-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_23/scaffold_23_9740227-10070361 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for HiQ_model.g35556.t1 Valid prediction for GlimmerHMM_glimmerT_52912-T1 Valid prediction for Augustus_model.g35541.t1 Valid prediction for snap_scaffold_23-snap.1936-T1 Couldn't classify 175588, 175797 Sorry, prediction pasa_asmbl_31104.p1 fails validation. (ATG) AC 171627-173213 GT TGG (AAG) AG 175588-175797 CA GCC -recovered pasa_asmbl_31104.p1, initial, 171627, 173213 Valid prediction for GeneMark_model.91924_t Valid prediction for GlimmerHMM_glimmerT_52944-T1 Valid prediction for GeneMark_model.91965_t Valid prediction for GeneMark_model.91943_t Valid prediction for GeneMark_model.91936_t Valid prediction for GeneMark_model.91949_t Valid prediction for GlimmerHMM_glimmerT_52933-T1 Valid prediction for GeneMark_model.91876_t Valid prediction for GlimmerHMM_glimmerT_52919-T1 Valid prediction for GlimmerHMM_glimmerT_52940-T1 Valid prediction for snap_scaffold_23-snap.1902-T1 Valid prediction for GeneMark_model.91942_t Valid prediction for GeneMark_model.91863_t Valid prediction for Augustus_model.g35550.t1 Valid prediction for GeneMark_model.91887_t Valid prediction for snap_scaffold_23-snap.1931-T1 Valid prediction for GlimmerHMM_glimmerT_52928-T1 Valid prediction for snap_scaffold_23-snap.1917-T1 Valid prediction for GeneMark_model.91923_t Valid prediction for snap_scaffold_23-snap.1927-T1 Valid prediction for GeneMark_model.91892_t Valid prediction for snap_scaffold_23-snap.1882-T1 Valid prediction for GeneMark_model.91959_t Valid prediction for GeneMark_model.91927_t Couldn't classify 239596, 239876 Sorry, prediction pasa_asmbl_31112.p1 fails validation. (ATG) AA 237505-237556 GT AAG (GTG) AG 239596-239876 CT ACC -recovered pasa_asmbl_31112.p1, initial, 237505, 237556 Valid prediction for GeneMark_model.91933_t Valid prediction for snap_scaffold_23-snap.1886-T1 Valid prediction for GlimmerHMM_glimmerT_52939-T1 Valid prediction for GeneMark_model.91861_t Valid prediction for GeneMark_model.91954_t Valid prediction for snap_scaffold_23-snap.1926-T1 Valid prediction for snap_scaffold_23-snap.1904-T1 Couldn't classify 200817, 201032 Sorry, prediction pasa_asmbl_31107.p1 fails validation. (GCC) CA 200817-201032 GT AGG (ATG) AG 201576-201681 GT AGG (ATC) AG 202060-202133 GT CTG (GAG) AG 202427-202522 GT AGG (AAG) AG 203331-203447 GT TGG (ATG) AG 203690-203787 GT AAG (GCA) AG 204445-204652 CC AAC -recovered pasa_asmbl_31107.p1, initial, 201576, 201681 -recovered pasa_asmbl_31107.p1, initial, 203690, 203787 -recovered pasa_asmbl_31107.p1, terminal, 204445, 204652 -recovered pasa_asmbl_31107.p1, internal, 201576, 201681 -recovered pasa_asmbl_31107.p1, internal, 202060, 202133 -recovered pasa_asmbl_31107.p1, internal, 202427, 202522 -recovered pasa_asmbl_31107.p1, internal, 203331, 203447 -recovered pasa_asmbl_31107.p1, internal, 203690, 203787 Valid prediction for GeneMark_model.91971_t Couldn't classify 300815, 300886 Sorry, prediction pasa_asmbl_31233.p1 fails validation. (GGA) TA 300815-300886 GT CAG (CAG) AG 301060-301171 GT AGG (GAG) AG 301765-301859 GT AGG (GAC) AG 302167-302280 GT AGG (GGC) AG 302394-302484 GT AGG (TGT) AG 302563-302699 GT TGG (GCT) AG 303012-303105 GT AGG (CAT) AG 303427-303522 GT CGG (TGA) AG 303732-303790 GT AGG (GGC) AG 304047-304169 GT CGG (GCG) AG 304363-304419 AG AAA -recovered pasa_asmbl_31233.p1, terminal, 304363, 304419 -recovered pasa_asmbl_31233.p1, internal, 301060, 301171 -recovered pasa_asmbl_31233.p1, internal, 301765, 301859 -recovered pasa_asmbl_31233.p1, internal, 302167, 302280 -recovered pasa_asmbl_31233.p1, internal, 302394, 302484 -recovered pasa_asmbl_31233.p1, internal, 302563, 302699 -recovered pasa_asmbl_31233.p1, internal, 303012, 303105 -recovered pasa_asmbl_31233.p1, internal, 303427, 303522 -recovered pasa_asmbl_31233.p1, internal, 303732, 303790 -recovered pasa_asmbl_31233.p1, internal, 304047, 304169 Valid prediction for Augustus_model.g35552.t1 Valid prediction for Augustus_model.g35542.t1 Valid prediction for pasa_asmbl_31117.p1 Valid prediction for GeneMark_model.91920_t Couldn't classify 193594, 193602 Sorry, prediction GeneMark_model.91931_t fails validation. (AGC) AG 193594-193602 GT GAG (AGG) AG 193626-193718 GC AGG (ACA) AG 193742-194000 GT AGG (TGG) AG 194319-194509 