-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_23/scaffold_23_7215317-7436776

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g35330.t1
Valid prediction for GeneMark_model.91046_t
Valid prediction for GeneMark_model.91050_t
Valid prediction for GeneMark_model.91093_t
Valid prediction for GlimmerHMM_glimmerT_52537-T1
Valid prediction for GeneMark_model.91104_t
Valid prediction for GlimmerHMM_glimmerT_52542-T1
Valid prediction for GlimmerHMM_glimmerT_52514-T1
Valid prediction for GeneMark_model.91091_t
Valid prediction for GeneMark_model.91082_t
Valid prediction for snap_scaffold_23-snap.1340-T1
Valid prediction for Augustus_model.g35331.t1
Valid prediction for snap_scaffold_23-snap.1339-T1
Valid prediction for Augustus_model.g35322.t1
Valid prediction for GeneMark_model.91059_t
Valid prediction for GeneMark_model.91084_t
Valid prediction for snap_scaffold_23-snap.1365-T1
Valid prediction for snap_scaffold_23-snap.1360-T1
Valid prediction for snap_scaffold_23-snap.1328-T1
Valid prediction for GeneMark_model.91073_t
Valid prediction for Augustus_model.g35334.t1
Valid prediction for GlimmerHMM_glimmerT_52539-T1
Valid prediction for pasa_asmbl_30979.p1
Valid prediction for GeneMark_model.91074_t
Valid prediction for snap_scaffold_23-snap.1357-T1
Valid prediction for GlimmerHMM_glimmerT_52543-T1
Valid prediction for GeneMark_model.91060_t
Valid prediction for snap_scaffold_23-snap.1352-T1
Valid prediction for snap_scaffold_23-snap.1327-T1
Valid prediction for Augustus_model.g35326.t1
Valid prediction for snap_scaffold_23-snap.1358-T1
Valid prediction for GeneMark_model.91100_t
Valid prediction for HiQ_model.g35316.t1
Valid prediction for GlimmerHMM_glimmerT_52535-T1
Valid prediction for GeneMark_model.91052_t
Valid prediction for GeneMark_model.91097_t
Valid prediction for Augustus_model.g35333.t1
Valid prediction for Augustus_model.g35310.t1
Valid prediction for CodingQuarry_transcript_35643-T1
Valid prediction for HiQ_model.g35311.t1
Valid prediction for GlimmerHMM_glimmerT_52516-T1
Valid prediction for GlimmerHMM_glimmerT_52530-T1
Valid prediction for GlimmerHMM_glimmerT_52536-T1
Valid prediction for GeneMark_model.91102_t
Valid prediction for GeneMark_model.91077_t
Valid prediction for snap_scaffold_23-snap.1321-T1
Valid prediction for snap_scaffold_23-snap.1320-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_52525-T1
Valid prediction for GeneMark_model.91045_t
Valid prediction for GlimmerHMM_glimmerT_52545-T1
Valid prediction for GlimmerHMM_glimmerT_52547-T1
Valid prediction for GeneMark_model.91040_t
Valid prediction for GeneMark_model.91062_t
Valid prediction for GeneMark_model.91063_t
Valid prediction for GeneMark_model.91095_t
Valid prediction for snap_scaffold_23-snap.1330-T1
Valid prediction for snap_scaffold_23-snap.1345-T1
Valid prediction for snap_scaffold_23-snap.1355-T1
Valid prediction for GeneMark_model.91079_t
Couldn't classify 116641, 117135
Sorry, prediction pasa_asmbl_30983.p2 fails validation.
(GTG)	 TT	116641-117135	TG	GAT
Valid prediction for GeneMark_model.91055_t
Couldn't classify 77000, 77242
Sorry, prediction pasa_asmbl_30981.p1 fails validation.
