-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_22/scaffold_22_9145721-9400158

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_51233-T1
Valid prediction for Augustus_model.g34342.t1
Valid prediction for GeneMark_model.88962_t
Valid prediction for snap_scaffold_22-snap.1935-T1
Valid prediction for GeneMark_model.88941_t
Valid prediction for GlimmerHMM_glimmerT_51215-T1
Valid prediction for GeneMark_model.88959_t
Valid prediction for GeneMark_model.88926_t
Valid prediction for GlimmerHMM_glimmerT_51231-T1
Valid prediction for GeneMark_model.88914_t
Valid prediction for snap_scaffold_22-snap.1936-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for snap_scaffold_22-snap.1925-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_22-snap.1929-T1
Valid prediction for snap_scaffold_22-snap.1933-T1
Valid prediction for snap_scaffold_22-snap.1943-T1
Valid prediction for GlimmerHMM_glimmerT_51236-T1
Valid prediction for GlimmerHMM_glimmerT_51229-T1
Valid prediction for CodingQuarry_transcript_34196-T1
Couldn't classify 80470, 82131
Sorry, prediction pasa_asmbl_29589.p1 fails validation.
(CCT)	 CC	80470-82131	GT	AGG
Valid prediction for snap_scaffold_22-snap.1915-T1
Valid prediction for GeneMark_model.88921_t
Valid prediction for snap_scaffold_22-snap.1950-T1
Valid prediction for GeneMark_model.88939_t
Valid prediction for GlimmerHMM_glimmerT_51228-T1
Valid prediction for GeneMark_model.88918_t
Valid prediction for Augustus_model.g34355.t1
Valid prediction for snap_scaffold_22-snap.1904-T1
Valid prediction for GeneMark_model.88936_t
Valid prediction for GeneMark_model.88938_t
Couldn't classify 73587, 73733
Couldn't classify 75489, 75548
Sorry, prediction pasa_asmbl_29587.p1 fails validation.
(AGC)	 CG	73587-73733	GT	AGG
(AGT)	 AG	73971-74035	GT	AGG
(GTT)	 AG	74198-74303	GT	AGG
(TCC)	 AG	74539-74688	GT	AGG
(TGC)	 AG	75316-75387	GT	GGG
(GAT)	 AG	75489-75548	GT	AGG
-recovered pasa_asmbl_29587.p1, internal, 73971, 74035
-recovered pasa_asmbl_29587.p1, internal, 74198, 74303
-recovered pasa_asmbl_29587.p1, internal, 74539, 74688
-recovered pasa_asmbl_29587.p1, internal, 75316, 75387
-recovered pasa_asmbl_29587.p1, internal, 75489, 75548
Valid prediction for snap_scaffold_22-snap.1926-T1
Valid prediction for GeneMark_model.88972_t
Couldn't classify 28536, 28604
Sorry, prediction GeneMark_model.88908_t fails validation.
(AGA)	 AG	28536-28604	GT	GAG
(AGT)	 AG	28625-28633	GT	ACG
(GCA)	 AG	28654-28812	GC	GAG
(TAC)	 AG	28841-28924	GT	GGG
(TGA)	 AG	29204-29334	GT	TGG
(ACA)	 AG	29622-29803	GT	AGG
(GAG)	 AG	29898-29950	GT	GAG
(GAG)	 AG	29973-30045	GT	TAG
(GAG)	 AG	30065-30258	GT	GAG
(GAC)	 AG	30280-30304	CA	AAC
-recovered GeneMark_model.88908_t, terminal, 30280, 30304
-recovered GeneMark_model.88908_t, internal, 28536, 28604
-recovered GeneMark_model.88908_t, internal, 28625, 28633
-recovered GeneMark_model.88908_t, internal, 28654, 28812
-recovered GeneMark_model.88908_t, internal, 28841, 28924
-recovered GeneMark_model.88908_t, internal, 29204, 29334
-recovered GeneMark_model.88908_t, internal, 29622, 29803
-recovered GeneMark_model.88908_t, internal, 29898, 29950
-recovered GeneMark_model.88908_t, internal, 29973, 30045
-recovered GeneMark_model.88908_t, internal, 30065, 30258
Valid prediction for Augustus_model.g34352.t1
Valid prediction for snap_scaffold_22-snap.1944-T1
Couldn't classify 162784, 162796
Sorry, prediction pasa_asmbl_29594.p1 fails validation.
