error with prediction: snap lend_intergenic: 21009, rend_intergenic: 10132 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 26451, rend_intergenic: 21401 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28309, rend_intergenic: 27001 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29741, rend_intergenic: 28456 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42967, rend_intergenic: 30333 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49004, rend_intergenic: 43531 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75648, rend_intergenic: 49662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90877, rend_intergenic: 81906 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97494, rend_intergenic: 96513 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 110041, rend_intergenic: 98275 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115922, rend_intergenic: 110702 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142696, rend_intergenic: 120932 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152064, rend_intergenic: 148127 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179147, rend_intergenic: 163079 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185545, rend_intergenic: 180350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189258, rend_intergenic: 185546 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189435, rend_intergenic: 189274 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 214120, rend_intergenic: 210654 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215734, rend_intergenic: 214599 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228833, rend_intergenic: 216869 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229589, rend_intergenic: 228870 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 233023, rend_intergenic: 229661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 239998, rend_intergenic: 236790 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 246832, rend_intergenic: 244021 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 257615, rend_intergenic: 255388 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 285204, rend_intergenic: 260696 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291253, rend_intergenic: 285565 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 300328, rend_intergenic: 291914 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 310866, rend_intergenic: 305058 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 319397, rend_intergenic: 311157 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 321334, rend_intergenic: 320129 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 322676, rend_intergenic: 322031 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 325163, rend_intergenic: 323484 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 331264, rend_intergenic: 326918 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 340244, rend_intergenic: 331284 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 10025 -exon list size: 2 building trellis 25.0 50.0 75.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support