-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2230

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 930, 1106
Sorry, prediction Augustus_model.g42004.t1 fails validation.
(GCG)	 AG	930-1106	GT	CTG
-recovered Augustus_model.g42004.t1, internal, 930, 1106

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 36, 65
Sorry, prediction GeneMark_model.110151_t fails validation.
(AGG)	 AG	36-65	GT	CAG
(ACA)	 AG	354-426	GT	TGG
(TCG)	 AG	449-519	GT	AAG
(AAG)	 AG	568-582	GT	AAG
(AGG)	 AG	620-628	GT	GAG
(AGA)	 AG	658-772	AG	AGA
-recovered GeneMark_model.110151_t, terminal, 658, 772
-recovered GeneMark_model.110151_t, internal, 36, 65
-recovered GeneMark_model.110151_t, internal, 354, 426
-recovered GeneMark_model.110151_t, internal, 449, 519
-recovered GeneMark_model.110151_t, internal, 568, 582
-recovered GeneMark_model.110151_t, internal, 620, 628
Couldn't classify 354, 582
Sorry, prediction snap_scaffold_2230-snap.1-T1 fails validation.
(ACA)	 AG	354-582	GT	AAG
-recovered snap_scaffold_2230-snap.1-T1, internal, 354, 582

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1457
-exon list size: 16


building trellis

5.6    
11.1    
16.7    
22.2    
27.8    
33.3    
38.9    
44.4    
50.0    
55.6    
61.1    
66.7    
72.2    
77.8    
83.3    
88.9    
94.4    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support