(GAA)	 CT	162784-162796	GT	AGG
(GTT)	 AG	162976-163038	GT	AGG
(CTG)	 AG	163687-163858	GT	TAG
(CTG)	 AG	164512-164673	GT	AGG
(AAA)	 AG	165411-165499	GT	AGG
(CCA)	 AG	166080-166276	GT	TGG
(ACT)	 AG	166492-166536	CT	AAC
-recovered pasa_asmbl_29594.p1, terminal, 166492, 166536
-recovered pasa_asmbl_29594.p1, internal, 162976, 163038
-recovered pasa_asmbl_29594.p1, internal, 163687, 163858
-recovered pasa_asmbl_29594.p1, internal, 164512, 164673
-recovered pasa_asmbl_29594.p1, internal, 165411, 165499
-recovered pasa_asmbl_29594.p1, internal, 166080, 166276
Valid prediction for GeneMark_model.88910_t
Valid prediction for GlimmerHMM_glimmerT_51225-T1
Valid prediction for snap_scaffold_22-snap.1905-T1
Valid prediction for GeneMark_model.88968_t
Couldn't classify 128794, 129108
Sorry, prediction pasa_asmbl_30298.p1 fails validation.
(ACA)	 AC	128794-129108	TC	TCT
Valid prediction for GlimmerHMM_glimmerT_51234-T1
Couldn't classify 92020, 92108
Sorry, prediction pasa_asmbl_29591.p1 fails validation.
(CGT)	 CC	92020-92108	GT	AGG
(TTT)	 AG	92440-92561	GT	TGG
(GTC)	 AG	92958-93058	GT	AGG
(TTT)	 AG	93556-93726	GT	CGG
(GTT)	 AG	94371-94550	AG	AGA
-recovered pasa_asmbl_29591.p1, terminal, 94371, 94550
-recovered pasa_asmbl_29591.p1, internal, 92440, 92561
-recovered pasa_asmbl_29591.p1, internal, 92958, 93058
-recovered pasa_asmbl_29591.p1, internal, 93556, 93726
Valid prediction for GlimmerHMM_glimmerT_51230-T1
Valid prediction for snap_scaffold_22-snap.1934-T1
Valid prediction for GlimmerHMM_glimmerT_51211-T1
Valid prediction for GlimmerHMM_glimmerT_51213-T1
Valid prediction for snap_scaffold_22-snap.1947-T1
Valid prediction for GeneMark_model.88965_t
Valid prediction for snap_scaffold_22-snap.1940-T1
Valid prediction for GlimmerHMM_glimmerT_51219-T1
Valid prediction for snap_scaffold_22-snap.1903-T1
Valid prediction for GeneMark_model.88950_t
Valid prediction for GeneMark_model.88948_t
Valid prediction for GeneMark_model.88958_t
Valid prediction for snap_scaffold_22-snap.1923-T1
Valid prediction for Augustus_model.g34356.t1
Valid prediction for GeneMark_model.88905_t
Valid prediction for GlimmerHMM_glimmerT_51227-T1
Valid prediction for snap_scaffold_22-snap.1932-T1
Valid prediction for snap_scaffold_22-snap.1910-T1
Valid prediction for pasa_asmbl_29593.p1
Valid prediction for Augustus_model.g34344.t1
Valid prediction for GeneMark_model.88923_t
Couldn't classify 21150, 21181
Sorry, prediction GeneMark_model.88907_t fails validation.
