-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2224

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1324, 1452
Sorry, prediction GeneMark_model.110147_t fails validation.
(ATG)	 TG	1112-1134	GT	TCG
(AGA)	 AG	1324-1452	GC	GGG
-recovered GeneMark_model.110147_t, initial, 1112, 1134
-recovered GeneMark_model.110147_t, internal, 1324, 1452
Couldn't classify 255, 401
Sorry, prediction GeneMark_model.110145_t fails validation.
(AGA)	 AG	255-401	GT	AAG
(ACA)	 AG	441-456	AG	AGA
-recovered GeneMark_model.110145_t, terminal, 441, 456
-recovered GeneMark_model.110145_t, internal, 255, 401

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.110146_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1461
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support