(GGT)	 GG	77000-77242	GT	AGG
(GAC)	 AG	77476-77569	GT	ACG
(GGT)	 AG	77834-77991	GT	AGG
(GTG)	 AG	78798-79008	GT	CCG
(CCT)	 AG	80315-80463	GT	AGG
(AAG)	 AG	80685-80799	GT	TGG
(TCC)	 AG	81253-81407	GC	AAG
-recovered pasa_asmbl_30981.p1, terminal, 81253, 81407
-recovered pasa_asmbl_30981.p1, internal, 77476, 77569
-recovered pasa_asmbl_30981.p1, internal, 77834, 77991
-recovered pasa_asmbl_30981.p1, internal, 78798, 79008
-recovered pasa_asmbl_30981.p1, internal, 80315, 80463
-recovered pasa_asmbl_30981.p1, internal, 80685, 80799
-recovered pasa_asmbl_30981.p1, internal, 81253, 81407
Couldn't classify 186920, 187027
Sorry, prediction pasa_asmbl_30989.p1 fails validation.
(GCG)	 AG	186920-187027	GT	AGG
(AAG)	 AG	187504-187639	GT	GAG
(TGG)	 AG	188420-188503	GT	GCG
(TGT)	 AG	188699-188859	GT	AGG
(GAG)	 AG	188954-189046	GT	AGG
(GAG)	 AG	189276-189362	GT	AGG
(TCT)	 AG	189594-189686	GT	AGG
(GTG)	 AG	191268-191363	GT	AGG
(GTG)	 AG	191714-191846	GT	GAG
(CCA)	 AG	192021-192091	GT	AGG
(AGG)	 AG	192304-192432	GT	AGG
(CCC)	 AG	192750-192879	GT	TGG
(TGA)	 AG	193012-193139	AG	GAA
-recovered pasa_asmbl_30989.p1, terminal, 193012, 193139
-recovered pasa_asmbl_30989.p1, internal, 186920, 187027
-recovered pasa_asmbl_30989.p1, internal, 187504, 187639
-recovered pasa_asmbl_30989.p1, internal, 188420, 188503
-recovered pasa_asmbl_30989.p1, internal, 188699, 188859
-recovered pasa_asmbl_30989.p1, internal, 188954, 189046
-recovered pasa_asmbl_30989.p1, internal, 189276, 189362
-recovered pasa_asmbl_30989.p1, internal, 189594, 189686
-recovered pasa_asmbl_30989.p1, internal, 191268, 191363
-recovered pasa_asmbl_30989.p1, internal, 191714, 191846
-recovered pasa_asmbl_30989.p1, internal, 192021, 192091
-recovered pasa_asmbl_30989.p1, internal, 192304, 192432
-recovered pasa_asmbl_30989.p1, internal, 192750, 192879
Valid prediction for GeneMark_model.91048_t
Valid prediction for GlimmerHMM_glimmerT_52541-T1
Valid prediction for GeneMark_model.91088_t
Valid prediction for snap_scaffold_23-snap.1336-T1
Valid prediction for GeneMark_model.91054_t
Valid prediction for GeneMark_model.91053_t
Valid prediction for GeneMark_model.91066_t
Valid prediction for snap_scaffold_23-snap.1337-T1
Valid prediction for GeneMark_model.91043_t
Valid prediction for GlimmerHMM_glimmerT_52544-T1
Valid prediction for GeneMark_model.91080_t
Valid prediction for GlimmerHMM_glimmerT_52521-T1
Valid prediction for Augustus_model.g35318.t1
Valid prediction for GeneMark_model.91068_t
Valid prediction for HiQ_model.g35328.t1
Valid prediction for snap_scaffold_23-snap.1350-T1
Valid prediction for GlimmerHMM_glimmerT_52534-T1
Valid prediction for snap_scaffold_23-snap.1366-T1
Valid prediction for GeneMark_model.91086_t
Valid prediction for snap_scaffold_23-snap.1331-T1
Couldn't classify 213655, 213663
Couldn't classify 218117, 218290
Sorry, prediction pasa_asmbl_30992.p1 fails validation.
