-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_24/scaffold_24_1422671-1796581 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.92703_t Valid prediction for GeneMark_model.92732_t Valid prediction for GeneMark_model.92819_t Valid prediction for GeneMark_model.92696_t Valid prediction for snap_scaffold_24-snap.349-T1 Valid prediction for GeneMark_model.92705_t Valid prediction for snap_scaffold_24-snap.393-T1 Valid prediction for GeneMark_model.92773_t Valid prediction for GlimmerHMM_glimmerT_53308-T1 Valid prediction for Augustus_model.g35701.t1 Valid prediction for GeneMark_model.92744_t Valid prediction for snap_scaffold_24-snap.400-T1 Valid prediction for snap_scaffold_24-snap.356-T1 Valid prediction for GlimmerHMM_glimmerT_53311-T1 Valid prediction for GeneMark_model.92704_t Valid prediction for Augustus_model.g35722.t1 Valid prediction for GeneMark_model.92716_t Valid prediction for GeneMark_model.92738_t Valid prediction for snap_scaffold_24-snap.398-T1 Valid prediction for Augustus_model.g35715.t1 Valid prediction for GlimmerHMM_glimmerT_53297-T1 Valid prediction for GeneMark_model.92700_t Valid prediction for snap_scaffold_24-snap.419-T1 Valid prediction for GeneMark_model.92771_t Valid prediction for GlimmerHMM_glimmerT_53329-T1 Valid prediction for GlimmerHMM_glimmerT_53281-T1 Valid prediction for GeneMark_model.92726_t Valid prediction for snap_scaffold_24-snap.414-T1 Valid prediction for GlimmerHMM_glimmerT_53322-T1 Valid prediction for GeneMark_model.92713_t Valid prediction for GlimmerHMM_glimmerT_53316-T1 Valid prediction for GlimmerHMM_glimmerT_53330-T1 Valid prediction for GeneMark_model.92792_t Valid prediction for snap_scaffold_24-snap.362-T1 Valid prediction for pasa_asmbl_32086.p1 Valid prediction for snap_scaffold_24-snap.413-T1 Valid prediction for GeneMark_model.92752_t Valid prediction for snap_scaffold_24-snap.412-T1 Valid prediction for GeneMark_model.92757_t Valid prediction for snap_scaffold_24-snap.402-T1 Valid prediction for Augustus_model.g35723.t1 Valid prediction for snap_scaffold_24-snap.388-T1 Valid prediction for snap_scaffold_24-snap.384-T1 Valid prediction for GeneMark_model.92782_t Valid prediction for GlimmerHMM_glimmerT_53307-T1 Valid prediction for GeneMark_model.92800_t Valid prediction for GeneMark_model.92806_t Valid prediction for GeneMark_model.92778_t Valid prediction for snap_scaffold_24-snap.421-T1 Valid prediction for Augustus_model.g35718.t1 Valid prediction for snap_scaffold_24-snap.391-T1 Valid prediction for snap_scaffold_24-snap.358-T1 Valid prediction for GeneMark_model.92776_t Valid prediction for GeneMark_model.92789_t Valid prediction for GeneMark_model.92821_t Valid prediction for GlimmerHMM_glimmerT_53320-T1 Valid prediction for GeneMark_model.92709_t Valid prediction for snap_scaffold_24-snap.380-T1 Valid prediction for GeneMark_model.92768_t Valid prediction for snap_scaffold_24-snap.394-T1 Valid prediction for GlimmerHMM_glimmerT_53285-T1 Valid prediction for GlimmerHMM_glimmerT_53291-T1 Valid prediction for Augustus_model.g35699.t1 Valid prediction for snap_scaffold_24-snap.355-T1 Valid prediction for GeneMark_model.92733_t Valid prediction for GlimmerHMM_glimmerT_53312-T1 Valid prediction for snap_scaffold_24-snap.420-T1 Valid prediction for GeneMark_model.92718_t Valid prediction for GlimmerHMM_glimmerT_53299-T1 Valid prediction for GlimmerHMM_glimmerT_53289-T1 Valid prediction for GlimmerHMM_glimmerT_53287-T1 Valid prediction for GlimmerHMM_glimmerT_53315-T1 Valid prediction for snap_scaffold_24-snap.386-T1 Valid prediction for GeneMark_model.92736_t Valid prediction for GlimmerHMM_glimmerT_53294-T1 Valid prediction for GeneMark_model.92780_t Valid prediction for GeneMark_model.92809_t Valid prediction for snap_scaffold_24-snap.351-T1 Valid