(ATG)	 CC	16456-16595	GT	AAG
(AGA)	 AG	19519-19525	GT	GAG
(CGA)	 AG	19606-19672	GT	CTG
(TCA)	 AG	19704-19749	GT	AGG
(AGA)	 AG	19995-20033	GC	GAG
(GGA)	 AG	20056-20169	GT	CAG
(AGA)	 AG	20299-20439	GT	AGG
(AGA)	 AG	20463-20525	GT	GCG
(AGT)	 AG	20639-20749	GT	GGG
(AGG)	 AG	20780-20884	GT	CGG
(GGG)	 AG	21108-21119	GT	AGG
(GAG)	 AG	21150-21181	GT	GGG
-recovered GeneMark_model.88907_t, initial, 16456, 16595
-recovered GeneMark_model.88907_t, internal, 19519, 19525
-recovered GeneMark_model.88907_t, internal, 19606, 19672
-recovered GeneMark_model.88907_t, internal, 19704, 19749
-recovered GeneMark_model.88907_t, internal, 19995, 20033
-recovered GeneMark_model.88907_t, internal, 20056, 20169
-recovered GeneMark_model.88907_t, internal, 20299, 20439
-recovered GeneMark_model.88907_t, internal, 20463, 20525
-recovered GeneMark_model.88907_t, internal, 20639, 20749
-recovered GeneMark_model.88907_t, internal, 20780, 20884
-recovered GeneMark_model.88907_t, internal, 21108, 21119
-recovered GeneMark_model.88907_t, internal, 21150, 21181
Valid prediction for GeneMark_model.88928_t
Valid prediction for GeneMark_model.88930_t
Valid prediction for GeneMark_model.88934_t
Valid prediction for snap_scaffold_22-snap.1906-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.88942_t
Valid prediction for GeneMark_model.88932_t
Valid prediction for GeneMark_model.88944_t
Couldn't classify 88587, 88669
Couldn't classify 89923, 89936
Sorry, prediction pasa_asmbl_29590.p1 fails validation.
(GCG)	 CA	88587-88669	GT	AGG
(GTG)	 AG	88753-88875	GT	GCG
(GCT)	 AG	89614-89720	GT	AGG
(AGT)	 AG	89923-89936	CA	AGC
-recovered pasa_asmbl_29590.p1, internal, 88753, 88875
-recovered pasa_asmbl_29590.p1, internal, 89614, 89720
Couldn't classify 252380, 252733
Sorry, prediction pasa_asmbl_29816.p1 fails validation.
(ATG)	 AC	252380-252733	AA	GGA
Valid prediction for snap_scaffold_22-snap.1938-T1
Valid prediction for GlimmerHMM_glimmerT_51217-T1
Valid prediction for GeneMark_model.88946_t
Valid prediction for Augustus_model.g34353.t1
Valid prediction for snap_scaffold_22-snap.1921-T1
Valid prediction for GlimmerHMM_glimmerT_51221-T1
Valid prediction for GeneMark_model.88973_t
Valid prediction for GlimmerHMM_glimmerT_51216-T1
Valid prediction for HiQ_model.g34347.t1
Valid prediction for snap_scaffold_22-snap.1908-T1
Valid prediction for GeneMark_model.88964_t
Valid prediction for GeneMark_model.88955_t
Valid prediction for snap_scaffold_22-snap.1909-T1
Valid prediction for CodingQuarry_transcript_34197-T1
Valid prediction for GeneMark_model.88912_t
Valid prediction for Augustus_model.g34345.t1
Valid prediction for GeneMark_model.88953_t
Valid prediction for GeneMark_model.88906_t
Valid prediction for Augustus_model.g34357.t1
Valid prediction for GeneMark_model.88967_t
Valid prediction for GeneMark_model.88952_t
Valid prediction for GlimmerHMM_glimmerT_51226-T1
Valid prediction for GeneMark_model.88960_t
Couldn't classify 75999, 76087
Couldn't classify 77925, 78086
Sorry, prediction pasa_asmbl_29588.p1 fails validation.
