-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_23/scaffold_23_3356543-3619322 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_23-snap.664-T1 Valid prediction for GeneMark_model.90378_t Valid prediction for GeneMark_model.90327_t Couldn't classify 212378, 212548 Sorry, prediction pasa_asmbl_30748.p1 fails validation. (TCT) TC 212378-212548 GT AGG (GAA) AG 213021-213178 GT AGG (GGA) AG 213740-213884 GT TGG (ACC) AG 214092-214283 GT AGG (ACA) AG 214535-214626 GT AGG (CTC) AG 214888-215007 GT AGG (GTC) AG 215629-215807 GT GGG (GGG) AG 215935-216053 GT CTG (CTC) AG 216975-217048 GT AGG (CCA) AG 218388-218439 GT AGG (AGT) AG 218584-218736 GT AGG (AGC) AG 219008-219049 AT AGA -recovered pasa_asmbl_30748.p1, terminal, 219008, 219049 -recovered pasa_asmbl_30748.p1, internal, 213021, 213178 -recovered pasa_asmbl_30748.p1, internal, 213740, 213884 -recovered pasa_asmbl_30748.p1, internal, 214092, 214283 -recovered pasa_asmbl_30748.p1, internal, 214535, 214626 -recovered pasa_asmbl_30748.p1, internal, 214888, 215007 -recovered pasa_asmbl_30748.p1, internal, 215629, 215807 -recovered pasa_asmbl_30748.p1, internal, 215935, 216053 -recovered pasa_asmbl_30748.p1, internal, 216975, 217048 -recovered pasa_asmbl_30748.p1, internal, 218388, 218439 -recovered pasa_asmbl_30748.p1, internal, 218584, 218736 Valid prediction for Augustus_model.g34958.t1 Valid prediction for snap_scaffold_23-snap.679-T1 Valid prediction for GlimmerHMM_glimmerT_52024-T1 Valid prediction for GeneMark_model.90381_t Valid prediction for GlimmerHMM_glimmerT_52038-T1 Valid prediction for snap_scaffold_23-snap.659-T1 Valid prediction for snap_scaffold_23-snap.686-T1 Valid prediction for Augustus_model.g34978.t1 Valid prediction for HiQ_model.g34977.t1 Valid prediction for snap_scaffold_23-snap.680-T1 Valid prediction for snap_scaffold_23-snap.668-T1 Valid prediction for GeneMark_model.90382_t Valid prediction for GlimmerHMM_glimmerT_52027-T1 Valid prediction for snap_scaffold_23-snap.712-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for Augustus_model.g34975.t1 Valid prediction for GeneMark_model.90356_t Valid prediction for GlimmerHMM_glimmerT_52045-T1 Valid prediction for Augustus_model.g34963.t1 Valid prediction for snap_scaffold_23-snap.669-T1 Valid prediction for Augustus_model.g34972.t1 Couldn't classify 148635, 148762 Couldn't classify 150759, 150989 Sorry, prediction pasa_asmbl_30741.p1 fails validation. (GTT) TT 148635-148762 GT AGG (TCC) AG 148983-149054 GT GGG (CCG) AG 149432-149567 GT GAG (ACC) AG 149691-149819 GT AGG (TTC) AG 150759-150989 TG CGT -recovered pasa_asmbl_30741.p1, internal, 148983, 149054 -recovered pasa_asmbl_30741.p1, internal, 149432, 149567 -recovered pasa_asmbl_30741.p1, internal, 149691, 149819 Valid prediction for snap_scaffold_23-snap.666-T1 Valid prediction for GeneMark_model.90364_t Valid prediction for GeneMark_model.90325_t Valid prediction for GeneMark_model.90354_t Couldn't classify 250093, 250218 Sorry, prediction pasa_asmbl_30757.p1 fails validation. (GGG) TG 250093-250218 GT ACG (ATC) AG 250489-250596 GT AGG (GTG) AG 250743-250862 GT AGG (GGG) AG 250991-251101 GT AGG (CAT) AG 251197-251325 CA GAC -recovered pasa_asmbl_30757.p1, terminal, 251197, 251325 -recovered pasa_asmbl_30757.p1, internal, 250489, 250596 -recovered pasa_asmbl_30757.p1, internal, 250743, 250862 -recovered pasa_asmbl_30757.p1, internal, 250991, 251101 Valid prediction for snap_scaffold_23-snap.717-T1 Valid prediction for snap_scaffold_23-snap.705-T1 Valid prediction for GeneMark_model.90374_t Valid prediction for GlimmerHMM_glimmerT_52013-T1 Valid prediction for GeneMark_model.90335_t Valid prediction for HiQ_model.g34985.t1 Valid prediction for CodingQuarry_transcript_35542-T1 Valid prediction for snap_scaffold_23-snap.661-T1 Valid prediction for GlimmerHMM_glimmerT_52014-T1 Valid prediction for snap_scaffold_23-snap.675-T1 Valid prediction