GT AGG (ACA) AG 195181-195205 AG GAA -recovered GeneMark_model.91931_t, terminal, 195181, 195205 -recovered GeneMark_model.91931_t, internal, 193594, 193602 -recovered GeneMark_model.91931_t, internal, 193626, 193718 -recovered GeneMark_model.91931_t, internal, 193742, 194000 -recovered GeneMark_model.91931_t, internal, 194319, 194509 Valid prediction for snap_scaffold_23-snap.1938-T1 Valid prediction for CodingQuarry_transcript_35713-T1 Valid prediction for GeneMark_model.91895_t Valid prediction for GlimmerHMM_glimmerT_52916-T1 Valid prediction for GlimmerHMM_glimmerT_52930-T1 Valid prediction for GlimmerHMM_glimmerT_52927-T1 Valid prediction for Augustus_model.g35545.t1 Valid prediction for Augustus_model.g35536.t1 Couldn't classify 152217, 152225 Couldn't classify 157018, 157085 Sorry, prediction pasa_asmbl_31259.p1 fails validation. (ATC) TC 152217-152225 GT AGG (GCG) AG 152451-152576 GT TGG (GTG) AG 153606-153655 GT AGG (GTA) AG 155294-155494 GT AGG (ACT) AG 155758-155892 GT AAG (GAT) AG 156466-156629 GC AGG (AGG) AG 157018-157085 GG AGG -recovered pasa_asmbl_31259.p1, internal, 152451, 152576 -recovered pasa_asmbl_31259.p1, internal, 153606, 153655 -recovered pasa_asmbl_31259.p1, internal, 155294, 155494 -recovered pasa_asmbl_31259.p1, internal, 155758, 155892 -recovered pasa_asmbl_31259.p1, internal, 156466, 156629 Valid prediction for GeneMark_model.91908_t Valid prediction for snap_scaffold_23-snap.1899-T1 Valid prediction for Augustus_model.g35547.t1 Valid prediction for snap_scaffold_23-snap.1942-T1 Valid prediction for GlimmerHMM_glimmerT_52937-T1 Valid prediction for snap_scaffold_23-snap.1941-T1 Valid prediction for Augustus_model.g35533.t1 Valid prediction for CodingQuarry_transcript_35706-T1 Valid prediction for GlimmerHMM_glimmerT_52906-T1 Valid prediction for snap_scaffold_23-snap.1888-T1 Valid prediction for GlimmerHMM_glimmerT_52924-T1 Valid prediction for GeneMark_model.91900_t Valid prediction for GeneMark_model.91854_t Valid prediction for snap_scaffold_23-snap.1929-T1 Valid prediction for snap_scaffold_23-snap.1939-T1 Valid prediction for snap_scaffold_23-snap.1916-T1 Valid prediction for GlimmerHMM_glimmerT_52936-T1 Valid prediction for snap_scaffold_23-snap.1933-T1 Valid prediction for GlimmerHMM_glimmerT_52918-T1 Valid prediction for GeneMark_model.91882_t Valid prediction for GeneMark_model.91872_t Couldn't classify 307816, 307989 Sorry, prediction pasa_asmbl_31260.p1 fails validation. (CAG) GA 307816-307989 GT TGG (GCC) AG 308397-308554 GT GGG (ATA) AG 308811-308940 GT CGG (CCT) AG 309263-309563 GT AGG (GTG) AG 309951-310177 GT AGG (ATC) AG 310468-310596 GT AGG (GTG) AG 310860-311030 TT AAT -recovered pasa_asmbl_31260.p1, terminal, 310860, 311030 -recovered pasa_asmbl_31260.p1, internal, 308397, 308554 -recovered pasa_asmbl_31260.p1, internal, 308811, 308940 -recovered pasa_asmbl_31260.p1, internal, 309263, 309563 -recovered pasa_asmbl_31260.p1, internal, 309951, 310177 -recovered pasa_asmbl_31260.p1, internal, 310468, 310596 Valid prediction for Augustus_model.g35553.t1 Valid prediction for Augustus_model.g35534.t1 Valid prediction for snap_scaffold_23-snap.1896-T1 Valid prediction for snap_scaffold_23-snap.1907-T1 Valid prediction for GeneMark_model.91902_t Valid prediction for snap_scaffold_23-snap.1943-T1 Couldn't classify 307215, 307487 Sorry, prediction pasa_asmbl_31123.p1 fails validation. (ATG) GA 305216-305286 GT AGG (ATT) AG 305524-305646 GT GGG (GTG) AG 305778-305844 GT AGG (TGG) AG 305945-306030 GT AGG (AGC) AG 306117-306204 GT AGG (ACC) AG 306415-306502 GT CCG (CTG) AG 306644-306720 GT AGG (GGG) AG 306843-307013 GT AGG (AGC) AG 307215-307487 AT CCA -recovered pasa_asmbl_31123.p1, initial, 305216, 305286 -recovered pasa_asmbl_31123.p1, internal, 305524, 305646 -recovered pasa_asmbl_31123.p1, internal, 305778, 305844 -recovered pasa_asmbl_31123.p1, internal, 305945, 306030 -recovered pasa_asmbl_31123.p1, internal, 306117, 306204 -recovered pasa_asmbl_31123.p1, internal, 306415, 306502 -recovered pasa_asmbl_31123.p1, internal, 306644, 306720 -recovered pasa_asmbl_31123.p1, internal, 306843, 307013 Valid prediction for GlimmerHMM_glimmerT_52929-T1 Valid prediction for GeneMark_model.91947_t Valid prediction for GeneMark_model.91891_t Valid prediction for GeneMark_model.91963_t Valid prediction for GeneMark_model.91915_t