prediction for GeneMark_model.92741_t Valid prediction for GeneMark_model.92766_t Valid prediction for Augustus_model.g35721.t1 Valid prediction for GeneMark_model.92746_t Valid prediction for GeneMark_model.92702_t Valid prediction for snap_scaffold_24-snap.375-T1 Valid prediction for GeneMark_model.92759_t Valid prediction for GeneMark_model.92816_t Valid prediction for GlimmerHMM_glimmerT_53314-T1 Valid prediction for snap_scaffold_24-snap.361-T1 Valid prediction for snap_scaffold_24-snap.416-T1 Couldn't classify 20770, 21011 Sorry, prediction pasa_asmbl_32084.p1 fails validation. (ATG) AC 17438-17563 GT AGG (CTT) AG 18148-18213 GT AGG (GAT) AG 19197-19281 GT AGG (CCA) AG 19608-19664 GT GGG (CAT) AG 20770-21011 AA GGA -recovered pasa_asmbl_32084.p1, initial, 17438, 17563 -recovered pasa_asmbl_32084.p1, internal, 18148, 18213 -recovered pasa_asmbl_32084.p1, internal, 19197, 19281 -recovered pasa_asmbl_32084.p1, internal, 19608, 19664 Valid prediction for GeneMark_model.92796_t Valid prediction for GeneMark_model.92763_t Valid prediction for GeneMark_model.92769_t Valid prediction for GeneMark_model.92719_t Valid prediction for GeneMark_model.92810_t Valid prediction for GeneMark_model.92711_t Valid prediction for Augustus_model.g35702.t1 Valid prediction for GeneMark_model.92698_t Valid prediction for GeneMark_model.92804_t Valid prediction for HiQ_model.g35703.t1 Valid prediction for snap_scaffold_24-snap.374-T1 Valid prediction for GeneMark_model.92707_t Valid prediction for GeneMark_model.92797_t Valid prediction for GlimmerHMM_glimmerT_53284-T1 Valid prediction for snap_scaffold_24-snap.377-T1 Valid prediction for GeneMark_model.92764_t Valid prediction for GeneMark_model.92748_t Valid prediction for snap_scaffold_24-snap.390-T1 Valid prediction for GeneMark_model.92754_t Valid prediction for snap_scaffold_24-snap.353-T1 Valid prediction for GeneMark_model.92761_t Valid prediction for GeneMark_model.92730_t Valid prediction for GeneMark_model.92750_t Valid prediction for snap_scaffold_24-snap.383-T1 Valid prediction for GeneMark_model.92812_t Valid prediction for GeneMark_model.92814_t Valid prediction for GlimmerHMM_glimmerT_53306-T1 Valid prediction for GlimmerHMM_glimmerT_53327-T1 Valid prediction for GeneMark_model.92739_t Valid prediction for GlimmerHMM_glimmerT_53323-T1 Valid prediction for GeneMark_model.92694_t Valid prediction for GlimmerHMM_glimmerT_53309-T1 Valid prediction for GlimmerHMM_glimmerT_53331-T1 Valid prediction for GeneMark_model.92728_t Valid prediction for GeneMark_model.92823_t Valid prediction for GeneMark_model.92785_t Valid prediction for snap_scaffold_24-snap.364-T1 Valid prediction for snap_scaffold_24-snap.371-T1 Valid prediction for snap_scaffold_24-snap.381-T1 Valid prediction for snap_scaffold_24-snap.368-T1 Valid prediction for Augustus_model.g35720.t1 Valid prediction for GlimmerHMM_glimmerT_53325-T1 Valid prediction for snap_scaffold_24-snap.397-T1 Valid prediction for snap_scaffold_24-snap.369-T1 Valid prediction for snap_scaffold_24-snap.366-T1 Valid prediction for GlimmerHMM_glimmerT_53333-T1 Valid prediction for snap_scaffold_24-snap.382-T1 Valid prediction for snap_scaffold_24-snap.360-T1 Valid prediction for GeneMark_model.92790_t Valid prediction for GeneMark_model.92723_t Valid prediction for GlimmerHMM_glimmerT_53283-T1 Valid prediction for GeneMark_model.92825_t Valid prediction for snap_scaffold_24-snap.404-T1 Valid prediction for GeneMark_model.92724_t Valid prediction for GeneMark_model.92794_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.92740_t Valid prediction for snap_scaffold_24-snap.354-T1 Valid prediction for GeneMark_model.92721_t Valid prediction for GlimmerHMM_glimmerT_53303-T1 Valid prediction for GlimmerHMM_glimmerT_53293-T1 Valid prediction for