for snap_scaffold_23-snap.708-T1 Couldn't classify 73203, 73289 Sorry, prediction pasa_asmbl_30737.p1 fails validation. (GGT) GG 73203-73289 GT TTG (GGG) AG 73549-73637 GT TGG (GCC) AG 73767-73830 GT ATG (TGC) AG 75364-75455 GT AGG (AAT) AG 77055-77132 GT AGG (TGG) AG 77779-77894 GT AGG (GTT) AG 78565-78655 GT AGG (TTC) AG 78754-78837 GT AGG (CGG) AG 79881-79994 GT AGG (GAA) AG 80412-80459 GT CGG (GTC) AG 80838-80915 GT CGG (GTC) AG 81266-81385 GT TCG (GCG) AG 81587-81634 GT CAG (GAA) AG 81738-81806 GT GAG (AAC) AG 81967-82077 GT AAG (CTC) AG 82232-82310 GT AGG (AAG) AG 82494-82604 CC GAC -recovered pasa_asmbl_30737.p1, terminal, 82494, 82604 -recovered pasa_asmbl_30737.p1, internal, 73549, 73637 -recovered pasa_asmbl_30737.p1, internal, 73767, 73830 -recovered pasa_asmbl_30737.p1, internal, 75364, 75455 -recovered pasa_asmbl_30737.p1, internal, 77055, 77132 -recovered pasa_asmbl_30737.p1, internal, 77779, 77894 -recovered pasa_asmbl_30737.p1, internal, 78565, 78655 -recovered pasa_asmbl_30737.p1, internal, 78754, 78837 -recovered pasa_asmbl_30737.p1, internal, 79881, 79994 -recovered pasa_asmbl_30737.p1, internal, 80412, 80459 -recovered pasa_asmbl_30737.p1, internal, 80838, 80915 -recovered pasa_asmbl_30737.p1, internal, 81266, 81385 -recovered pasa_asmbl_30737.p1, internal, 81587, 81634 -recovered pasa_asmbl_30737.p1, internal, 81738, 81806 -recovered pasa_asmbl_30737.p1, internal, 81967, 82077 -recovered pasa_asmbl_30737.p1, internal, 82232, 82310 Valid prediction for snap_scaffold_23-snap.699-T1 Valid prediction for GlimmerHMM_glimmerT_52022-T1 Valid prediction for Augustus_model.g34971.t1 Valid prediction for GeneMark_model.90372_t Valid prediction for GlimmerHMM_glimmerT_52049-T1 Valid prediction for GeneMark_model.90368_t Valid prediction for Augustus_model.g34983.t1 Valid prediction for GeneMark_model.90345_t Couldn't classify 151171, 151303 Sorry, prediction pasa_asmbl_30742.p1 fails validation. (CGT) GT 151171-151303 GT TGG (GCG) AG 151396-152657 GT GAG -recovered pasa_asmbl_30742.p1, terminal, 151396, 152657 -recovered pasa_asmbl_30742.p1, internal, 151396, 152657 Valid prediction for snap_scaffold_23-snap.715-T1 Couldn't classify 234436, 234593 Sorry, prediction pasa_asmbl_30755.p1 fails validation. (GAG) AG 234436-234593 GT AGG (GGA) AG 235346-235493 GT TTG (GCG) AG 235586-235777 GT AGG (AAA) AG 236172-236263 GT AGG (CAA) AG 236657-236776 GT AGG (GTC) AG 238732-238910 GT AGG (GTG) AG 240527-240645 GT CGG (ACC) AG 240909-240982 GT CCG (GCA) AG 241101-241152 GT AGG (ACG) AG 241276-241428 GT AGG (ACC) AG 242422-242541 AG GAA -recovered pasa_asmbl_30755.p1, terminal, 242422, 242541 -recovered pasa_asmbl_30755.p1, internal, 234436, 234593 -recovered pasa_asmbl_30755.p1, internal, 235346, 235493 -recovered pasa_asmbl_30755.p1, internal, 235586, 235777 -recovered pasa_asmbl_30755.p1, internal, 236172, 236263 -recovered pasa_asmbl_30755.p1, internal, 236657, 236776 -recovered pasa_asmbl_30755.p1, internal, 238732, 238910 -recovered pasa_asmbl_30755.p1, internal, 240527, 240645 -recovered pasa_asmbl_30755.p1, internal, 240909, 240982 -recovered pasa_asmbl_30755.p1, internal, 241101, 241152 -recovered pasa_asmbl_30755.p1, internal, 241276, 241428 Valid prediction for CodingQuarry_transcript_35540-T1 Valid prediction for Augustus_model.g34968.t1 Valid prediction for GeneMark_model.90332_t Valid prediction for GlimmerHMM_glimmerT_52019-T1 Valid prediction for pasa_asmbl_30743.p1 Valid prediction for snap_scaffold_23-snap.697-T1 Valid prediction for snap_scaffold_23-snap.682-T1 Valid prediction for GeneMark_model.90322_t Valid prediction for GeneMark_model.90339_t Valid prediction for snap_scaffold_23-snap.677-T1 Valid prediction for snap_scaffold_23-snap.713-T1 Valid prediction for GlimmerHMM_glimmerT_52026-T1 Valid prediction for snap_scaffold_23-snap.688-T1 Valid prediction for GeneMark_model.90347_t Valid prediction