-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2268

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 896, 1263
Sorry, prediction GeneMark_model.110190_t fails validation.
(AGA)	 AG	896-1263	GT	GGG
-recovered GeneMark_model.110190_t, internal, 896, 1263

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 832, 923
Sorry, prediction Augustus_model.g42017.t1 fails validation.
(GTA)	 AG	832-923	GT	AGG
(GTA)	 AG	1055-1064	GT	ATG
(GTA)	 AG	1143-1146	CA	AAC
-recovered Augustus_model.g42017.t1, terminal, 1143, 1146
-recovered Augustus_model.g42017.t1, internal, 832, 923
-recovered Augustus_model.g42017.t1, internal, 1055, 1064

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1423
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support