GeneMark_model.92801_t Valid prediction for HiQ_model.g35698.t1 Couldn't classify 273119, 273299 Sorry, prediction pasa_asmbl_32725.p1 fails validation. (GAG) AG 273119-273299 GT AGG (AGT) AG 273640-273836 TC AGT -recovered pasa_asmbl_32725.p1, terminal, 273640, 273836 -recovered pasa_asmbl_32725.p1, internal, 273119, 273299 Valid prediction for GlimmerHMM_glimmerT_53290-T1 Valid prediction for GeneMark_model.92791_t Valid prediction for Augustus_model.g35716.t1 Valid prediction for GeneMark_model.92827_t Valid prediction for GeneMark_model.92808_t Valid prediction for GlimmerHMM_glimmerT_53292-T1 Valid prediction for GeneMark_model.92753_t Valid prediction for GeneMark_model.92811_t Valid prediction for snap_scaffold_24-snap.379-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GeneMark_model.92802_t Valid prediction for snap_scaffold_24-snap.406-T1 Valid prediction for snap_scaffold_24-snap.373-T1 Valid prediction for snap_scaffold_24-snap.370-T1 Valid prediction for GlimmerHMM_glimmerT_53335-T1 Valid prediction for GeneMark_model.92765_t Valid prediction for snap_scaffold_24-snap.409-T1 Valid prediction for GlimmerHMM_glimmerT_53318-T1 Valid prediction for snap_scaffold_24-snap.372-T1 Valid prediction for GeneMark_model.92807_t Valid prediction for Augustus_model.g35712.t1 Valid prediction for snap_scaffold_24-snap.399-T1 Valid prediction for pasa_asmbl_32722.p2 Valid prediction for GeneMark_model.92715_t Valid prediction for snap_scaffold_24-snap.350-T1 Valid prediction for Augustus_model.g35705.t1 Valid prediction for GeneMark_model.92755_t Couldn't classify 339435, 339514 Couldn't classify 342281, 342445 Sorry, prediction pasa_asmbl_32723.p1 fails validation. (GCC) CC 339435-339514 GT AGG (GTT) AG 341868-341961 GT TAG (GAG) AG 342281-342445 TC GCT -recovered pasa_asmbl_32723.p1, internal, 341868, 341961 Valid prediction for snap_scaffold_24-snap.392-T1 Valid prediction for GlimmerHMM_glimmerT_53301-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GeneMark_model.92760_t Valid prediction for snap_scaffold_24-snap.415-T1 Valid prediction for GeneMark_model.92777_t Valid prediction for GeneMark_model.92784_t Valid prediction for snap_scaffold_24-snap.387-T1 Valid prediction for snap_scaffold_24-snap.378-T1 Valid prediction for GlimmerHMM_glimmerT_53326-T1 Valid prediction for snap_scaffold_24-snap.422-T1 Valid prediction for Augustus_model.g35711.t1 Valid prediction for GeneMark_model.92725_t Valid prediction for GlimmerHMM_glimmerT_53304-T1 Valid prediction for snap_scaffold_24-snap.365-T1 Valid prediction for GeneMark_model.92826_t Valid prediction for GeneMark_model.92710_t Valid prediction for GlimmerHMM_glimmerT_53319-T1 Valid prediction for GeneMark_model.92699_t Valid prediction for Augustus_model.g35710.t1 Valid prediction for GeneMark_model.92701_t Valid prediction for GeneMark_model.92818_t Valid prediction for GeneMark_model.92805_t Valid prediction for CodingQuarry_transcript_37167-T1 Valid prediction for snap_scaffold_24-snap.352-T1 Valid prediction for Augustus_model.g35714.t1 Valid prediction for snap_scaffold_24-snap.401-T1 Valid prediction for GeneMark_model.92793_t Valid prediction for snap_scaffold_24-snap.410-T1 Valid prediction for GeneMark_model.92697_t Valid prediction for GlimmerHMM_glimmerT_53282-T1 Valid prediction for Augustus_model.g35706.t1 Valid prediction for GeneMark_model.92695_t Valid prediction for CodingQuarry_transcript_37169-T1 Valid prediction for snap_scaffold_24-snap.385-T1 Valid prediction for GlimmerHMM_glimmerT_53295-T1 Valid prediction for snap_scaffold_24-snap.359-T1 Valid prediction for GlimmerHMM_glimmerT_53310-T1 Valid prediction for GlimmerHMM_glimmerT_53336-T1 Valid prediction for GeneMark_model.92731_t Valid prediction for Augustus_model.g35708.t1 Valid prediction