-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_23/scaffold_23_4082075-4290901 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Couldn't classify 188384, 188504 Sorry, prediction pasa_asmbl_31255.p1 fails validation. (GTG) CT 188384-188504 GT AGG (GTG) AG 188635-188855 GT AGG (ATG) AG 189334-189369 GT TGG (ATT) AG 189619-189776 GT GCG (TAA) AG 190296-190467 GT TGG (GAG) AG 190965-191015 GT ATG (GAC) AG 191430-191549 AC GAA -recovered pasa_asmbl_31255.p1, initial, 189334, 189369 -recovered pasa_asmbl_31255.p1, terminal, 191430, 191549 -recovered pasa_asmbl_31255.p1, internal, 188635, 188855 -recovered pasa_asmbl_31255.p1, internal, 189334, 189369 -recovered pasa_asmbl_31255.p1, internal, 189619, 189776 -recovered pasa_asmbl_31255.p1, internal, 190296, 190467 -recovered pasa_asmbl_31255.p1, internal, 190965, 191015 Valid prediction for snap_scaffold_23-snap.784-T1 Valid prediction for GeneMark_model.90493_t Valid prediction for snap_scaffold_23-snap.810-T1 Valid prediction for GeneMark_model.90491_t Valid prediction for GeneMark_model.90448_t Valid prediction for GlimmerHMM_glimmerT_52100-T1 Valid prediction for GeneMark_model.90469_t Valid prediction for GlimmerHMM_glimmerT_52116-T1 Valid prediction for GeneMark_model.90465_t Valid prediction for HiQ_model.g35027.t1 Valid prediction for HiQ_model.g35029.t1 Valid prediction for HiQ_model.g35023.t1 Valid prediction for snap_scaffold_23-snap.780-T1 Valid prediction for GlimmerHMM_glimmerT_52127-T1 Valid prediction for GlimmerHMM_glimmerT_52114-T1 Valid prediction for GlimmerHMM_glimmerT_52126-T1 Valid prediction for GeneMark_model.90489_t Valid prediction for CodingQuarry_transcript_35556-T1 Valid prediction for GeneMark_model.90472_t Valid prediction for Augustus_model.g35019.t1 Valid prediction for Augustus_model.g35039.t1 Valid prediction for snap_scaffold_23-snap.798-T1 Valid prediction for GlimmerHMM_glimmerT_52099-T1 Valid prediction for snap_scaffold_23-snap.796-T1 Valid prediction for GeneMark_model.90454_t Valid prediction for GeneMark_model.90470_t Valid prediction for GeneMark_model.90450_t Valid prediction for GeneMark_model.90497_t Valid prediction for GeneMark_model.90466_t Valid prediction for snap_scaffold_23-snap.795-T1 Valid prediction for GeneMark_model.90496_t Valid prediction for snap_scaffold_23-snap.785-T1 Valid prediction for snap_scaffold_23-snap.814-T1 Valid prediction for GlimmerHMM_glimmerT_52115-T1 Valid prediction for GeneMark_model.90494_t Valid prediction for GeneMark_model.90459_t Valid prediction for pasa_asmbl_30784.p1 Valid prediction for GeneMark_model.90453_t Valid prediction for snap_scaffold_23-snap.788-T1 Valid prediction for snap_scaffold_23-snap.809-T1 Valid prediction for GeneMark_model.90457_t Valid prediction for snap_scaffold_23-snap.811-T1 Valid prediction for Augustus_model.g35032.t1 Valid prediction for