Valid prediction for GeneMark_model.91913_t Valid prediction for GeneMark_model.91967_t Valid prediction for GeneMark_model.91953_t Valid prediction for GeneMark_model.91874_t Valid prediction for snap_scaffold_23-snap.1901-T1 Valid prediction for Augustus_model.g35544.t1 Couldn't classify 183389, 183629 Couldn't classify 183869, 183978 Sorry, prediction pasa_asmbl_31105.p1 fails validation. (CCT) CT 183389-183629 GT AGG (GAC) AG 183869-183978 TG ACT Valid prediction for GeneMark_model.91969_t Couldn't classify 272559, 272591 Couldn't classify 273808, 273912 Sorry, prediction CodingQuarry_transcript_35711-T1 fails validation. (ATG) AC 272559-272591 AT AAA (TTG) TG 273808-273912 GT ACG (GTG) AG 274002-274106 GT AGG (GCG) AG 274655-274774 GT AGG (GAG) AG 275327-275506 GT AGG (GGT) AG 276297-276392 GT AGG (CTC) AG 276806-276949 CC GAC -recovered CodingQuarry_transcript_35711-T1, terminal, 276806, 276949 -recovered CodingQuarry_transcript_35711-T1, internal, 274002, 274106 -recovered CodingQuarry_transcript_35711-T1, internal, 274655, 274774 -recovered CodingQuarry_transcript_35711-T1, internal, 275327, 275506 -recovered CodingQuarry_transcript_35711-T1, internal, 276297, 276392 Valid prediction for CodingQuarry_transcript_35712-T1 Valid prediction for GlimmerHMM_glimmerT_52909-T1 Couldn't classify 230413, 230515 Couldn't classify 230651, 230919 Sorry, prediction pasa_asmbl_31109.p1 fails validation. (GGC) CT 230413-230515 GT CAG (ACC) AG 230651-230919 TG GTT Valid prediction for Augustus_model.g35557.t1 Valid prediction for GeneMark_model.91853_t Valid prediction for snap_scaffold_23-snap.1918-T1 Valid prediction for snap_scaffold_23-snap.1934-T1 Valid prediction for GeneMark_model.91859_t Valid prediction for Augustus_model.g35543.t1 Valid prediction for GeneMark_model.91897_t Couldn't classify 267957, 268130 Couldn't classify 268836, 268958 Sorry, prediction pasa_asmbl_31116.p1 fails validation. (GTG) AG 267957-268130 GT AGG (GTG) AG 268265-268434 GT AGG (TCT) AG 268615-268738 GT AGG (ACG) AG 268836-268958 GT AGG -recovered pasa_asmbl_31116.p1, internal, 267957, 268130 -recovered pasa_asmbl_31116.p1, internal, 268265, 268434 -recovered pasa_asmbl_31116.p1, internal, 268615, 268738 -recovered pasa_asmbl_31116.p1, internal, 268836, 268958 Valid prediction for GeneMark_model.91938_t Couldn't classify 144381, 144454 Sorry, prediction pasa_asmbl_31099.p1 fails validation. (CAG) TG 144381-144454 GT AGG (TGT) AG 144967-145094 GT CAG (AGA) AG 145873-145931 GT AGG (TAC) AG 146043-146111 GT AGG (GGC) AG 146220-146363 GT CGG (CTC) AG 146751-146831 GC AGG -recovered pasa_asmbl_31099.p1, terminal, 146751, 146831 -recovered pasa_asmbl_31099.p1, internal, 144967, 145094 -recovered pasa_asmbl_31099.p1, internal, 145873, 145931 -recovered pasa_asmbl_31099.p1, internal, 146043, 146111 -recovered pasa_asmbl_31099.p1, internal, 146220, 146363 -recovered pasa_asmbl_31099.p1, internal, 146751, 146831 Valid prediction for GlimmerHMM_glimmerT_52921-T1 Valid prediction for GeneMark_model.91956_t Valid prediction for GeneMark_model.91910_t Valid prediction for snap_scaffold_23-snap.1924-T1 Valid prediction for GeneMark_model.91877_t Valid prediction for GeneMark_model.91880_t Valid prediction for GeneMark_model.91929_t Valid prediction for GeneMark_model.91911_t Valid prediction for GeneMark_model.91856_t Valid prediction for GeneMark_model.91957_t Valid prediction for GeneMark_model.91960_t Valid prediction for GeneMark_model.91917_t Valid prediction for GeneMark_model.91945_t Valid prediction for Augustus_model.g35539.t1 Valid prediction for GlimmerHMM_glimmerT_52907-T1 Valid prediction for snap_scaffold_23-snap.1922-T1 Valid prediction for HiQ_model.g35554.t1 Valid prediction for GlimmerHMM_glimmerT_52920-T1 Valid prediction for snap_scaffold_23-snap.1919-T1 Valid prediction for GlimmerHMM_glimmerT_52942-T1 Valid prediction for GeneMark_model.91868_t Valid prediction for Augustus_model.g35555.t1 Valid prediction for GeneMark_model.91906_t Valid prediction for GlimmerHMM_glimmerT_52931-T1 Valid prediction for GlimmerHMM_glimmerT_52943-T1 Valid prediction for GeneMark_model.91899_t Valid prediction for Augustus_model.g35540.t1 Valid prediction for snap_scaffold_23-snap.1890-T1 Couldn't classify 89115, 89262 Couldn't classify 89851, 89883 Sorry, prediction pasa_asmbl_31093.p1 fails