(AAC)	 AG	75999-76087	GT	GCG
(GGT)	 AG	76473-76586	GT	AGG
(TGC)	 AG	76898-77048	GT	AGG
(TTG)	 AG	77352-77517	GT	GGG
(CTC)	 AG	77640-77695	GT	AGG
(CGC)	 AG	77925-78086	CC	CCC
-recovered pasa_asmbl_29588.p1, internal, 75999, 76087
-recovered pasa_asmbl_29588.p1, internal, 76473, 76586
-recovered pasa_asmbl_29588.p1, internal, 76898, 77048
-recovered pasa_asmbl_29588.p1, internal, 77352, 77517
-recovered pasa_asmbl_29588.p1, internal, 77640, 77695
Valid prediction for Augustus_model.g34341.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.88931_t
Valid prediction for GlimmerHMM_glimmerT_51222-T1
Valid prediction for GlimmerHMM_glimmerT_51212-T1
Valid prediction for GeneMark_model.88911_t
Valid prediction for Augustus_model.g34354.t1
Valid prediction for snap_scaffold_22-snap.1927-T1
Valid prediction for pasa_asmbl_30296.p1
Valid prediction for GeneMark_model.88947_t
Valid prediction for snap_scaffold_22-snap.1911-T1
Couldn't classify 221907, 222002
Couldn't classify 224534, 224719
Sorry, prediction pasa_asmbl_30289.p1 fails validation.
(GAC)	 CA	221907-222002	GT	CTG
(GAC)	 AG	222210-222320	GT	AGG
(GAC)	 AG	222469-222570	GT	AGG
(CCT)	 AG	222889-222972	GT	AGG
(GGC)	 AG	223690-223839	GT	CGG
(GTT)	 AG	224534-224719	GT	AGG
-recovered pasa_asmbl_30289.p1, internal, 222210, 222320
-recovered pasa_asmbl_30289.p1, internal, 222469, 222570
-recovered pasa_asmbl_30289.p1, internal, 222889, 222972
-recovered pasa_asmbl_30289.p1, internal, 223690, 223839
-recovered pasa_asmbl_30289.p1, internal, 224534, 224719
Valid prediction for GeneMark_model.88943_t
Valid prediction for GlimmerHMM_glimmerT_51235-T1
Valid prediction for GeneMark_model.88929_t
Couldn't classify 244377, 244448
Sorry, prediction pasa_asmbl_30283.p1 fails validation.
(ATG)	 AC	238109-238233	GT	AGG
(TCC)	 AG	239242-239347	GT	AGG
(GTG)	 AG	240229-240252	GT	TGG
(CAG)	 AG	242514-242589	GT	GGG
(TGA)	 AG	242853-242947	GT	GAG
(GAG)	 AG	243157-243264	GT	AGG
(GAT)	 AG	243719-243820	GT	TGG
(CCC)	 AG	243984-244067	GT	AGG
(GGT)	 AG	244377-244448	CT	CCC
-recovered pasa_asmbl_30283.p1, initial, 238109, 238233
-recovered pasa_asmbl_30283.p1, internal, 239242, 239347
-recovered pasa_asmbl_30283.p1, internal, 240229, 240252
-recovered pasa_asmbl_30283.p1, internal, 242514, 242589
-recovered pasa_asmbl_30283.p1, internal, 242853, 242947
-recovered pasa_asmbl_30283.p1, internal, 243157, 243264
-recovered pasa_asmbl_30283.p1, internal, 243719, 243820
-recovered pasa_asmbl_30283.p1, internal, 243984, 244067
Valid prediction for snap_scaffold_22-snap.1912-T1
Valid prediction for GlimmerHMM_glimmerT_51224-T1
Valid prediction for snap_scaffold_22-snap.1917-T1
Valid prediction for Augustus_model.g34350.t1
Valid prediction for snap_scaffold_22-snap.1941-T1
Valid prediction for GeneMark_model.88954_t
Valid prediction for Augustus_model.g34338.t1
Valid prediction for pasa_asmbl_30294.p1
Valid prediction for Augustus_model.g34340.t1
Valid prediction for GeneMark_model.88949_t
Couldn't classify 118929, 119189
Sorry, prediction pasa_asmbl_30299.p1 fails validation.