snap_scaffold_23-snap.790-T1 Valid prediction for snap_scaffold_23-snap.813-T1 Valid prediction for HiQ_model.g35020.t1 Valid prediction for GeneMark_model.90478_t Valid prediction for GlimmerHMM_glimmerT_52112-T1 Valid prediction for GeneMark_model.90487_t Valid prediction for GeneMark_model.90475_t Couldn't classify 76507, 76548 Sorry, prediction pasa_asmbl_30788.p1 fails validation. (AAA) CG 76507-76548 GT CGG (ACT) AG 76672-76752 GT AGG (AAT) AG 76920-77031 GT CAG (GTA) AG 77240-77523 GG GAG -recovered pasa_asmbl_30788.p1, terminal, 77240, 77523 -recovered pasa_asmbl_30788.p1, internal, 76672, 76752 -recovered pasa_asmbl_30788.p1, internal, 76920, 77031 Valid prediction for GeneMark_model.90480_t Valid prediction for GeneMark_model.90482_t Valid prediction for snap_scaffold_23-snap.792-T1 Couldn't classify 99235, 100152 Sorry, prediction pasa_asmbl_30795.p1 fails validation. (AGC) GA 99235-100152 GT GAG Valid prediction for HiQ_model.g35040.t1 Valid prediction for snap_scaffold_23-snap.815-T1 Valid prediction for GeneMark_model.90452_t Valid prediction for snap_scaffold_23-snap.812-T1 Valid prediction for Augustus_model.g35041.t1 Valid prediction for pasa_asmbl_30786.p1 Valid prediction for GlimmerHMM_glimmerT_52118-T1 Valid prediction for snap_scaffold_23-snap.794-T1 Valid prediction for snap_scaffold_23-snap.783-T1 Couldn't classify 83777, 83818 Sorry, prediction pasa_asmbl_30793.p1 fails validation. (GGA) GG 83777-83818 GT CAG (GTT) AG 84525-84824 GC AGG (GAG) AG 84941-85039 GT CGG (GAT) AG 85196-85366 GC AGG (GAC) AG 85592-85663 GT AGG (ATC) AG 85753-85873 GT AGG (GTC) AG 86042-86174 GT AGG (GGG) AG 86261-86363 GT AGG (GGT) AG 86582-86947 GT AGG (TTG) AG 87143-87226 GT AGG (AGG) AG 87883-87969 AT GAA -recovered pasa_asmbl_30793.p1, terminal, 87883, 87969 -recovered pasa_asmbl_30793.p1, internal, 84525, 84824 -recovered pasa_asmbl_30793.p1, internal, 84941, 85039 -recovered pasa_asmbl_30793.p1, internal, 85196, 85366 -recovered pasa_asmbl_30793.p1, internal, 85592, 85663 -recovered pasa_asmbl_30793.p1, internal, 85753, 85873 -recovered pasa_asmbl_30793.p1, internal, 86042, 86174 -recovered pasa_asmbl_30793.p1, internal, 86261, 86363 -recovered pasa_asmbl_30793.p1, internal, 86582, 86947 -recovered pasa_asmbl_30793.p1, internal, 87143, 87226 Valid prediction for GeneMark_model.90492_t Valid prediction for GeneMark_model.90461_t Valid prediction for CodingQuarry_transcript_35558-T1 Valid prediction for snap_scaffold_23-snap.802-T1 Valid prediction for GlimmerHMM_glimmerT_52106-T1 Valid prediction for GeneMark_model.90474_t Valid prediction for snap_scaffold_23-snap.806-T1 Valid prediction for GlimmerHMM_glimmerT_52125-T1 Valid prediction for Augustus_model.g35030.