for GlimmerHMM_glimmerT_53324-T1 Valid prediction for CodingQuarry_transcript_37168-T1 Valid prediction for Augustus_model.g35724.t1 Valid prediction for GlimmerHMM_glimmerT_53313-T1 Valid prediction for GlimmerHMM_glimmerT_53305-T1 Valid prediction for snap_scaffold_24-snap.347-T1 Valid prediction for snap_scaffold_24-snap.348-T1 Valid prediction for GeneMark_model.92813_t Valid prediction for GlimmerHMM_glimmerT_53288-T1 Valid prediction for GeneMark_model.92735_t Valid prediction for GeneMark_model.92734_t Valid prediction for GeneMark_model.92756_t Valid prediction for snap_scaffold_24-snap.376-T1 Valid prediction for GeneMark_model.92817_t Valid prediction for GlimmerHMM_glimmerT_53332-T1 Valid prediction for Augustus_model.g35709.t1 Valid prediction for snap_scaffold_24-snap.363-T1 Valid prediction for Augustus_model.g35725.t1 Valid prediction for GlimmerHMM_glimmerT_53296-T1 Valid prediction for snap_scaffold_24-snap.367-T1 Valid prediction for GeneMark_model.92779_t Valid prediction for GeneMark_model.92820_t Valid prediction for GeneMark_model.92824_t Valid prediction for GeneMark_model.92762_t Valid prediction for GlimmerHMM_glimmerT_53328-T1 Valid prediction for GlimmerHMM_glimmerT_53300-T1 Valid prediction for Augustus_model.g35704.t1 Valid prediction for snap_scaffold_24-snap.411-T1 Valid prediction for snap_scaffold_24-snap.389-T1 Valid prediction for Augustus_model.g35719.t1 Valid prediction for snap_scaffold_24-snap.408-T1 Valid prediction for GeneMark_model.92717_t Valid prediction for GeneMark_model.92714_t Valid prediction for GeneMark_model.92749_t Valid prediction for snap_scaffold_24-snap.407-T1 Valid prediction for GeneMark_model.92743_t Valid prediction for pasa_asmbl_32719.p1 Valid prediction for GlimmerHMM_glimmerT_53321-T1 Valid prediction for GeneMark_model.92772_t Valid prediction for snap_scaffold_24-snap.403-T1 Valid prediction for GeneMark_model.92729_t Valid prediction for GlimmerHMM_glimmerT_53334-T1 Valid prediction for snap_scaffold_24-snap.418-T1 Valid prediction for GeneMark_model.92781_t Valid prediction for GeneMark_model.92822_t Valid prediction for GeneMark_model.92712_t Valid prediction for snap_scaffold_24-snap.357-T1 Valid prediction for Augustus_model.g35713.t1 Valid prediction for GeneMark_model.92799_t Valid prediction for snap_scaffold_24-snap.417-T1 Valid prediction for GlimmerHMM_glimmerT_53286-T1 Valid prediction for GeneMark_model.92774_t Valid prediction for GeneMark_model.92795_t Valid prediction for GeneMark_model.92803_t Valid prediction for GeneMark_model.92815_t Valid prediction for GeneMark_model.92706_t Valid prediction for Augustus_model.g35707.t1 Valid prediction for GeneMark_model.92788_t Valid prediction for GeneMark_model.92770_t Valid prediction for GeneMark_model.92708_t Valid prediction for GlimmerHMM_glimmerT_53298-T1 Valid prediction for snap_scaffold_24-snap.405-T1 Valid prediction for GeneMark_model.92798_t Valid prediction for GeneMark_model.92745_t Valid prediction for GeneMark_model.92720_t Valid prediction for GlimmerHMM_glimmerT_53317-T1 Valid prediction for GeneMark_model.92722_t Valid prediction for GeneMark_model.92786_t Valid prediction for GeneMark_model.92727_t Valid prediction for snap_scaffold_24-snap.395-T1 Valid prediction for GeneMark_model.92737_t Valid prediction for GeneMark_model.92758_t Valid prediction for GeneMark_model.92751_t Valid prediction for snap_scaffold_24-snap.396-T1 Valid prediction for GeneMark_model.92742_t Valid prediction for Augustus_model.g35717.t1 Valid prediction for GeneMark_model.92767_t Valid prediction for GlimmerHMM_glimmerT_53302-T1 Valid prediction for HiQ_model.g35700.t1 Valid prediction for GeneMark_model.92747_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8087, rend_intergenic: 