(CAC)	 AC	213655-213663	GT	AGG
(ATC)	 AG	213979-214078	GT	AGG
(CGG)	 AG	214358-214443	GT	AGG
(GTC)	 AG	215470-215641	GT	AGG
(ACA)	 AG	215742-215921	GC	AGG
(TGT)	 AG	216095-216217	GT	AGG
(TCT)	 AG	216547-216659	GT	CTG
(GAA)	 AG	216907-216949	GT	AGG
(ACT)	 AG	217216-217327	GT	AGG
(GTC)	 AG	217442-217616	GT	TGG
(GGG)	 AG	217719-217889	GT	CAG
(GAC)	 AG	218117-218290	AC	CCA
-recovered pasa_asmbl_30992.p1, internal, 213979, 214078
-recovered pasa_asmbl_30992.p1, internal, 214358, 214443
-recovered pasa_asmbl_30992.p1, internal, 215470, 215641
-recovered pasa_asmbl_30992.p1, internal, 215742, 215921
-recovered pasa_asmbl_30992.p1, internal, 216095, 216217
-recovered pasa_asmbl_30992.p1, internal, 216547, 216659
-recovered pasa_asmbl_30992.p1, internal, 216907, 216949
-recovered pasa_asmbl_30992.p1, internal, 217216, 217327
-recovered pasa_asmbl_30992.p1, internal, 217442, 217616
-recovered pasa_asmbl_30992.p1, internal, 217719, 217889
Valid prediction for GeneMark_model.91057_t
Valid prediction for snap_scaffold_23-snap.1338-T1
Valid prediction for GlimmerHMM_glimmerT_52538-T1
Couldn't classify 218540, 218881
Sorry, prediction pasa_asmbl_30994.p1 fails validation.
(CGG)	 TT	218540-218881	AC	GAA
Valid prediction for GeneMark_model.91041_t
Valid prediction for GlimmerHMM_glimmerT_52548-T1
Valid prediction for snap_scaffold_23-snap.1323-T1
Valid prediction for CodingQuarry_transcript_35644-T1
Valid prediction for snap_scaffold_23-snap.1322-T1
Valid prediction for GlimmerHMM_glimmerT_52522-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_52519-T1
Valid prediction for GeneMark_model.91078_t
Couldn't classify 176915, 177073
Couldn't classify 180555, 180605
Sorry, prediction pasa_asmbl_31739.p1 fails validation.
(TCT)	 TC	176915-177073	GT	AGG
(GAA)	 AG	177564-177652	GT	GGG
(GAA)	 AG	177770-177824	GT	AGG
(GCG)	 AG	180555-180605	GG	CAG
-recovered pasa_asmbl_31739.p1, internal, 177564, 177652
-recovered pasa_asmbl_31739.p1, internal, 177770, 177824
Valid prediction for snap_scaffold_23-snap.1346-T1
Valid prediction for pasa_asmbl_31748.p1
Couldn't classify 190315, 190338
Couldn't classify 191649, 191774
Sorry, prediction pasa_asmbl_31903.p1 fails validation.