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 61195, 61240 Couldn't classify 62327, 62423 Sorry, prediction CodingQuarry_transcript_35563-T1 fails validation. (ATG) AA 58632-58685 GT AGG (TTT) AG 59037-59112 GT AGG (CTC) AG 61195-61240 AT GTA (CAC) GT 62327-62423 GT AGG (CAT) AG 62581-62643 GT AGG (GTG) AG 63026-63214 GT AGG (CTG) AG 63390-63485 GT AGG (ACA) AG 63618-63678 GT TAG (CTC) AG 63788-63871 GT AGG (CCA) AG 64010-64116 GT TGG (ATC) AG 64350-64489 GT AGG (GTG) AG 64806-64975 GT ATG (ATG) AG 65467-65573 GG GAG -recovered CodingQuarry_transcript_35563-T1, initial, 58632, 58685 -recovered CodingQuarry_transcript_35563-T1, terminal, 65467, 65573 -recovered CodingQuarry_transcript_35563-T1, internal, 59037, 59112 -recovered CodingQuarry_transcript_35563-T1, internal, 62581, 62643 -recovered CodingQuarry_transcript_35563-T1, internal, 63026, 63214 -recovered CodingQuarry_transcript_35563-T1, internal, 63390, 63485 -recovered CodingQuarry_transcript_35563-T1, internal, 63618, 63678 -recovered CodingQuarry_transcript_35563-T1, internal, 63788, 63871 -recovered CodingQuarry_transcript_35563-T1, internal, 64010, 64116 -recovered CodingQuarry_transcript_35563-T1, internal, 64350, 64489 -recovered CodingQuarry_transcript_35563-T1, internal, 64806, 64975 Valid prediction for pasa_asmbl_31547.p1 Valid prediction for GeneMark_model.90471_t Couldn't classify 110533, 110613 Sorry, prediction pasa_asmbl_31563.p1 fails validation. (ACT) AA 110533-110613 GT TGG (GCA) AG 111183-111260 GT AGG (TTC) AG 111616-111729 GT AGG (GTG) AG 112021-112150 GT AGG (GCG) AG 112247-112308 AA AAA -recovered pasa_asmbl_31563.p1, terminal, 112247, 112308 -recovered pasa_asmbl_31563.p1, internal, 111183, 111260 -recovered pasa_asmbl_31563.p1, internal, 111616, 111729 -recovered pasa_asmbl_31563.p1, internal, 112021, 112150 Valid prediction for GlimmerHMM_glimmerT_52107-T1 Valid prediction for GeneMark_model.90462_t Valid prediction for GlimmerHMM_glimmerT_52123-T1 Valid prediction for GlimmerHMM_glimmerT_52109-T1 Valid prediction for GeneMark_model.90463_t Couldn't classify 45386, 46534 Sorry, prediction pasa_asmbl_31578.p1 fails validation. (CCC) TA 45386-46534 CC GGC Valid prediction for GeneMark_model.90449_t Valid prediction for GeneMark_model.90485_t Valid prediction for GeneMark_model.90488_t Valid prediction for GlimmerHMM_glimmerT_52101-T1 Valid prediction for GeneMark_model.90467_t Valid prediction for CodingQuarry_transcript_35561-T1 Valid prediction for GeneMark_model.90456_t Valid prediction for GeneMark_model.90490_t Valid prediction for GlimmerHMM_glimmerT_52124-T1 Valid prediction for Augustus_model.g35038.t1 Valid prediction for Augustus_model.g35033.t1 Couldn't classify 99372, 99488 Sorry, prediction pasa_asmbl_31925.p1 fails validation. (TAT) AG 99372-99488 GT AGG (GAA) AG 99817-100041 TG GAT -recovered pasa_asmbl_31925.p1, terminal, 99817, 100041 -recovered pasa_asmbl_31925.p1, internal, 99372, 99488 Valid prediction for CodingQuarry_transcript_35557-T1 Valid prediction