3731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24339, rend_intergenic: 20821 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28424, rend_intergenic: 28029 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40247, rend_intergenic: 28525 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41683, rend_intergenic: 40294 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43572, rend_intergenic: 41789 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53030, rend_intergenic: 45036 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53327, rend_intergenic: 53100 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56241, rend_intergenic: 53699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60463, rend_intergenic: 56317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66625, rend_intergenic: 62215 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90382, rend_intergenic: 67221 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94607, rend_intergenic: 91407 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107176, rend_intergenic: 100443 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138937, rend_intergenic: 116348 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 204981, rend_intergenic: 139896 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 211164, rend_intergenic: 205363 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 211487, rend_intergenic: 211244 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213567, rend_intergenic: 211646 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215487, rend_intergenic: 213885 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 217580, rend_intergenic: 215695 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 235341, rend_intergenic: 218218 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242120, rend_intergenic: 236773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252426, rend_intergenic: 250974 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 262461, rend_intergenic: 252925 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270390, rend_intergenic: 263865 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 279424, rend_intergenic: 272378 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281023, rend_intergenic: 279750 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 282738, rend_intergenic: 281224 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 302155, rend_intergenic: 282998 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 324130, rend_intergenic: 302906 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 335437, rend_intergenic: 333889 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 345003, rend_intergenic: 335440 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 346693, rend_intergenic: 345105 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 373911 -exon list size: 1890 building trellis 0.1 0.1 0.2 0.2 0.3 0.3 0.4 0.4 0.5 0.5 0.6 0.6 0.7 0.7 0.8 0.8 0.9 1.0 1.0 1.1 1.1 1.2 1.2 1.3 1.3 1.4 1.4 1.5 1.5 1.6 1.6 1.7 1.7 1.8 1.8 1.9 2.0 2.0 2.1 2.1 2.2 2.2 2.3 2.3 2.4 2.4 2.5 2.5 2.6 2.6 2.7 2.7 2.8 2.9 2.9 3.0 3.0 3.1 3.1 3.2 3.2 3.3 3.3 3.4 3.4 3.5 3.5 3.6 3.6 3.7 3.8 3.8 3.9 3.9 4.0 4.0 4.1 4.1 4.2 4.2 4.3 4.3 4.4 4.4 4.5 4.5 4.6 4.7 4.7 4.8 4.8 4.9 4.9 5.0 5.0 5.1 5.1 5.2 5.2 5.3 5.3 5.4 5.4 5.5 5.5 5.6 5.7 5.7 5.8 5.8 5.9 5.9 6.0 6.0 6.1 6.1 6.2 6.2 6.3 6.3 6.4 6.4 6.5 6.6 6.6 6.7 6.7 6.8 6.8 6.9 6.9 7.0 7.0 7.1 7.1 7.2 7.2 7.3 7.3 7.4 7.5 7.5 7.6 7.6 7.7 7.7 7.8 7.8 7.9 7.9 8.0 8.0 8.1 8.1 8.2 8.2 8.3 8.4 8.4 8.5 8.5 8.6 8.6 8.7 8.7 8.8 8.8 8.9 8.9 9.0 9.0 9.1 9.1 9.2 9.2 9.3 9.4 9.4 9.5 9.5 9.6 9.6 9.7 9.7 9.8 9.8 9.9 9.9 10.0 10.0 10.1 10.1 10.2 10.3 10.3 10.4 10.4 10.5 10.5 10.6 10.6 10.7 10.7 10.8 10.8 10.9 10.9 11.0 11.0 11.1 11.2 11.2 11.3 11.3 11.4 11.4 11.5 11.5 11.6 