validation. (AGT) CC 89115-89262 GT CAG (AGG) AG 89500-89645 GT AGG (GTA) AG 89851-89883 AT GGA -recovered pasa_asmbl_31093.p1, internal, 89500, 89645 Valid prediction for GeneMark_model.91884_t Valid prediction for GlimmerHMM_glimmerT_52914-T1 Couldn't classify 260943, 261059 Couldn't classify 265683, 265778 Sorry, prediction pasa_asmbl_31114.p1 fails validation. (CCC) AC 260943-261059 GT AGG (GTT) AG 261268-261320 GT CTG (GTA) AG 261459-261621 GT AGG (GAG) AG 262073-262207 GT AGG (AAC) AG 262392-262532 GT TGG (GAG) AG 262918-263079 GT AGG (ACC) AG 264157-264228 GT AGG (ATA) AG 264329-264584 GT ATG (TGC) AG 265014-265168 GT TGG (ATT) AG 265404-265517 GT AGG (GTG) AG 265683-265778 TG GGT -recovered pasa_asmbl_31114.p1, internal, 261268, 261320 -recovered pasa_asmbl_31114.p1, internal, 261459, 261621 -recovered pasa_asmbl_31114.p1, internal, 262073, 262207 -recovered pasa_asmbl_31114.p1, internal, 262392, 262532 -recovered pasa_asmbl_31114.p1, internal, 262918, 263079 -recovered pasa_asmbl_31114.p1, internal, 264157, 264228 -recovered pasa_asmbl_31114.p1, internal, 264329, 264584 -recovered pasa_asmbl_31114.p1, internal, 265014, 265168 -recovered pasa_asmbl_31114.p1, internal, 265404, 265517 Valid prediction for GlimmerHMM_glimmerT_52908-T1 Valid prediction for GlimmerHMM_glimmerT_52935-T1 Valid prediction for GlimmerHMM_glimmerT_52938-T1 Valid prediction for GeneMark_model.91951_t Valid prediction for GlimmerHMM_glimmerT_52917-T1 Valid prediction for GlimmerHMM_glimmerT_52941-T1 Valid prediction for GeneMark_model.91870_t Valid prediction for GlimmerHMM_glimmerT_52925-T1 Valid prediction for Augustus_model.g35549.t1 Valid prediction for GeneMark_model.91918_t Valid prediction for snap_scaffold_23-snap.1932-T1 Valid prediction for GeneMark_model.91889_t Valid prediction for GeneMark_model.91904_t Couldn't classify 313737, 313922 Sorry, prediction pasa_asmbl_31124.p1 fails validation. (TTT) TG 313737-313922 GT AGG (GTG) AG 314017-314157 GT GGG (AAC) AG 314315-314425 GT TGG (GCG) AG 314758-314862 GA GAG -recovered pasa_asmbl_31124.p1, terminal, 314758, 314862 -recovered pasa_asmbl_31124.p1, internal, 314017, 314157 -recovered pasa_asmbl_31124.p1, internal, 314315, 314425 Valid prediction for snap_scaffold_23-snap.1892-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.91860_t Valid prediction for GlimmerHMM_glimmerT_52934-T1 Valid prediction for snap_scaffold_23-snap.1912-T1 Valid prediction for GeneMark_model.91866_t Valid prediction for snap_scaffold_23-snap.1913-T1 Valid prediction for GeneMark_model.91961_t Valid prediction for GeneMark_model.91962_t Valid prediction for snap_scaffold_23-snap.1915-T1 Valid prediction for GeneMark_model.91968_t Valid prediction for GeneMark_model.91873_t Valid prediction for GlimmerHMM_glimmerT_52922-T1 Valid prediction for GeneMark_model.91972_t Valid prediction for GeneMark_model.91852_t Valid prediction for Augustus_model.g35558.t1 Valid prediction for snap_scaffold_23-snap.1925-T1 Sorry, intron length (6) is less than minimum required (10) Valid prediction for snap_scaffold_23-snap.1891-T1 Valid prediction for GeneMark_model.91875_t Valid prediction for snap_scaffold_23-snap.1898-T1 Valid prediction for Augustus_model.g35551.t1 Couldn't classify 142541, 142603 Sorry, prediction GeneMark_model.91930_t fails validation. (GGA) AG 142541-142603 GT GAG (TAG) AG 143003-143084 GT ATG (GAG) AG 143175-143273 GA AGG -recovered GeneMark_model.91930_t, terminal, 143175, 143273 -recovered GeneMark_model.91930_t, internal, 142541, 142603 -recovered GeneMark_model.91930_t, internal, 143003, 143084 Valid prediction for GlimmerHMM_glimmerT_52913-T1 Valid prediction for GeneMark_model.91928_t Valid prediction for snap_scaffold_23-snap.1894-T1 Valid prediction for GeneMark_model.91896_t Valid prediction for GeneMark_model.91857_t Valid prediction for GeneMark_model.91903_t Valid prediction for GlimmerHMM_glimmerT_52932-T1 Valid prediction for GeneMark_model.91865_t Valid prediction for GeneMark_model.91948_t Valid prediction for snap_scaffold_23-snap.1897-T1 Valid prediction for GeneMark_model.91907_t Valid prediction for GeneMark_model.91964_t Valid prediction for GlimmerHMM_glimmerT_52945-T1 Valid prediction for snap_scaffold_23-snap.1893-T1 Valid prediction for GeneMark_model.91888_t Valid prediction for GeneMark_model.91934_t Valid