for CodingQuarry_transcript_35562-T1 Valid prediction for snap_scaffold_23-snap.799-T1 Valid prediction for GeneMark_model.90460_t Couldn't classify 185484, 185553 Sorry, prediction pasa_asmbl_31556.p1 fails validation. (ATG) CG 181396-181445 GT AGG (CGA) AG 181864-181978 GT AGG (GTG) AG 182266-182468 GT AGG (TTA) AG 182818-182986 GT AGG (ATG) AG 183636-183854 GT AGG (GGT) AG 183947-184162 GT AGG (TCG) AG 184476-184559 GT GGG (CCG) AG 184847-185021 GT AGG (GTA) AG 185112-185253 GT AGG (ACC) AG 185484-185553 TC CCT -recovered pasa_asmbl_31556.p1, initial, 181396, 181445 -recovered pasa_asmbl_31556.p1, initial, 183636, 183854 -recovered pasa_asmbl_31556.p1, internal, 181864, 181978 -recovered pasa_asmbl_31556.p1, internal, 182266, 182468 -recovered pasa_asmbl_31556.p1, internal, 182818, 182986 -recovered pasa_asmbl_31556.p1, internal, 183636, 183854 -recovered pasa_asmbl_31556.p1, internal, 183947, 184162 -recovered pasa_asmbl_31556.p1, internal, 184476, 184559 -recovered pasa_asmbl_31556.p1, internal, 184847, 185021 -recovered pasa_asmbl_31556.p1, internal, 185112, 185253 Valid prediction for CodingQuarry_transcript_35560-T1 Valid prediction for snap_scaffold_23-snap.781-T1 Valid prediction for snap_scaffold_23-snap.804-T1 Valid prediction for HiQ_model.g35021.t1 Valid prediction for GlimmerHMM_glimmerT_52113-T1 Valid prediction for pasa_asmbl_31559.p1 Couldn't classify 58593, 58685 Sorry, prediction pasa_asmbl_31568.p1 fails validation. (TGG) AC 58593-58685 GT AGG (TTT) AG 59037-59112 GT AGG (CTC) AG 61195-61238 GT AGG (CAT) AG 62581-62643 GT AGG (GTG) AG 63026-63214 GT AGG (CTG) AG 63390-63485 GT AGG (ACA) AG 63618-63678 GT TAG (CTC) AG 63788-63871 GT AGG (CCA) AG 64010-64191 CT AGC -recovered pasa_asmbl_31568.p1, terminal, 64010, 64191 -recovered pasa_asmbl_31568.p1, internal, 59037, 59112 -recovered pasa_asmbl_31568.p1, internal, 61195, 61238 -recovered pasa_asmbl_31568.p1, internal, 62581, 62643 -recovered pasa_asmbl_31568.p1, internal, 63026, 63214 -recovered pasa_asmbl_31568.p1, internal, 63390, 63485 -recovered pasa_asmbl_31568.p1, internal, 63618, 63678 -recovered pasa_asmbl_31568.p1, internal, 63788, 63871 Valid prediction for GeneMark_model.90473_t Valid prediction for GlimmerHMM_glimmerT_52119-T1 Valid prediction for snap_scaffold_23-snap.808-T1 Valid prediction for HiQ_model.g35028.t1 Couldn't classify 85326, 85760 Sorry, prediction pasa_asmbl_31565.p1 fails validation. (CCG) AC 85326-85760 GT TGG (GTG) AG 85967-86301 GT AGG (CGA) AG 86511-86687 GT AGG (GTC) AG 86865-87022 GT AGG (GTA) AG 87089-87232 GT CAG (TGG) AG 87353-87511 GT GGG (AGG) AG 88203-88372 GT AGG (GGG) AG 88460-88556 GT TGG (TGC) AG 88765-88895 GT GAG (GTG) AG 89001-89127 GT AGG (GTG) AG 89965-90014 TG AGT -recovered pasa_asmbl_31565.p1, terminal, 89965, 90014 -recovered pasa_asmbl_31565.p1, internal, 85967, 86301 -recovered