-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2389

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 17, 104
Couldn't classify 1202, 1310
Sorry, prediction GeneMark_model.110297_t fails validation.
(GAG)	 AG	17-104	GT	AAG
(AGA)	 AG	1202-1310	GT	GGG
-recovered GeneMark_model.110297_t, internal, 17, 104
-recovered GeneMark_model.110297_t, internal, 1202, 1310
Couldn't classify 1, 104
Couldn't classify 1202, 1325
Sorry, prediction HiQ_model.g42059.t1 fails validation.
(TAA)	 CG	1-104	GT	AAG
(AGA)	 AG	1202-1325		CG

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1325
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support