for GlimmerHMM_glimmerT_52043-T1 Valid prediction for GeneMark_model.90376_t Valid prediction for GeneMark_model.90358_t Valid prediction for GeneMark_model.90370_t Valid prediction for snap_scaffold_23-snap.700-T1 Valid prediction for CodingQuarry_transcript_35546-T1 Valid prediction for GlimmerHMM_glimmerT_52051-T1 Couldn't classify 147845, 148058 Couldn't classify 148220, 148302 Sorry, prediction pasa_asmbl_31237.p1 fails validation. (GCC) AG 147845-148058 GT CAG (ATT) AG 148220-148302 AA TCA -recovered pasa_asmbl_31237.p1, internal, 147845, 148058 Valid prediction for GeneMark_model.90334_t Valid prediction for GeneMark_model.90360_t Valid prediction for GeneMark_model.90352_t Valid prediction for GeneMark_model.90341_t Valid prediction for snap_scaffold_23-snap.691-T1 Valid prediction for GlimmerHMM_glimmerT_52031-T1 Valid prediction for GeneMark_model.90337_t Valid prediction for snap_scaffold_23-snap.711-T1 Valid prediction for snap_scaffold_23-snap.710-T1 Valid prediction for snap_scaffold_23-snap.689-T1 Valid prediction for GeneMark_model.90353_t Valid prediction for Augustus_model.g34960.t1 Valid prediction for snap_scaffold_23-snap.716-T1 Valid prediction for snap_scaffold_23-snap.685-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_52016-T1 Valid prediction for Augustus_model.g34984.t1 Valid prediction for Augustus_model.g34986.t1 Valid prediction for GlimmerHMM_glimmerT_52030-T1 Valid prediction for snap_scaffold_23-snap.696-T1 Valid prediction for GeneMark_model.90343_t Valid prediction for GlimmerHMM_glimmerT_52021-T1 Valid prediction for snap_scaffold_23-snap.673-T1 Valid prediction for GlimmerHMM_glimmerT_52040-T1 Valid prediction for CodingQuarry_transcript_35545-T1 Valid prediction for GlimmerHMM_glimmerT_52052-T1 Valid prediction for snap_scaffold_23-snap.670-T1 Valid prediction for GeneMark_model.90350_t Valid prediction for snap_scaffold_23-snap.681-T1 Valid prediction for snap_scaffold_23-snap.714-T1 Valid prediction for HiQ_model.g34967.t1 Valid prediction for GlimmerHMM_glimmerT_52050-T1 Valid prediction for GeneMark_model.90367_t Valid prediction for GeneMark_model.90324_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_23-snap.676-T1 Valid prediction for Augustus_model.g34980.t1 Valid prediction for GlimmerHMM_glimmerT_52015-T1 Valid prediction for Augustus_model.g34987.t1 Valid prediction for snap_scaffold_23-snap.718-T1 Valid prediction for GeneMark_model.90359_t Valid prediction for GlimmerHMM_glimmerT_52023-T1 Valid prediction for GlimmerHMM_glimmerT_52048-T1 Valid prediction for snap_scaffold_23-snap.683-T1 Valid prediction for GlimmerHMM_glimmerT_52025-T1 Valid prediction for snap_scaffold_23-snap.687-T1 Valid prediction for snap_scaffold_23-snap.707-T1 Valid prediction for snap_scaffold_23-snap.692-T1 Valid prediction for GeneMark_model.90361_t Valid prediction for Augustus_model.g34962.t1 Valid prediction for snap_scaffold_23-snap.674-T1 Valid prediction for snap_scaffold_23-snap.658-T1 Valid prediction for snap_scaffold_23-snap.660-T1 Valid prediction for snap_scaffold_23-snap.709-T1 Valid prediction for snap_scaffold_23-snap.662-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_52044-T1 Valid prediction for GlimmerHMM_glimmerT_52032-T1 Valid prediction for GlimmerHMM_glimmerT_52041-T1 Valid prediction for CodingQuarry_transcript_35541-T1 Couldn't classify 53630, 53815 Sorry, prediction CodingQuarry_transcript_35544-T1 fails validation. (ATG) CA 51641-51680 GT AGG (AGC) AG 52084-53342 GC ATG (CAA) AT 53630-53815 TT AGT -recovered CodingQuarry_transcript_35544-T1, initial, 51641, 51680 -recovered CodingQuarry_transcript_35544-T1, internal, 52084, 53342 Valid prediction for GlimmerHMM_glimmerT_52047-T1 Valid prediction for GlimmerHMM_glimmerT_52034-T1 Valid prediction for GlimmerHMM_glimmerT_52046-T1 Valid prediction for snap_scaffold_23-snap.678-T1 Valid prediction for