11.6 11.7 11.7 11.8 11.8 11.9 11.9 12.0 12.1 12.1 12.2 12.2 12.3 12.3 12.4 12.4 12.5 12.5 12.6 12.6 12.7 12.7 12.8 12.8 12.9 12.9 13.0 13.1 13.1 13.2 13.2 13.3 13.3 13.4 13.4 13.5 13.5 13.6 13.6 13.7 13.7 13.8 13.8 13.9 14.0 14.0 14.1 14.1 14.2 14.2 14.3 14.3 14.4 14.4 14.5 14.5 14.6 14.6 14.7 14.7 14.8 14.9 14.9 15.0 15.0 15.1 15.1 15.2 15.2 15.3 15.3 15.4 15.4 15.5 15.5 15.6 15.6 15.7 15.8 15.8 15.9 15.9 16.0 16.0 16.1 16.1 16.2 16.2 16.3 16.3 16.4 16.4 16.5 16.5 16.6 16.6 16.7 16.8 16.8 16.9 16.9 17.0 17.0 17.1 17.1 17.2 17.2 17.3 17.3 17.4 17.4 17.5 17.5 17.6 17.7 17.7 17.8 17.8 17.9 17.9 18.0 18.0 18.1 18.1 18.2 18.2 18.3 18.3 18.4 18.4 18.5 18.6 18.6 18.7 18.7 18.8 18.8 18.9 18.9 19.0 19.0 19.1 19.1 19.2 19.2 19.3 19.3 19.4 19.5 19.5 19.6 19.6 19.7 19.7 19.8 19.8 19.9 19.9 20.0 20.0 20.1 20.1 20.2 20.2 20.3 20.3 20.4 20.5 20.5 20.6 20.6 20.7 20.7 20.8 20.8 20.9 20.9 21.0 21.0 21.1 21.1 21.2 21.2 21.3 21.4 21.4 21.5 21.5 21.6 21.6 21.7 21.7 21.8 21.8 21.9 21.9 22.0 22.0 22.1 22.1 22.2 22.3 22.3 22.4 22.4 22.5 22.5 22.6 22.6 22.7 22.7 22.8 22.8 22.9 22.9 23.0 23.0 23.1 23.2 23.2 23.3 23.3 23.4 23.4 23.5 23.5 23.6 23.6 23.7 23.7 23.8 23.8 23.9 23.9 24.0 24.0 24.1 24.2 24.2 24.3 24.3 24.4 24.4 24.5 24.5 24.6 24.6 24.7 24.7 24.8 24.8 24.9 24.9 25.0 25.1 25.1 25.2 25.2 25.3 25.3 25.4 25.4 25.5 25.5 25.6 25.6 25.7 25.7 25.8 25.8 25.9 26.0 26.0 26.1 26.1 26.2 26.2 26.3 26.3 26.4 26.4 26.5 26.5 26.6 26.6 26.7 26.7 26.8 26.8 26.9 27.0 27.0 27.1 27.1 27.2 27.2 27.3 27.3 27.4 27.4 27.5 27.5 27.6 27.6 27.7 27.7 27.8 27.9 27.9 28.0 28.0 28.1 28.1 28.2 28.2 28.3 28.3 28.4 28.4 28.5 28.5 28.6 28.6 28.7 28.8 28.8 28.9 28.9 29.0 29.0 29.1 29.1 29.2 29.2 29.3 29.3 29.4 29.4 29.5 29.5 29.6 29.7 29.7 29.8 29.8 29.9 29.9 30.0 30.0 30.1 30.1 30.2 30.2 30.3 30.3 30.4 30.4 30.5 30.5 30.6 30.7 30.7 30.8 30.8 30.9 30.9 31.0 31.0 31.1 31.1 31.2 31.2 31.3 31.3 31.4 31.4 31.5 31.6 31.6 31.7 31.7 31.8 31.8 31.9 31.9 32.0 32.0 32.1 32.1 32.2 32.2 32.3 32.3 32.4 32.5 32.5 32.6 32.6 32.7 32.7 32.8 32.8 32.9 32.9 33.0 33.0 33.1 33.1 33.2 33.2 33.3 33.4 33.4 33.5 33.5 33.6 33.6 33.7 33.7 33.8 33.8 33.9 33.9 34.0 34.0 34.1 34.1 34.2 34.2 34.3 34.4 34.4 34.5 34.5 34.6 34.6 34.7 34.7 34.8 34.8 34.9 34.9 35.0 35.0 35.1 35.1 35.2 35.3 35.3 35.4 35.4 35.5 35.5 35.6 35.6 35.7 35.7 35.8 35.8 35.9 35.9 36.0 36.0 36.1 36.2 36.2 36.3 36.3 36.4 36.4 36.5 36.5 36.6 36.6 36.7 36.7 36.8 36.8 36.9 36.9 37.0 37.1 37.1 37.2 37.2 37.3 37.3 37.4 37.4 37.5 37.5 37.6 37.6 37.7 37.7 37.8 37.8 37.9 37.9 38.0 38.1 38.1 38.2 38.2 38.3 38.3 38.4 38.4 38.5 38.5 38.6 38.6 38.7 38.7 38.8 38.8 38.9 39.0 39.0 39.1 39.1 39.2 39.2 39.3 39.3 39.4 39.4 39.5 39.5 39.6 39.6 39.7 39.7 39.8 39.9 39.9 40.0 40.0 40.1 40.1 40.2 40.2 40.3 40.3 40.4 40.4 40.5 40.5 40.6 40.6 40.7 40.8 40.8 40.9 40.9 41.0 41.0 41.1 41.1 41.2 41.2 41.3 41.3 41.4 41.4 41.5 41.5 41.6 41.6 41.7 41.8 41.8 41.9 41.9 42.0 42.0 42.1 42.1 42.2 42.2 42.3 42.3 42.4 42.4 42.5 42.5 42.6 42.7 42.7 42.8 42.8 42.9 42.9 43.0 43.0 43.1 43.1 43.2 43.2 43.3 43.3 43.4 43.4 43.5 43.6 43.6 43.7 43.7 43.8 43.8 43.9 43.9 44.0 44.0 44.1 44.1 44.2 44.2 44.3 44.3 44.4 44.5 44.5 44.6 44.6 44.7 44.7 44.8 44.8 44.9 44.9 45.0 45.0 45.1 45.1 45.2 45.2 45.3 45.3 45.4 45.5 45.5 45.6 45.6 45.7 45.7 45.8 45.8 45.9 45.9 46.0 46.0 46.1 46.1 46.2 46.2 46.3 46.4 46.4 46.5 46.5 46.6 46.6 46.7 46.7 46.8 46.8 46.9 46.9 47.0 47.0 47.1 47.1 47.2 47.3 47.3 47.4 47.4 47.5 47.5 47.6 47.6 47.7 47.7 47.8 47.8 47.9 47.9 48.0 48.0 48.1 48.2 48.2 48.3 48.3 48.4 48.4 48.5 48.5 48.6 48.6 48.7 48.7 48.8 48.8 48.9 48.9 49.0 49.0 49.1 49.2 49.2 49.3 49.3 49.4 49.4 49.5 49.5 49.6 49.6 49.7 49.7 49.8 49.8 49.9 49.9 50.0 50.1 50.1 50.2 50.2 50.3 50.3 50.4 50.4 50.5 50.5 50.6 50.6 50.7 50.7 50.8 50.8 50.9 51.0 51.0 51.1 51.1 51.2 51.2 51.3 51.3 51.4 51.4 51.5 51.5 51.6 51.6 