-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2314

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 79, 263
Sorry, prediction GeneMark_model.110233_t fails validation.
(GAA)	 AG	79-263	GT	AGG
(GGG)	 AG	287-298	GT	GAG
(CGC)	 AG	508-573	GT	CTG
(GGG)	 AG	611-710	TG	GAT
-recovered GeneMark_model.110233_t, terminal, 611, 710
-recovered GeneMark_model.110233_t, internal, 79, 263
-recovered GeneMark_model.110233_t, internal, 287, 298
-recovered GeneMark_model.110233_t, internal, 508, 573

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1010, 1186
Couldn't classify 1318, 1379
Sorry, prediction snap_scaffold_2314-snap.1-T1 fails validation.
(GAA)	 AG	1010-1186	GT	CGG
(GGG)	 AG	1318-1379	GT	GGG
-recovered snap_scaffold_2314-snap.1-T1, internal, 1010, 1186
-recovered snap_scaffold_2314-snap.1-T1, internal, 1318, 1379

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1389
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support