prediction for GeneMark_model.91970_t Valid prediction for GeneMark_model.91966_t Couldn't classify 101493, 101583 Sorry, prediction pasa_asmbl_31833.p1 fails validation. (ACT) TT 101493-101583 GC AGG (GTT) AG 103325-103410 GT AGG (TGT) AG 104437-104565 CT AGC -recovered pasa_asmbl_31833.p1, terminal, 104437, 104565 -recovered pasa_asmbl_31833.p1, internal, 103325, 103410 Valid prediction for snap_scaffold_23-snap.1914-T1 Valid prediction for GeneMark_model.91901_t Valid prediction for snap_scaffold_23-snap.1885-T1 Valid prediction for snap_scaffold_23-snap.1910-T1 Valid prediction for GeneMark_model.91932_t Valid prediction for Augustus_model.g35535.t1 Valid prediction for snap_scaffold_23-snap.1909-T1 Valid prediction for CodingQuarry_transcript_35705-T1 Valid prediction for snap_scaffold_23-snap.1881-T1 Valid prediction for GeneMark_model.91921_t Valid prediction for snap_scaffold_23-snap.1935-T1 Valid prediction for CodingQuarry_transcript_35710-T1 Valid prediction for GeneMark_model.91879_t Valid prediction for GeneMark_model.91864_t Valid prediction for snap_scaffold_23-snap.1920-T1 Valid prediction for GeneMark_model.91941_t Valid prediction for snap_scaffold_23-snap.1944-T1 Valid prediction for GeneMark_model.91890_t Valid prediction for snap_scaffold_23-snap.1903-T1 Valid prediction for HiQ_model.g35537.t1 Valid prediction for GeneMark_model.91950_t Valid prediction for snap_scaffold_23-snap.1921-T1 Valid prediction for GeneMark_model.91867_t Valid prediction for GeneMark_model.91939_t Valid prediction for GeneMark_model.91898_t Valid prediction for snap_scaffold_23-snap.1895-T1 Valid prediction for snap_scaffold_23-snap.1889-T1 Valid prediction for snap_scaffold_23-snap.1930-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_23-snap.1906-T1 Valid prediction for GeneMark_model.91912_t Valid prediction for snap_scaffold_23-snap.1883-T1 Valid prediction for GeneMark_model.91952_t Valid prediction for snap_scaffold_23-snap.1928-T1 Valid prediction for snap_scaffold_23-snap.1884-T1 Valid prediction for CodingQuarry_transcript_35707-T1 Valid prediction for GeneMark_model.91919_t Valid prediction for GlimmerHMM_glimmerT_52915-T1 Valid prediction for snap_scaffold_23-snap.1937-T1 Valid prediction for GeneMark_model.91937_t Valid prediction for snap_scaffold_23-snap.1940-T1 Valid prediction for GeneMark_model.91944_t Valid prediction for GeneMark_model.91958_t Valid prediction for GeneMark_model.91925_t Valid prediction for GlimmerHMM_glimmerT_52911-T1 Valid prediction for GeneMark_model.91955_t Valid prediction for GeneMark_model.91905_t Valid prediction for GeneMark_model.91916_t Valid prediction for GeneMark_model.91914_t Valid prediction for snap_scaffold_23-snap.1900-T1 Valid prediction for GlimmerHMM_glimmerT_52926-T1 Valid prediction for GeneMark_model.91851_t Valid prediction for Augustus_model.g35548.t1 Valid prediction for GlimmerHMM_glimmerT_52923-T1 Valid prediction for GeneMark_model.91885_t Valid prediction for snap_scaffold_23-snap.1905-T1 Couldn't classify 112850, 112861 Sorry, prediction pasa_asmbl_31832.p1 fails validation. (CTT) TG 112850-112861 GT CTG (GGT) AG 112968-113084 GT AGG (GTG) AG 113633-113832 GT GGG (GGA) AG 114045-114189 GC AGG (AAC) AG 114493-114610 GT AGG (TGC) AG 116710-116807 GT AGG (GAG) AG 117115-117174 GT AGG (ATG) AG 117411-117556 GT AGG (AGT) AG 117777-117936 GT AGG (GCG) AG 118030-118155 GT AGG (TTC) AG 118444-118535 GT TGG (GAC) AG 118747-118942 TC GAT -recovered pasa_asmbl_31832.p1, initial, 117411, 117556 -recovered pasa_asmbl_31832.p1, terminal, 118747, 118942 -recovered pasa_asmbl_31832.p1, internal, 112968, 113084 -recovered pasa_asmbl_31832.p1, internal, 113633, 113832 -recovered pasa_asmbl_31832.p1, internal, 114045, 114189 -recovered pasa_asmbl_31832.p1, internal, 114493, 114610 -recovered pasa_asmbl_31832.p1, internal, 116710, 116807 -recovered pasa_asmbl_31832.p1, internal, 117115, 117174 -recovered pasa_asmbl_31832.p1, internal, 117411, 117556 -recovered pasa_asmbl_31832.p1, internal, 117777, 117936 -recovered pasa_asmbl_31832.p1, internal, 118030, 118155 -recovered pasa_asmbl_31832.p1, internal, 118444, 118535 Valid prediction for Augustus_model.g35538.t1 Valid prediction for GeneMark_model.91922_t Valid prediction for CodingQuarry_transcript_35709-T1 Valid prediction for snap_scaffold_23-snap.1887-T1 Valid