(GCC)	 CT	190315-190338	GT	ATG
(AGT)	 AG	190626-190793	GT	AGG
(ACG)	 AG	191649-191774	GA	GGG
-recovered pasa_asmbl_31903.p1, internal, 190626, 190793
Valid prediction for GlimmerHMM_glimmerT_52546-T1
Valid prediction for GlimmerHMM_glimmerT_52520-T1
Valid prediction for snap_scaffold_23-snap.1326-T1
Valid prediction for snap_scaffold_23-snap.1334-T1
Valid prediction for pasa_asmbl_31747.p1
Valid prediction for GeneMark_model.91049_t
Valid prediction for GlimmerHMM_glimmerT_52513-T1
Valid prediction for GlimmerHMM_glimmerT_52526-T1
Valid prediction for snap_scaffold_23-snap.1342-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_23-snap.1332-T1
Valid prediction for snap_scaffold_23-snap.1324-T1
Valid prediction for GeneMark_model.91058_t
Valid prediction for GeneMark_model.91089_t
Valid prediction for GeneMark_model.91056_t
Valid prediction for CodingQuarry_transcript_35649-T1
Valid prediction for HiQ_model.g35332.t1
Valid prediction for GlimmerHMM_glimmerT_52515-T1
Valid prediction for snap_scaffold_23-snap.1354-T1
Valid prediction for snap_scaffold_23-snap.1347-T1
Valid prediction for GeneMark_model.91065_t
Valid prediction for snap_scaffold_23-snap.1362-T1
Valid prediction for Augustus_model.g35327.t1
Valid prediction for GlimmerHMM_glimmerT_52540-T1
Valid prediction for CodingQuarry_transcript_35645-T1
Valid prediction for GeneMark_model.91047_t
Valid prediction for GlimmerHMM_glimmerT_52518-T1
Valid prediction for GeneMark_model.91069_t
Valid prediction for Augustus_model.g35312.t1
Valid prediction for snap_scaffold_23-snap.1364-T1
Valid prediction for snap_scaffold_23-snap.1359-T1
Valid prediction for snap_scaffold_23-snap.1349-T1
Valid prediction for GlimmerHMM_glimmerT_52533-T1
Valid prediction for snap_scaffold_23-snap.1356-T1
Valid prediction for CodingQuarry_transcript_35650-T1
Valid prediction for CodingQuarry_transcript_35646-T1
Valid prediction for GlimmerHMM_glimmerT_52531-T1
Valid prediction for GeneMark_model.91087_t
Valid prediction for Augustus_model.g35329.t1
Valid prediction for snap_scaffold_23-snap.1363-T1
Valid prediction for HiQ_model.g35321.t1
Valid prediction for GlimmerHMM_glimmerT_52529-T1
Valid prediction for GeneMark_model.91076_t
Valid prediction for Augustus_model.g35323.t1
Valid prediction for GeneMark_model.91075_t
Valid prediction for GeneMark_model.91061_t
Valid prediction for GlimmerHMM_glimmerT_52532-T1
Valid prediction for HiQ_model.g35317.t1
Valid prediction for GeneMark_model.91081_t
Valid prediction for snap_scaffold_23-snap.1367-T1
Valid prediction for Augustus_model.g35324.t1
Valid prediction for snap_scaffold_23-snap.1344-T1
Valid prediction for GeneMark_model.91094_t
Valid prediction for GeneMark_model.91101_t
Valid prediction for snap_scaffold_23-snap.1368-T1
Valid prediction for snap_scaffold_23-snap.1335-T1
Valid prediction for snap_scaffold_23-snap.1348-T1
Valid prediction for GeneMark_model.91044_t
Valid prediction for GeneMark_model.91042_t
Valid prediction for Augustus_model.g35313.t1
Couldn't classify 115604, 116167
Sorry, prediction pasa_asmbl_31746.p1 fails validation.