snap_scaffold_23-snap.694-T1 Valid prediction for HiQ_model.g34982.t1 Valid prediction for GeneMark_model.90342_t Valid prediction for snap_scaffold_23-snap.706-T1 Valid prediction for snap_scaffold_23-snap.671-T1 Valid prediction for snap_scaffold_23-snap.690-T1 Valid prediction for snap_scaffold_23-snap.698-T1 Valid prediction for Augustus_model.g34974.t1 Valid prediction for pasa_asmbl_31527.p1 Valid prediction for GlimmerHMM_glimmerT_52036-T1 Valid prediction for GeneMark_model.90355_t Valid prediction for snap_scaffold_23-snap.693-T1 Valid prediction for GlimmerHMM_glimmerT_52028-T1 Valid prediction for snap_scaffold_23-snap.684-T1 Valid prediction for GlimmerHMM_glimmerT_52018-T1 Valid prediction for GeneMark_model.90340_t Valid prediction for Augustus_model.g34961.t1 Valid prediction for CodingQuarry_transcript_35539-T1 Valid prediction for snap_scaffold_23-snap.665-T1 Valid prediction for HiQ_model.g34976.t1 Valid prediction for GeneMark_model.90323_t Valid prediction for GeneMark_model.90329_t Valid prediction for Augustus_model.g34981.t1 Valid prediction for snap_scaffold_23-snap.702-T1 Valid prediction for snap_scaffold_23-snap.667-T1 Valid prediction for GlimmerHMM_glimmerT_52017-T1 Valid prediction for GeneMark_model.90371_t Valid prediction for GeneMark_model.90326_t Valid prediction for GlimmerHMM_glimmerT_52020-T1 Valid prediction for GeneMark_model.90357_t Valid prediction for GeneMark_model.90346_t Valid prediction for GeneMark_model.90328_t Valid prediction for GeneMark_model.90383_t Valid prediction for GeneMark_model.90344_t Valid prediction for Augustus_model.g34969.t1 Valid prediction for GlimmerHMM_glimmerT_52035-T1 Valid prediction for GeneMark_model.90351_t Valid prediction for GeneMark_model.90333_t Valid prediction for GlimmerHMM_glimmerT_52029-T1 Valid prediction for Augustus_model.g34979.t1 Couldn't classify 6704, 6991 Sorry, prediction pasa_asmbl_31530.p1 fails validation. (TTG) GC 6704-6991 GT AGG (ATC) AG 7122-7307 GT AGG (GTT) AG 7506-7648 GT AGG (TGT) AG 7997-8103 GT AGG (GGC) AG 9297-9460 GT AGG (GTC) AG 9695-9782 GT AGG (GTC) AG 10150-10343 TC GAT -recovered pasa_asmbl_31530.p1, terminal, 10150, 10343 -recovered pasa_asmbl_31530.p1, internal, 7122, 7307 -recovered pasa_asmbl_31530.p1, internal, 7506, 7648 -recovered pasa_asmbl_31530.p1, internal, 7997, 8103 -recovered pasa_asmbl_31530.p1, internal, 9297, 9460 -recovered pasa_asmbl_31530.p1, internal, 9695, 9782 Valid prediction for GeneMark_model.90365_t Valid prediction for GlimmerHMM_glimmerT_52037-T1 Valid prediction for GeneMark_model.90348_t Valid prediction for snap_scaffold_23-snap.695-T1 Valid prediction for GeneMark_model.90331_t Valid prediction for GeneMark_model.90338_t Valid prediction for GlimmerHMM_glimmerT_52053-T1 Valid prediction for Augustus_model.g34966.t1 Valid prediction for snap_scaffold_23-snap.704-T1 Valid prediction for GeneMark_model.90379_t Valid prediction for GeneMark_model.90362_t Valid prediction for snap_scaffold_23-snap.663-T1 Valid prediction for GeneMark_model.90349_t Valid prediction for GeneMark_model.90373_t Valid prediction for Augustus_model.g34973.t1 Valid prediction for Augustus_model.g34964.t1 Couldn't classify 163776, 163919 Sorry, prediction pasa_asmbl_31515.p1 fails validation. (ACC) AG 163776-163919 GT GTG (GCC) AG 164009-164207 GT AGG (GTT) AG 164296-164340 GT TGG (GTA) AG 164462-164631 GT TCG (AAT) AG 165201-165330 GT AGG (AGT) AG 165436-165568 GT GGG (GAA) AG 165902-166244 TT GAT -recovered pasa_asmbl_31515.p1, terminal, 165902, 166244 -recovered pasa_asmbl_31515.p1, internal, 163776, 163919 -recovered pasa_asmbl_31515.p1, internal, 164009, 164207 -recovered pasa_asmbl_31515.p1, internal, 164296, 164340 -recovered pasa_asmbl_31515.p1, internal, 164462, 164631 -recovered pasa_asmbl_31515.p1, internal, 165201, 165330 -recovered pasa_asmbl_31515.p1, internal, 165436, 165568 Valid prediction