-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2200

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 216, 312
Couldn't classify 1019, 1186
Sorry, prediction snap_scaffold_2200-snap.1-T1 fails validation.
(ACC)	 AG	216-312	GT	GCG
(GTG)	 AG	1019-1186	GT	TGG
-recovered snap_scaffold_2200-snap.1-T1, internal, 216, 312
-recovered snap_scaffold_2200-snap.1-T1, internal, 1019, 1186
Couldn't classify 639, 689
Couldn't classify 1067, 1163
Sorry, prediction GeneMark_model.110124_t fails validation.
(CAC)	 AG	639-689	GT	CGG
(CTG)	 AG	1067-1163	GT	TGG
-recovered GeneMark_model.110124_t, internal, 639, 689
-recovered GeneMark_model.110124_t, internal, 1067, 1163

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1480
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support