-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2364

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_2364-snap.1-T1
Couldn't classify 378, 392
Couldn't classify 945, 956
Sorry, prediction GeneMark_model.110275_t fails validation.
(GGA)	 AG	378-392	GT	CTG
(CGG)	 AG	418-437	GT	GGG
(AGA)	 AG	491-631	GT	GTG
(AGA)	 AG	669-674	GT	GAG
(AGA)	 AG	945-956	GT	GAG
-recovered GeneMark_model.110275_t, internal, 378, 392
-recovered GeneMark_model.110275_t, internal, 418, 437
-recovered GeneMark_model.110275_t, internal, 491, 631
-recovered GeneMark_model.110275_t, internal, 669, 674
-recovered GeneMark_model.110275_t, internal, 945, 956

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 490, 613
Couldn't classify 897, 1022
Sorry, prediction Augustus_model.g42047.t1 fails validation.
(GCC)	 AG	490-613	GT	AGG
(CTC)	 AG	897-1022	GT	CGG
-recovered Augustus_model.g42047.t1, internal, 490, 613
-recovered Augustus_model.g42047.t1, internal, 897, 1022

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1344
-exon list size: 20


building trellis

4.5    
9.1    
13.6    
18.2    
22.7    
27.3    
31.8    
36.4    
40.9    
45.5    
50.0    
54.5    
59.1    
63.6    
68.2    
72.7    
77.3    
81.8    
86.4    
90.9    
95.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support