for GeneMark_model.90363_t Valid prediction for GlimmerHMM_glimmerT_52039-T1 Valid prediction for GeneMark_model.90369_t Valid prediction for GeneMark_model.90366_t Valid prediction for pasa_asmbl_31522.p1 Valid prediction for Augustus_model.g34965.t1 Valid prediction for CodingQuarry_transcript_35543-T1 Valid prediction for GeneMark_model.90375_t Valid prediction for Augustus_model.g34970.t1 Valid prediction for GlimmerHMM_glimmerT_52033-T1 Valid prediction for Augustus_model.g34959.t1 Valid prediction for snap_scaffold_23-snap.672-T1 Valid prediction for GeneMark_model.90336_t Valid prediction for snap_scaffold_23-snap.701-T1 Valid prediction for GlimmerHMM_glimmerT_52042-T1 Valid prediction for snap_scaffold_23-snap.703-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4538, rend_intergenic: 4193 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 6887, rend_intergenic: 4916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 15093, rend_intergenic: 7088 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34248, rend_intergenic: 33809 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40074, rend_intergenic: 36722 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50269, rend_intergenic: 41426 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52559, rend_intergenic: 50485 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56155, rend_intergenic: 52900 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63436, rend_intergenic: 57294 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 70071, rend_intergenic: 66089 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72359, rend_intergenic: 70506 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103250, rend_intergenic: 98515 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107915, rend_intergenic: 105040 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121353, rend_intergenic: 109524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128111, rend_intergenic: 123425 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200441, rend_intergenic: 198586 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252636, rend_intergenic: 252438 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 262780 -exon list size: 986 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.3 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 44 predictions from path traversal Error with prediction: snap lend_intergenic: 4538, rend_intergenic: 4193 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 6887, rend_intergenic: 4916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 15093, rend_intergenic: 7088 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34248, rend_intergenic: 33809 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40074, rend_intergenic: 36722 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50269, rend_intergenic: 41426 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52559, rend_intergenic: 50485 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56155, rend_intergenic: 52900 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63436, rend_intergenic: 57294 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 70071, rend_intergenic: 66089 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72359, rend_intergenic: 70506 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103250, rend_intergenic: 98515 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107915, rend_intergenic: 105040 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121353, rend_intergenic: 109524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128111, rend_intergenic: 123425 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200441, rend_intergenic: 198586 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252636, rend_intergenic: 252438 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 27 predictions persist after filtering for low support