prediction for GeneMark_model.91881_t Valid prediction for GeneMark_model.91909_t Valid prediction for GeneMark_model.91855_t Valid prediction for Augustus_model.g35546.t1 Valid prediction for GeneMark_model.91886_t Valid prediction for GeneMark_model.91894_t Valid prediction for GeneMark_model.91869_t Valid prediction for GeneMark_model.91871_t Couldn't classify 233826, 233916 Sorry, prediction pasa_asmbl_31828.p1 fails validation. (GGG) TA 233826-233916 GT AGG (AGG) AG 234019-234108 GT TTG (ACA) AG 235441-235536 GT TGG (GAA) AG 236429-236565 GT AGG (GAA) AG 237326-237432 GT AAG (TTA) AG 237521-237647 GG AAG -recovered pasa_asmbl_31828.p1, terminal, 237521, 237647 -recovered pasa_asmbl_31828.p1, internal, 234019, 234108 -recovered pasa_asmbl_31828.p1, internal, 235441, 235536 -recovered pasa_asmbl_31828.p1, internal, 236429, 236565 -recovered pasa_asmbl_31828.p1, internal, 237326, 237432 Valid prediction for snap_scaffold_23-snap.1908-T1 Valid prediction for GeneMark_model.91862_t Valid prediction for GeneMark_model.91878_t Valid prediction for GeneMark_model.91946_t Valid prediction for GeneMark_model.91893_t Valid prediction for GlimmerHMM_glimmerT_52910-T1 Valid prediction for CodingQuarry_transcript_35708-T1 Valid prediction for GeneMark_model.91935_t Valid prediction for GeneMark_model.91858_t Valid prediction for snap_scaffold_23-snap.1923-T1 Valid prediction for snap_scaffold_23-snap.1911-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 22302, rend_intergenic: 3277 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47771, rend_intergenic: 22315 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57095, rend_intergenic: 47997 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71623, rend_intergenic: 57518 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 80604, rend_intergenic: 75726 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105434, rend_intergenic: 96571 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121779, rend_intergenic: 112548 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128324, rend_intergenic: 122007 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135521, rend_intergenic: 130317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146831, rend_intergenic: 141660 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157473, rend_intergenic: 148485 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170495, rend_intergenic: 159566 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207954, rend_intergenic: 171416 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 221347, rend_intergenic: 212075 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 232038, rend_intergenic: 225571 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 259482, rend_intergenic: 251010 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 264234, rend_intergenic: 260242 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270559, rend_intergenic: 264308 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276980, rend_intergenic: 271879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 288790, rend_intergenic: 280226 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 294186, rend_intergenic: 291114 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 299621, rend_intergenic: 297567 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 311030, rend_intergenic: 306839 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 330135 -exon list size: 1513 building trellis 0.1 0.1 0.2 0.3 0.3 0.4 0.5 0.5 0.6 0.7 0.7 0.8 0.9 0.9 1.0 1.1 1.1 1.2 1.3 1.3 1.4 1.5 1.5 1.6 1.7 1.7 1.8 1.8 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.4 2.4 2.5 2.6 2.6 2.7 2.8 2.8 2.9 3.0 3.0 3.1 3.2 3.2 3.3 3.4 3.4 3.5 3.6 3.6 3.7 3.8 3.8 3.9 4.0 4.0 4.1 4.2 4.2 4.3 4.4 4.4 4.5 4.6 4.6 4.7 4.8 4.8 4.9 5.0 5.0 5.1 5.1 5.2 5.3 5.3 5.4 5.5 5.5 5.6 5.7 5.7 5.8 5.9 5.9 6.0 6.1 6.1 6.2 6.3 6.3 6.4 6.5 6.5 6.6 6.7 6.7 6.8 6.9 6.9 7.0 7.1 7.1 7.2 7.3 7.3 7.4 7.5 7.5 7.6 7.7 7.7 7.8 7.9 7.9 8.0 8.1 8.1 8.2 8.3 8.3 8.4 8.4 8.5 8.6 8.6 8.7 8.8 8.8 8.9 9.0 9.0 9.1 9.2 9.2 9.3 9.4 9.4 9.5 9.6 9.6 9.7 9.8 9.8 9.9 10.0 10.0 10.1 10.2 10.2 10.3 10.4 10.4 10.5 10.6 10.6 10.7 10.8 10.8 10.9 11.0 11.0 11.1 11.2 11.2 11.3 11.4 11.4 11.5 11.6 11.6 11.7 11.7 11.8 11.9 11.9 12.0 12.1 12.1 12.2 12.3 12.3 12.4 12.5 12.5 12.6 12.7 12.7 12.8 12.9 12.9 13.0 13.1 13.1 