51.7 51.7 51.8 51.8 51.9 52.0 52.0 52.1 52.1 52.2 52.2 52.3 52.3 52.4 52.4 52.5 52.5 52.6 52.6 52.7 52.7 52.8 52.9 52.9 53.0 53.0 53.1 53.1 53.2 53.2 53.3 53.3 53.4 53.4 53.5 53.5 53.6 53.6 53.7 53.8 53.8 53.9 53.9 54.0 54.0 54.1 54.1 54.2 54.2 54.3 54.3 54.4 54.4 54.5 54.5 54.6 54.7 54.7 54.8 54.8 54.9 54.9 55.0 55.0 55.1 55.1 55.2 55.2 55.3 55.3 55.4 55.4 55.5 55.5 55.6 55.7 55.7 55.8 55.8 55.9 55.9 56.0 56.0 56.1 56.1 56.2 56.2 56.3 56.3 56.4 56.4 56.5 56.6 56.6 56.7 56.7 56.8 56.8 56.9 56.9 57.0 57.0 57.1 57.1 57.2 57.2 57.3 57.3 57.4 57.5 57.5 57.6 57.6 57.7 57.7 57.8 57.8 57.9 57.9 58.0 58.0 58.1 58.1 58.2 58.2 58.3 58.4 58.4 58.5 58.5 58.6 58.6 58.7 58.7 58.8 58.8 58.9 58.9 59.0 59.0 59.1 59.1 59.2 59.2 59.3 59.4 59.4 59.5 59.5 59.6 59.6 59.7 59.7 59.8 59.8 59.9 59.9 60.0 60.0 60.1 60.1 60.2 60.3 60.3 60.4 60.4 60.5 60.5 60.6 60.6 60.7 60.7 60.8 60.8 60.9 60.9 61.0 61.0 61.1 61.2 61.2 61.3 61.3 61.4 61.4 61.5 61.5 61.6 61.6 61.7 61.7 61.8 61.8 61.9 61.9 62.0 62.1 62.1 62.2 62.2 62.3 62.3 62.4 62.4 62.5 62.5 62.6 62.6 62.7 62.7 62.8 62.8 62.9 62.9 63.0 63.1 63.1 63.2 63.2 63.3 63.3 63.4 63.4 63.5 63.5 63.6 63.6 63.7 63.7 63.8 63.8 63.9 64.0 64.0 64.1 64.1 64.2 64.2 64.3 64.3 64.4 64.4 64.5 64.5 64.6 64.6 64.7 64.7 64.8 64.9 64.9 65.0 65.0 65.1 65.1 65.2 65.2 65.3 65.3 65.4 65.4 65.5 65.5 65.6 65.6 65.7 65.8 65.8 65.9 65.9 66.0 66.0 66.1 66.1 66.2 66.2 66.3 66.3 66.4 66.4 66.5 66.5 66.6 66.6 66.7 66.8 66.8 66.9 66.9 67.0 67.0 67.1 67.1 67.2 67.2 67.3 67.3 67.4 67.4 67.5 67.5 67.6 67.7 67.7 67.8 67.8 67.9 67.9 68.0 68.0 68.1 68.1 68.2 68.2 68.3 68.3 68.4 68.4 68.5 68.6 68.6 68.7 68.7 68.8 68.8 68.9 68.9 69.0 69.0 69.1 69.1 69.2 69.2 69.3 69.3 69.4 69.5 69.5 69.6 69.6 69.7 69.7 69.8 69.8 69.9 69.9 70.0 70.0 70.1 70.1 70.2 70.2 70.3 70.3 70.4 70.5 70.5 70.6 70.6 70.7 70.7 70.8 70.8 70.9 70.9 71.0 71.0 71.1 71.1 71.2 71.2 71.3 71.4 71.4 71.5 71.5 71.6 71.6 71.7 71.7 71.8 71.8 71.9 71.9 72.0 72.0 72.1 72.1 72.2 72.3 72.3 72.4 72.4 72.5 72.5 72.6 72.6 72.7 72.7 72.8 72.8 72.9 72.9 73.0 73.0 73.1 73.2 73.2 73.3 73.3 73.4 73.4 73.5 73.5 73.6 73.6 73.7 73.7 73.8 73.8 73.9 73.9 74.0 74.0 74.1 74.2 74.2 74.3 74.3 74.4 74.4 74.5 74.5 74.6 74.6 74.7 74.7 74.8 74.8 74.9 74.9 75.0 75.1 75.1 75.2 75.2 75.3 75.3 75.4 75.4 75.5 75.5 75.6 75.6 75.7 75.7 75.8 75.8 75.9 76.0 76.0 76.1 76.1 76.2 76.2 76.3 76.3 76.4 76.4 76.5 76.5 76.6 76.6 76.7 76.7 76.8 76.8 76.9 77.0 77.0 77.1 77.1 77.2 77.2 77.3 77.3 77.4 77.4 77.5 77.5 77.6 77.6 77.7 77.7 77.8 77.9 77.9 78.0 78.0 78.1 78.1 78.2 78.2 78.3 78.3 78.4 78.4 78.5 78.5 78.6 78.6 78.7 78.8 78.8 78.9 78.9 79.0 79.0 79.1 79.1 79.2 79.2 79.3 79.3 79.4 79.4 79.5 79.5 79.6 79.7 79.7 79.8 79.8 79.9 79.9 80.0 80.0 80.1 80.1 80.2 80.2 80.3 80.3 80.4 80.4 80.5 80.5 80.6 80.7 80.7 80.8 80.8 80.9 80.9 81.0 81.0 81.1 81.1 81.2 81.2 81.3 81.3 81.4 81.4 81.5 81.6 81.6 81.7 81.7 81.8 81.8 81.9 81.9 82.0 82.0 82.1 82.1 82.2 82.2 82.3 82.3 82.4 82.5 82.5 82.6 82.6 82.7 82.7 82.8 82.8 82.9 82.9 83.0 83.0 83.1 83.1 83.2 83.2 83.3 83.4 83.4 83.5 83.5 83.6 83.6 83.7 83.7 83.8 83.8 83.9 83.9 84.0 84.0 84.1 84.1 84.2 84.2 84.3 84.4 84.4 84.5 84.5 84.6 84.6 84.7 84.7 84.8 84.8 84.9 84.9 85.0 85.0 85.1 85.1 85.2 85.3 85.3 85.4 85.4 85.5 85.5 85.6 85.6 85.7 85.7 85.8 85.8 85.9 85.9 86.0 86.0 86.1 86.2 86.2 86.3 86.3 86.4 86.4 86.5 86.5 86.6 86.6 86.7 86.7 86.8 86.8 86.9 86.9 87.0 87.1 87.1 87.2 87.2 87.3 87.3 87.4 87.4 87.5 87.5 87.6 87.6 87.7 87.7 87.8 87.8 87.9 87.9 88.0 88.1 88.1 88.2 88.2 88.3 88.3 88.4 88.4 88.5 88.5 88.6 88.6 88.7 88.7 88.8 88.8 88.9 89.0 89.0 89.1 89.1 89.2 89.2 89.3 89.3 89.4 89.4 89.5 89.5 89.6 89.6 89.7 89.7 89.8 89.9 89.9 90.0 90.0 90.1 90.1 90.2 90.2 90.3 90.3 90.4 90.4 90.5 90.5 90.6 90.6 90.7 90.8 90.8 90.9 90.9 91.0 91.0 91.1 91.1 91.2 91.2 91.3 91.3 91.4 91.4 91.5 91.5 91.6 91.6 91.7 