pasa_asmbl_31565.p1, internal, 86511, 86687 -recovered pasa_asmbl_31565.p1, internal, 86865, 87022 -recovered pasa_asmbl_31565.p1, internal, 87089, 87232 -recovered pasa_asmbl_31565.p1, internal, 87353, 87511 -recovered pasa_asmbl_31565.p1, internal, 88203, 88372 -recovered pasa_asmbl_31565.p1, internal, 88460, 88556 -recovered pasa_asmbl_31565.p1, internal, 88765, 88895 -recovered pasa_asmbl_31565.p1, internal, 89001, 89127 Valid prediction for GlimmerHMM_glimmerT_52117-T1 Valid prediction for GlimmerHMM_glimmerT_52111-T1 Valid prediction for GeneMark_model.90455_t Valid prediction for GlimmerHMM_glimmerT_52103-T1 Valid prediction for GeneMark_model.90458_t Valid prediction for GlimmerHMM_glimmerT_52110-T1 Valid prediction for snap_scaffold_23-snap.816-T1 Valid prediction for snap_scaffold_23-snap.800-T1 Valid prediction for Augustus_model.g35042.t1 Valid prediction for HiQ_model.g35034.t1 Valid prediction for snap_scaffold_23-snap.782-T1 Valid prediction for CodingQuarry_transcript_35553-T1 Couldn't classify 125946, 125972 Sorry, prediction pasa_asmbl_31561.p1 fails validation. (GAT) GA 125946-125972 GT CTG (TTT) AG 126118-126321 GT AGG (TAT) AG 126679-126744 GT TGG (GTG) AG 126878-126976 GT TAG (TTG) AG 127826-127993 GT AGG (GAC) AG 128074-128156 GT AGG (GTG) AG 128462-128580 GT CGG (GCC) AG 128737-128840 GT AGG (GCG) AG 128927-129028 GT TGG (GCG) AG 129133-129243 GT CTG (CAA) AG 129402-129509 GT AGG (TCA) AG 129661-129813 CC AAC -recovered pasa_asmbl_31561.p1, terminal, 129661, 129813 -recovered pasa_asmbl_31561.p1, internal, 126118, 126321 -recovered pasa_asmbl_31561.p1, internal, 126679, 126744 -recovered pasa_asmbl_31561.p1, internal, 126878, 126976 -recovered pasa_asmbl_31561.p1, internal, 127826, 127993 -recovered pasa_asmbl_31561.p1, internal, 128074, 128156 -recovered pasa_asmbl_31561.p1, internal, 128462, 128580 -recovered pasa_asmbl_31561.p1, internal, 128737, 128840 -recovered pasa_asmbl_31561.p1, internal, 128927, 129028 -recovered pasa_asmbl_31561.p1, internal, 129133, 129243 -recovered pasa_asmbl_31561.p1, internal, 129402, 129509 Valid prediction for snap_scaffold_23-snap.791-T1 Valid prediction for snap_scaffold_23-snap.787-T1 Valid prediction for snap_scaffold_23-snap.803-T1 Valid prediction for GlimmerHMM_glimmerT_52128-T1 Valid prediction for GeneMark_model.90476_t Valid prediction for Augustus_model.g35035.t1 Couldn't classify 185952, 186057 Sorry, prediction pasa_asmbl_31554.p1 fails validation. (TCC) AG 185952-186057 GT GAG (TCA) AG 186479-186636 GT AGG (TGT) AG 187158-187225 GT AAG (CAA) AG 187331-187399 GT AAG (TTC) AG 187703-187944 GT AGG (GTG) AG 188179-188297 GT AGG (ATG) AG 189674-189856 GT ACG (CTT) AG 191188-191295 GA GAG -recovered pasa_asmbl_31554.p1, initial, 189674, 189856 -recovered pasa_asmbl_31554.p1, terminal, 191188, 191295 -recovered pasa_asmbl_31554.p1, internal, 185952, 186057 -recovered pasa_asmbl_31554.p1, internal, 186479, 186636 -recovered pasa_asmbl_31554.p1, internal, 187158, 187225 -recovered pasa_asmbl_31554.p1, internal, 187331, 187399 -recovered pasa_asmbl_31554.p1, internal, 187703, 187944 -recovered pasa_asmbl_31554.p1, internal, 188179, 188297 -recovered pasa_asmbl_31554.p1, internal, 189674, 189856 Valid prediction for GlimmerHMM_glimmerT_52102-T1 Valid prediction for GlimmerHMM_glimmerT_52104-T1 Valid prediction for Augustus_model.g35022.t1 Valid prediction for GlimmerHMM_glimmerT_52108-T1 Couldn't classify 143915, 144017 Couldn't classify 146341, 146366 Sorry, prediction pasa_asmbl_31558.p1 fails validation. (CCC) AG 143915-144017 GT CGG (GCT) AG 144184-144267 GT TGG (GTG) AG 144477-144571 GT ATG (TTT) AG 144843-144965 GT GCG (CAA) AG 145313-145396 GT AGG (GGG) AG 145665-145707 GT GGG (TGG) AG 146341-146366 GC CAG -recovered pasa_asmbl_31558.p1, internal, 143915, 144017 -recovered pasa_asmbl_31558.p1, internal, 144184, 144267 -recovered pasa_asmbl_31558.p1, internal, 144477, 144571 -recovered pasa_asmbl_31558.p1, internal, 144843, 144965 -recovered pasa_asmbl_31558.p1, internal, 145313, 145396 -recovered pasa_asmbl_31558.p1, internal, 145665, 145707 -recovered pasa_asmbl_31558.p1, internal, 146341, 146366 Valid prediction for snap_scaffold_23-snap.807-T1 Valid prediction for HiQ_model.g35031.t1 Valid prediction for snap_scaffold_23-snap.797-T1 Valid prediction for Augustus_model.g35025.t1 Valid prediction for GeneMark_model.90481_t Valid prediction for GeneMark_model.90484_t Valid prediction for GeneMark_model.90486_t Valid prediction for HiQ_model.g35026.t1 Couldn't classify 51619, 51736 Couldn't classify 51846, 52033 Sorry, prediction pasa_asmbl_31920.p1 fails validation. (CTG) GC 51619-51736 GT AGG (GGA) AG 51846-52033 CT CCC Valid prediction for Augustus_model.g35036.t1 Valid prediction for GeneMark_model.90451_t Valid prediction for snap_scaffold_23-snap.793-T1 Valid prediction for GeneMark_model.90464_t Valid prediction for CodingQuarry_transcript_35555-T1 Valid prediction for snap_scaffold_23-snap.789-T1 Valid prediction for snap_scaffold_23-snap.805-T1 Valid prediction for GeneMark_model.90468_t Valid prediction for Augustus_model.g35024.t1 Valid prediction for snap_scaffold_23-snap.817-T1 Valid prediction for GlimmerHMM_glimmerT_52105-T1 Valid prediction for GlimmerHMM_glimmerT_52120-T1 Couldn't classify 52265, 52306 Sorry, prediction pasa_asmbl_31577.p1 fails validation. (GTA) CG 52265-52306 GT CCG (GAC) AG 52963-53067 GT AGG (ATG) AG 53267-53417 GT AGG (TGA) AG 53731-53811 GT AGG (ATG) AG 53937-54099 GT GGG (CGT) AG 54198-54303 GT AGG (GTG) AG 54962-55138 GT TGG (GTG) AG 55262-55420 AA AAA -recovered pasa_asmbl_31577.p1, initial, 53267, 53417 add_exon() Sorry, pasa_asmbl_31577.p1 53937-54099-initial-1 is invalid. -recovered pasa_asmbl_31577.p1, initial, 53937, 