13.2 13.3 13.3 13.4 13.5 13.5 13.6 13.7 13.7 13.8 13.9 13.9 14.0 14.1 14.1 14.2 14.3 14.3 14.4 14.5 14.5 14.6 14.7 14.7 14.8 14.9 14.9 15.0 15.0 15.1 15.2 15.2 15.3 15.4 15.4 15.5 15.6 15.6 15.7 15.8 15.8 15.9 16.0 16.0 16.1 16.2 16.2 16.3 16.4 16.4 16.5 16.6 16.6 16.7 16.8 16.8 16.9 17.0 17.0 17.1 17.2 17.2 17.3 17.4 17.4 17.5 17.6 17.6 17.7 17.8 17.8 17.9 18.0 18.0 18.1 18.2 18.2 18.3 18.3 18.4 18.5 18.5 18.6 18.7 18.7 18.8 18.9 18.9 19.0 19.1 19.1 19.2 19.3 19.3 19.4 19.5 19.5 19.6 19.7 19.7 19.8 19.9 19.9 20.0 20.1 20.1 20.2 20.3 20.3 20.4 20.5 20.5 20.6 20.7 20.7 20.8 20.9 20.9 21.0 21.1 21.1 21.2 21.3 21.3 21.4 21.5 21.5 21.6 21.7 21.7 21.8 21.8 21.9 22.0 22.0 22.1 22.2 22.2 22.3 22.4 22.4 22.5 22.6 22.6 22.7 22.8 22.8 22.9 23.0 23.0 23.1 23.2 23.2 23.3 23.4 23.4 23.5 23.6 23.6 23.7 23.8 23.8 23.9 24.0 24.0 24.1 24.2 24.2 24.3 24.4 24.4 24.5 24.6 24.6 24.7 24.8 24.8 24.9 25.0 25.0 25.1 25.1 25.2 25.3 25.3 25.4 25.5 25.5 25.6 25.7 25.7 25.8 25.9 25.9 26.0 26.1 26.1 26.2 26.3 26.3 26.4 26.5 26.5 26.6 26.7 26.7 26.8 26.9 26.9 27.0 27.1 27.1 27.2 27.3 27.3 27.4 27.5 27.5 27.6 27.7 27.7 27.8 27.9 27.9 28.0 28.1 28.1 28.2 28.3 28.3 28.4 28.4 28.5 28.6 28.6 28.7 28.8 28.8 28.9 29.0 29.0 29.1 29.2 29.2 29.3 29.4 29.4 29.5 29.6 29.6 29.7 29.8 29.8 29.9 30.0 30.0 30.1 30.2 30.2 30.3 30.4 30.4 30.5 30.6 30.6 30.7 30.8 30.8 30.9 31.0 31.0 31.1 31.2 31.2 31.3 31.4 31.4 31.5 31.6 31.6 31.7 31.7 31.8 31.9 31.9 32.0 32.1 32.1 32.2 32.3 32.3 32.4 32.5 32.5 32.6 32.7 32.7 32.8 32.9 32.9 33.0 33.1 33.1 33.2 33.3 33.3 33.4 33.5 33.5 33.6 33.7 33.7 33.8 33.9 33.9 34.0 34.1 34.1 34.2 34.3 34.3 34.4 34.5 34.5 34.6 34.7 34.7 34.8 34.9 34.9 35.0 35.0 35.1 35.2 35.2 35.3 35.4 35.4 35.5 35.6 35.6 35.7 35.8 35.8 35.9 36.0 36.0 36.1 36.2 36.2 36.3 36.4 36.4 36.5 36.6 36.6 36.7 36.8 36.8 36.9 37.0 37.0 37.1 37.2 37.2 37.3 37.4 37.4 37.5 37.6 37.6 37.7 37.8 37.8 37.9 38.0 38.0 38.1 38.2 38.2 38.3 38.3 38.4 38.5 38.5 38.6 38.7 38.7 38.8 38.9 38.9 39.0 39.1 39.1 39.2 39.3 39.3 39.4 39.5 39.5 39.6 39.7 39.7 39.8 39.9 39.9 40.0 40.1 40.1 40.2 40.3 40.3 40.4 40.5 40.5 40.6 40.7 40.7 40.8 40.9 40.9 41.0 41.1 41.1 41.2 41.3 41.3 41.4 41.5 41.5 41.6 41.7 41.7 41.8 41.8 41.9 42.0 42.0 42.1 42.2 42.2 42.3 42.4 42.4 42.5 42.6 42.6 42.7 42.8 42.8 42.9 43.0 43.0 43.1 43.2 43.2 43.3 43.4 43.4 43.5 43.6 43.6 43.7 43.8 43.8 43.9 44.0 44.0 44.1 44.2 44.2 44.3 44.4 44.4 44.5 44.6 44.6 44.7 44.8 44.8 44.9 45.0 45.0 45.1 45.1 45.2 45.3 45.3 45.4 45.5 45.5 45.6 45.7 45.7 45.8 45.9 45.9 46.0 46.1 46.1 46.2 46.3 46.3 46.4 46.5 46.5 46.6 46.7 46.7 46.8 46.9 46.9 47.0 47.1 47.1 47.2 47.3 47.3 47.4 47.5 47.5 47.6 47.7 47.7 47.8 47.9 47.9 48.0 48.1 48.1 48.2 48.3 48.3 48.4 48.4 48.5 48.6 48.6 48.7 48.8 48.8 48.9 49.0 49.0 49.1 49.2 49.2 49.3 49.4 49.4 49.5 49.6 49.6 49.7 49.8 49.8 49.9 50.0 50.0 50.1 50.2 50.2 50.3 50.4 50.4 50.5 50.6 50.6 50.7 50.8 50.8 50.9 51.0 51.0 51.1 51.2 51.2 51.3 51.4 51.4 51.5 51.6 51.6 51.7 51.7 51.8 51.9 51.9 52.0 52.1 52.1 52.2 52.3 52.3 52.4 52.5 52.5 52.6 52.7 52.7 52.8 52.9 52.9 53.0 53.1 53.1 53.2 53.3 53.3 53.4 53.5 53.5 53.6 53.7 53.7 53.8 53.9 53.9 54.0 54.1 54.1 54.2 54.3 54.3 54.4 54.5 54.5 54.6 54.7 54.7 54.8 54.9 54.9 55.0 55.0 55.1 55.2 55.2 55.3 55.4 55.4 55.5 55.6 55.6 55.7 55.8 55.8 55.9 56.0 56.0 56.1 56.2 56.2 56.3 56.4 56.4 56.5 56.6 56.6 56.7 56.8 56.8 56.9 57.0 57.0 57.1 57.2 57.2 57.3 57.4 57.4 57.5 57.6 57.6 57.7 57.8 57.8 57.9 58.0 58.0 58.1 58.2 58.2 58.3 58.3 58.4 58.5 58.5 58.6 58.7 58.7 58.8 58.9 58.9 59.0 59.1 59.1 59.2 59.3 59.3 59.4 59.5 59.5 59.6 59.7 59.7 59.8 59.9 59.9 60.0 60.1 60.1 60.2 60.3 60.3 60.4 60.5 60.5 60.6 60.7 60.7 60.8 60.9 60.9 61.0 61.1 61.1 61.2 61.3 61.3 61.4 61.5 61.5 61.6 61.7 61.7 61.8 61.8 61.9 62.0 62.0 62.1 62.2 62.2 62.3 62.4 62.4 62.5 62.6 62.6 62.7 62.8 62.8 62.9 63.0 63.0 63.1 63.2 63.2 63.3 63.4 63.4 63.5 63.6 63.6 63.7 63.8 63.8 63.9 64.0 64.0 64.1 64.2 64.2 64.3 64.4 64.4 64.5 64.6 64.6 64.7 64.8 64.8 64.9 65.0 65.0 65.1 65.1 65.2 65.3 65.3 65.4 65.5 65.5 65.6 65.7 65.7 65.8 65.9 65.9 66.0 66.1 66.1 66.2 66.3 66.3 66.4 66.5 66.5 66.6 66.7 66.7 66.8 66.9 66.9 67.0 67.1 67.1 67.2 67.3 67.3 67.4 67.5 67.5 67.6 67.7 67.7 67.8 67.9 67.9 68.0 68.1 68.1 68.2 68.3 68.3 68.4 68.4 68.5 68.6 68.6 68.7 68.8 68.8 68.9 69.0 69.0 69.1 69.2 69.2 69.3 69.4 69.4 69.5 69.6 69.6 69.7 69.8 69.8 69.9 70.0 70.0 70.1 70.2 70.2 70.3 70.4 70.4 