91.8 91.8 91.9 91.9 92.0 92.0 92.1 92.1 92.2 92.2 92.3 92.3 92.4 92.4 92.5 92.5 92.6 92.7 92.7 92.8 92.8 92.9 92.9 93.0 93.0 93.1 93.1 93.2 93.2 93.3 93.3 93.4 93.4 93.5 93.6 93.6 93.7 93.7 93.8 93.8 93.9 93.9 94.0 94.0 94.1 94.1 94.2 94.2 94.3 94.3 94.4 94.5 94.5 94.6 94.6 94.7 94.7 94.8 94.8 94.9 94.9 95.0 95.0 95.1 95.1 95.2 95.2 95.3 95.3 95.4 95.5 95.5 95.6 95.6 95.7 95.7 95.8 95.8 95.9 95.9 96.0 96.0 96.1 96.1 96.2 96.2 96.3 96.4 96.4 96.5 96.5 96.6 96.6 96.7 96.7 96.8 96.8 96.9 96.9 97.0 97.0 97.1 97.1 97.2 97.3 97.3 97.4 97.4 97.5 97.5 97.6 97.6 97.7 97.7 97.8 97.8 97.9 97.9 98.0 98.0 98.1 98.2 98.2 98.3 98.3 98.4 98.4 98.5 98.5 98.6 98.6 98.7 98.7 98.8 98.8 98.9 98.9 99.0 99.0 99.1 99.2 99.2 99.3 99.3 99.4 99.4 99.5 99.5 99.6 99.6 99.7 99.7 99.8 99.8 99.9 99.9 -found 99 predictions from path traversal Error with prediction: snap lend_intergenic: 8087, rend_intergenic: 3731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24339, rend_intergenic: 20821 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28424, rend_intergenic: 28029 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40247, rend_intergenic: 28525 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41683, rend_intergenic: 40294 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43572, rend_intergenic: 41789 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53030, rend_intergenic: 45036 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53327, rend_intergenic: 53100 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56241, rend_intergenic: 53699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60463, rend_intergenic: 56317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66625, rend_intergenic: 62215 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90382, rend_intergenic: 67221 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94607, rend_intergenic: 91407 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107176, rend_intergenic: 100443 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138937, rend_intergenic: 116348 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 204981, rend_intergenic: 139896 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 211164, rend_intergenic: 205363 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 211487, rend_intergenic: 211244 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213567, rend_intergenic: 211646 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215487, rend_intergenic: 213885 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 217580, rend_intergenic: 215695 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 235341, rend_intergenic: 218218 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242120, rend_intergenic: 236773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252426, rend_intergenic: 250974 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 262461, rend_intergenic: 252925 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270390, rend_intergenic: 263865 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 279424, rend_intergenic: 272378 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281023, rend_intergenic: 279750 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 282738, rend_intergenic: 281224 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 302155, rend_intergenic: 282998 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 324130, rend_intergenic: 302906 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 335437, rend_intergenic: 333889 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 345003, rend_intergenic: 335440 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 346693, rend_intergenic: 345105 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 34 predictions persist after filtering for low support