(TTC)	 AC	115604-116167	TG	GAT
Valid prediction for GlimmerHMM_glimmerT_52524-T1
Valid prediction for Augustus_model.g35325.t1
Valid prediction for GeneMark_model.91083_t
Valid prediction for snap_scaffold_23-snap.1341-T1
Valid prediction for snap_scaffold_23-snap.1361-T1
Valid prediction for GeneMark_model.91067_t
Valid prediction for GlimmerHMM_glimmerT_52517-T1
Valid prediction for GlimmerHMM_glimmerT_52528-T1
Valid prediction for GeneMark_model.91092_t
Valid prediction for GeneMark_model.91090_t
Valid prediction for CodingQuarry_transcript_35648-T1
Valid prediction for Augustus_model.g35320.t1
Valid prediction for snap_scaffold_23-snap.1351-T1
Valid prediction for snap_scaffold_23-snap.1353-T1
Valid prediction for GeneMark_model.91072_t
Valid prediction for pasa_asmbl_31742.p1
Valid prediction for Augustus_model.g35314.t1
Valid prediction for GeneMark_model.91051_t
Valid prediction for GeneMark_model.91071_t
Valid prediction for GeneMark_model.91070_t
Valid prediction for CodingQuarry_transcript_35647-T1
Valid prediction for GeneMark_model.91064_t
Valid prediction for Augustus_model.g35315.t1
Valid prediction for snap_scaffold_23-snap.1325-T1
Valid prediction for snap_scaffold_23-snap.1329-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for Augustus_model.g35319.t1
Valid prediction for snap_scaffold_23-snap.1343-T1
Valid prediction for snap_scaffold_23-snap.1333-T1
Valid prediction for GlimmerHMM_glimmerT_52523-T1
Valid prediction for GeneMark_model.91103_t
Valid prediction for GeneMark_model.91085_t
Valid prediction for GeneMark_model.91098_t
Valid prediction for GlimmerHMM_glimmerT_52527-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 22739, rend_intergenic: 16335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41544, rend_intergenic: 28245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42314, rend_intergenic: 42113  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49980, rend_intergenic: 43582  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56878, rend_intergenic: 50310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75641, rend_intergenic: 73047  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88933, rend_intergenic: 84773  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101076, rend_intergenic: 97381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136024, rend_intergenic: 125725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139831, rend_intergenic: 137847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145476, rend_intergenic: 141157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165291, rend_intergenic: 151613  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193139, rend_intergenic: 174903  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218881, rend_intergenic: 210857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 51257, rend_intergenic: 51254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 221460
-exon list size: 828


building trellis

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40.0    
40.1    
40.2    
40.4    
40.5    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.3    
41.4    
41.6    
41.7    
41.8    
41.9    
42.0    
42.2    
42.3    
42.4    
42.5    
42.7    
42.8    
42.9    
43.0    
43.1    
43.3    
43.4    
43.5    
43.6    
43.7    
43.9    
44.0    
44.1    
44.2    
44.3    
44.5    
44.6    
44.7    
44.8    
44.9    
45.1    
45.2    
45.3    
45.4    
45.5    
45.7    
45.8    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.6    
46.7    
46.9    
47.0    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.8    
48.0    
48.1    
48.2    
48.3    
48.4    
48.6    
48.7    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.3    
51.4    
51.6    
51.7    
51.8    
51.9    
52.0    
52.2    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.0    
53.1    
53.3    
53.4    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.2    
54.3    
54.5    
54.6    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.1    
56.3    
56.4    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.2    
57.3    
57.5    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.6    
59.8    
59.9    
60.0    
60.1    
60.2    
60.4    
60.5    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.3    
61.4    
61.6    
61.7    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.5    
62.7    
62.8    
62.9    
63.0    
63.1    
63.3    
63.4    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.4    
65.5    
65.7    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.6    
66.7    
66.9    
67.0    
67.1    
67.2    
67.3    
67.5    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.4    
68.6    
68.7    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.0    
72.2    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.5    
75.7    
75.8    
75.9    
76.0    
76.1    
76.3    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.6    
79.8    
79.9    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.8    
81.0    
81.1    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.0    
83.1    
83.3    
83.4    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.8    
84.9    
85.1    
85.2    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.3    
91.4    
91.6    
91.7    
91.8    
91.9    
92.0    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.6    
93.7    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.6    
96.7    
96.9    
97.0    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.8    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 38 predictions from path traversal
Error with prediction: snap lend_intergenic: 22739, rend_intergenic: 16335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41544, rend_intergenic: 28245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42314, rend_intergenic: 42113  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49980, rend_intergenic: 43582  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56878, rend_intergenic: 50310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75641, rend_intergenic: 73047  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88933, rend_intergenic: 84773  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101076, rend_intergenic: 97381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136024, rend_intergenic: 125725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139831, rend_intergenic: 137847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145476, rend_intergenic: 141157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165291, rend_intergenic: 151613  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193139, rend_intergenic: 174903  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218881, rend_intergenic: 210857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 51257, rend_intergenic: 51254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support