54099 -recovered pasa_asmbl_31577.p1, terminal, 55262, 55420 -recovered pasa_asmbl_31577.p1, internal, 52963, 53067 -recovered pasa_asmbl_31577.p1, internal, 53267, 53417 -recovered pasa_asmbl_31577.p1, internal, 53731, 53811 -recovered pasa_asmbl_31577.p1, internal, 53937, 54099 -recovered pasa_asmbl_31577.p1, internal, 54198, 54303 -recovered pasa_asmbl_31577.p1, internal, 54962, 55138 Couldn't classify 189638, 189856 Sorry, prediction pasa_asmbl_31551.p2 fails validation. (TGT) CC 189638-189856 GT ACG (CTT) AG 191188-191295 GA GAG -recovered pasa_asmbl_31551.p2, terminal, 191188, 191295 Valid prediction for GeneMark_model.90483_t Valid prediction for GlimmerHMM_glimmerT_52122-T1 Valid prediction for GlimmerHMM_glimmerT_52121-T1 Valid prediction for snap_scaffold_23-snap.786-T1 Valid prediction for HiQ_model.g35037.t1 Valid prediction for snap_scaffold_23-snap.801-T1 Valid prediction for GeneMark_model.90479_t Valid prediction for CodingQuarry_transcript_35554-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 30006, rend_intergenic: 18121 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43198, rend_intergenic: 39008 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66045, rend_intergenic: 60370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67114, rend_intergenic: 66255 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72739, rend_intergenic: 68102 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135197, rend_intergenic: 132628 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 208827 -exon list size: 715 building trellis 0.1 0.3 0.4 0.6 0.7 0.8 1.0 1.1 1.3 1.4 1.5 1.7 1.8 2.0 2.1 2.2 2.4 2.5 2.6 2.8 2.9 3.1 3.2 3.3 3.5 3.6 3.8 3.9 4.0 4.2 4.3 4.5 4.6 4.7 4.9 5.0 5.2 5.3 5.4 5.6 5.7 5.9 6.0 6.1 6.3 6.4 6.6 6.7 6.8 7.0 7.1 7.3 7.4 7.5 7.7 7.8 7.9 8.1 8.2 8.4 8.5 8.6 8.8 8.9 9.1 9.2 9.3 9.5 9.6 9.8 9.9 10.0 10.2 10.3 10.5 10.6 10.7 10.9 11.0 11.2 11.3 11.4 11.6 11.7 11.9 12.0 12.1 12.3 12.4 12.6 12.7 12.8 13.0 13.1 13.2 13.4 13.5 13.7 13.8 13.9 14.1 14.2 14.4 14.5 14.6 14.8 14.9 15.1 15.2 15.3 15.5 15.6 15.8 15.9 16.0 16.2 16.3 16.5 16.6 16.7 16.9 17.0 17.2 17.3 17.4 17.6 17.7 17.9 18.0 18.1 18.3 18.4 18.5 18.7 18.8 19.0 19.1 19.2 19.4 19.5 19.7 19.8 19.9 20.1 20.2 20.4 20.5 20.6 20.8 20.9 21.1 21.2 21.3 21.5 21.6 21.8 21.9 22.0 22.2 22.3 22.5 22.6 22.7 22.9 23.0 23.2 23.3 23.4 23.6 23.7 23.8 24.0 24.1 24.3 24.4 24.5 24.7 24.8 25.0 25.1 25.2 25.4 25.5 25.7 25.8 25.9 26.1 26.2 26.4 26.5 26.6 26.8 26.9 27.1 27.2 27.3 27.5 27.6 27.8 27.9 28.0 28.2 28.3 28.5 28.6 28.7 28.9 29.0 29.1 29.3 29.4 29.6 29.7 29.8 30.0 30.1 30.3 30.4 30.5 30.7 30.8 31.0 31.1 31.2 31.4 31.5 31.7 31.8 31.9 32.1 32.2 32.4 32.5 32.6 32.8 32.9 33.1 33.2 33.3 33.5 33.6 33.8 33.9 34.0 34.2 34.3 34.4 34.6 34.7 34.9 35.0 35.1 35.3 35.4 35.6 35.7 35.8 36.0 36.1 36.3 36.4 36.5 36.7 36.8 37.0 37.1 37.2 37.4 37.5 37.7 37.8 