70.5 70.6 70.6 70.7 70.8 70.8 70.9 71.0 71.0 71.1 71.2 71.2 71.3 71.4 71.4 71.5 71.6 71.6 71.7 71.7 71.8 71.9 71.9 72.0 72.1 72.1 72.2 72.3 72.3 72.4 72.5 72.5 72.6 72.7 72.7 72.8 72.9 72.9 73.0 73.1 73.1 73.2 73.3 73.3 73.4 73.5 73.5 73.6 73.7 73.7 73.8 73.9 73.9 74.0 74.1 74.1 74.2 74.3 74.3 74.4 74.5 74.5 74.6 74.7 74.7 74.8 74.9 74.9 75.0 75.0 75.1 75.2 75.2 75.3 75.4 75.4 75.5 75.6 75.6 75.7 75.8 75.8 75.9 76.0 76.0 76.1 76.2 76.2 76.3 76.4 76.4 76.5 76.6 76.6 76.7 76.8 76.8 76.9 77.0 77.0 77.1 77.2 77.2 77.3 77.4 77.4 77.5 77.6 77.6 77.7 77.8 77.8 77.9 78.0 78.0 78.1 78.2 78.2 78.3 78.3 78.4 78.5 78.5 78.6 78.7 78.7 78.8 78.9 78.9 79.0 79.1 79.1 79.2 79.3 79.3 79.4 79.5 79.5 79.6 79.7 79.7 79.8 79.9 79.9 80.0 80.1 80.1 80.2 80.3 80.3 80.4 80.5 80.5 80.6 80.7 80.7 80.8 80.9 80.9 81.0 81.1 81.1 81.2 81.3 81.3 81.4 81.5 81.5 81.6 81.7 81.7 81.8 81.8 81.9 82.0 82.0 82.1 82.2 82.2 82.3 82.4 82.4 82.5 82.6 82.6 82.7 82.8 82.8 82.9 83.0 83.0 83.1 83.2 83.2 83.3 83.4 83.4 83.5 83.6 83.6 83.7 83.8 83.8 83.9 84.0 84.0 84.1 84.2 84.2 84.3 84.4 84.4 84.5 84.6 84.6 84.7 84.8 84.8 84.9 85.0 85.0 85.1 85.1 85.2 85.3 85.3 85.4 85.5 85.5 85.6 85.7 85.7 85.8 85.9 85.9 86.0 86.1 86.1 86.2 86.3 86.3 86.4 86.5 86.5 86.6 86.7 86.7 86.8 86.9 86.9 87.0 87.1 87.1 87.2 87.3 87.3 87.4 87.5 87.5 87.6 87.7 87.7 87.8 87.9 87.9 88.0 88.1 88.1 88.2 88.3 88.3 88.4 88.4 88.5 88.6 88.6 88.7 88.8 88.8 88.9 89.0 89.0 89.1 89.2 89.2 89.3 89.4 89.4 89.5 89.6 89.6 89.7 89.8 89.8 89.9 90.0 90.0 90.1 90.2 90.2 90.3 90.4 90.4 90.5 90.6 90.6 90.7 90.8 90.8 90.9 91.0 91.0 91.1 91.2 91.2 91.3 91.4 91.4 91.5 91.6 91.6 91.7 91.7 91.8 91.9 91.9 92.0 92.1 92.1 92.2 92.3 92.3 92.4 92.5 92.5 92.6 92.7 92.7 92.8 92.9 92.9 93.0 93.1 93.1 93.2 93.3 93.3 93.4 93.5 93.5 93.6 93.7 93.7 93.8 93.9 93.9 94.0 94.1 94.1 94.2 94.3 94.3 94.4 94.5 94.5 94.6 94.7 94.7 94.8 94.9 94.9 95.0 95.0 95.1 95.2 95.2 95.3 95.4 95.4 95.5 95.6 95.6 95.7 95.8 95.8 95.9 96.0 96.0 96.1 96.2 96.2 96.3 96.4 96.4 96.5 96.6 96.6 96.7 96.8 96.8 96.9 97.0 97.0 97.1 97.2 97.2 97.3 97.4 97.4 97.5 97.6 97.6 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.2 98.2 98.3 98.3 98.4 98.5 98.5 98.6 98.7 98.7 98.8 98.9 98.9 99.0 99.1 99.1 99.2 99.3 99.3 99.4 99.5 99.5 99.6 99.7 99.7 99.8 99.9 99.9 -found 74 predictions from path traversal Error with prediction: snap lend_intergenic: 22302, rend_intergenic: 3277 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47771, rend_intergenic: 22315 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57095, rend_intergenic: 47997 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71623, rend_intergenic: 57518 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 80604, rend_intergenic: 75726 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105434, rend_intergenic: 96571 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121779, rend_intergenic: 112548 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128324, rend_intergenic: 122007 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135521, rend_intergenic: 130317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146831, rend_intergenic: 141660 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157473, rend_intergenic: 148485 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170495, rend_intergenic: 159566 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207954, rend_intergenic: 171416 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 221347, rend_intergenic: 212075 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 232038, rend_intergenic: 225571 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 259482, rend_intergenic: 251010 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 264234, rend_intergenic: 260242 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270559, rend_intergenic: 264308 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276980, rend_intergenic: 271879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 288790, rend_intergenic: 280226 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 294186, rend_intergenic: 291114 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 299621, rend_intergenic: 297567 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 311030, rend_intergenic: 306839 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 34 predictions persist after filtering for low support