37.9 38.1 38.2 38.4 38.5 38.6 38.8 38.9 39.1 39.2 39.3 39.5 39.6 39.7 39.9 40.0 40.2 40.3 40.4 40.6 40.7 40.9 41.0 41.1 41.3 41.4 41.6 41.7 41.8 42.0 42.1 42.3 42.4 42.5 42.7 42.8 43.0 43.1 43.2 43.4 43.5 43.7 43.8 43.9 44.1 44.2 44.4 44.5 44.6 44.8 44.9 45.0 45.2 45.3 45.5 45.6 45.7 45.9 46.0 46.2 46.3 46.4 46.6 46.7 46.9 47.0 47.1 47.3 47.4 47.6 47.7 47.8 48.0 48.1 48.3 48.4 48.5 48.7 48.8 49.0 49.1 49.2 49.4 49.5 49.7 49.8 49.9 50.1 50.2 50.3 50.5 50.6 50.8 50.9 51.0 51.2 51.3 51.5 51.6 51.7 51.9 52.0 52.2 52.3 52.4 52.6 52.7 52.9 53.0 53.1 53.3 53.4 53.6 53.7 53.8 54.0 54.1 54.3 54.4 54.5 54.7 54.8 55.0 55.1 55.2 55.4 55.5 55.6 55.8 55.9 56.1 56.2 56.3 56.5 56.6 56.8 56.9 57.0 57.2 57.3 57.5 57.6 57.7 57.9 58.0 58.2 58.3 58.4 58.6 58.7 58.9 59.0 59.1 59.3 59.4 59.6 59.7 59.8 60.0 60.1 60.3 60.4 60.5 60.7 60.8 60.9 61.1 61.2 61.4 61.5 61.6 61.8 61.9 62.1 62.2 62.3 62.5 62.6 62.8 62.9 63.0 63.2 63.3 63.5 63.6 63.7 63.9 64.0 64.2 64.3 64.4 64.6 64.7 64.9 65.0 65.1 65.3 65.4 65.6 65.7 65.8 66.0 66.1 66.2 66.4 66.5 66.7 66.8 66.9 67.1 67.2 67.4 67.5 67.6 67.8 67.9 68.1 68.2 68.3 68.5 68.6 68.8 68.9 69.0 69.2 69.3 69.5 69.6 69.7 69.9 70.0 70.2 70.3 70.4 70.6 70.7 70.9 71.0 71.1 71.3 71.4 71.5 71.7 71.8 72.0 72.1 72.2 72.4 72.5 72.7 72.8 72.9 73.1 73.2 73.4 73.5 73.6 73.8 73.9 74.1 74.2 74.3 74.5 74.6 74.8 74.9 75.0 75.2 75.3 75.5 75.6 75.7 75.9 76.0 76.2 76.3 76.4 76.6 76.7 76.8 77.0 77.1 77.3 77.4 77.5 77.7 77.8 78.0 78.1 78.2 78.4 78.5 78.7 78.8 78.9 79.1 79.2 79.4 79.5 79.6 79.8 79.9 80.1 80.2 80.3 80.5 80.6 80.8 80.9 81.0 81.2 81.3 81.5 81.6 81.7 81.9 82.0 82.1 82.3 82.4 82.6 82.7 82.8 83.0 83.1 83.3 83.4 83.5 83.7 83.8 84.0 84.1 84.2 84.4 84.5 84.7 84.8 84.9 85.1 85.2 85.4 85.5 85.6 85.8 85.9 86.1 86.2 86.3 86.5 86.6 86.8 86.9 87.0 87.2 87.3 87.4 87.6 87.7 87.9 88.0 88.1 88.3 88.4 88.6 88.7 88.8 89.0 89.1 89.3 89.4 89.5 89.7 89.8 90.0 90.1 90.2 90.4 90.5 90.7 90.8 90.9 91.1 91.2 91.4 91.5 91.6 91.8 91.9 92.1 92.2 92.3 92.5 92.6 92.7 92.9 93.0 93.2 93.3 93.4 93.6 93.7 93.9 94.0 94.1 94.3 94.4 94.6 94.7 94.8 95.0 95.1 95.3 95.4 95.5 95.7 95.8 96.0 96.1 96.2 96.4 96.5 96.7 96.8 96.9 97.1 97.2 97.4 97.5 97.6 97.8 97.9 98.0 98.2 98.3 98.5 98.6 98.7 98.9 99.0 99.2 99.3 99.4 99.6 99.7 99.9 -found 30 predictions from path traversal Error with prediction: snap lend_intergenic: 30006, rend_intergenic: 18121 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43198, rend_intergenic: 39008 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66045, rend_intergenic: 60370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67114, rend_intergenic: 66255 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72739, rend_intergenic: 68102 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135197, rend_intergenic: 132628 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 26 predictions persist after filtering for low support