(ATG)	 CC	115758-116414	GT	AGG
(GTG)	 AG	117553-117757	GT	AGG
(AGA)	 AG	118419-118612	GT	AGG
(GAT)	 AG	118929-119189	AC	ACA
-recovered pasa_asmbl_30299.p1, initial, 115758, 116414
-recovered pasa_asmbl_30299.p1, internal, 117553, 117757
-recovered pasa_asmbl_30299.p1, internal, 118419, 118612
Valid prediction for HiQ_model.g34346.t1
Valid prediction for GlimmerHMM_glimmerT_51223-T1
Valid prediction for GeneMark_model.88933_t
Valid prediction for GeneMark_model.88920_t
Valid prediction for GlimmerHMM_glimmerT_51210-T1
Valid prediction for snap_scaffold_22-snap.1922-T1
Valid prediction for snap_scaffold_22-snap.1920-T1
Couldn't classify 245173, 245379
Couldn't classify 247038, 247133
Sorry, prediction pasa_asmbl_30281.p1 fails validation.
(CTC)	 AG	245173-245379	GT	CGG
(CGT)	 AG	246067-246159	GT	AGG
(TTT)	 AG	246575-246688	GC	AGG
(GAG)	 AG	247038-247133	CT	TCC
-recovered pasa_asmbl_30281.p1, internal, 245173, 245379
-recovered pasa_asmbl_30281.p1, internal, 246067, 246159
-recovered pasa_asmbl_30281.p1, internal, 246575, 246688
Valid prediction for snap_scaffold_22-snap.1914-T1
Valid prediction for GlimmerHMM_glimmerT_51209-T1
Valid prediction for snap_scaffold_22-snap.1945-T1
Valid prediction for GeneMark_model.88956_t
Valid prediction for GeneMark_model.88915_t
Valid prediction for HiQ_model.g34343.t1
Valid prediction for Augustus_model.g34349.t1
Valid prediction for snap_scaffold_22-snap.1907-T1
Valid prediction for GlimmerHMM_glimmerT_51218-T1
Valid prediction for snap_scaffold_22-snap.1931-T1
Valid prediction for GeneMark_model.88916_t
Valid prediction for snap_scaffold_22-snap.1924-T1
Valid prediction for snap_scaffold_22-snap.1949-T1
Valid prediction for snap_scaffold_22-snap.1939-T1
Valid prediction for GeneMark_model.88957_t
Valid prediction for pasa_asmbl_30293.p1
Valid prediction for GeneMark_model.88963_t
Valid prediction for GlimmerHMM_glimmerT_51214-T1
Valid prediction for GeneMark_model.88971_t
Valid prediction for GeneMark_model.88927_t
Valid prediction for snap_scaffold_22-snap.1928-T1
Valid prediction for Augustus_model.g34337.t1
Valid prediction for snap_scaffold_22-snap.1919-T1
Valid prediction for snap_scaffold_22-snap.1937-T1
Valid prediction for CodingQuarry_transcript_34195-T1
Valid prediction for GeneMark_model.88945_t
Couldn't classify 58352, 58523
Sorry, prediction pasa_asmbl_30301.p1 fails validation.
(TCC)	 CT	58352-58523	GT	GGG
(AGA)	 AG	59273-59361	GT	AGG
(GCA)	 AG	59619-60077	GC	AGG
-recovered pasa_asmbl_30301.p1, terminal, 59619, 60077
-recovered pasa_asmbl_30301.p1, internal, 59273, 59361
-recovered pasa_asmbl_30301.p1, internal, 59619, 60077
Valid prediction for snap_scaffold_22-snap.1918-T1
Valid prediction for snap_scaffold_22-snap.1942-T1
Valid prediction for snap_scaffold_22-snap.1916-T1
Valid prediction for pasa_asmbl_30297.p1
Valid prediction for GeneMark_model.88922_t
Valid prediction for Augustus_model.g34348.t1
Valid prediction for snap_scaffold_22-snap.1930-T1
Valid prediction for GeneMark_model.88970_t
Valid prediction for Augustus_model.g34351.t1
Valid prediction for GeneMark_model.88917_t
Valid prediction for GeneMark_model.88951_t
Valid prediction for GlimmerHMM_glimmerT_51208-T1
Valid prediction for snap_scaffold_22-snap.1902-T1
Valid prediction for GeneMark_model.88909_t
Valid prediction for CodingQuarry_transcript_34198-T1
Valid prediction for GeneMark_model.88940_t
Valid prediction for snap_scaffold_22-snap.1946-T1
Valid prediction for GeneMark_model.88924_t
Valid prediction for GeneMark_model.88919_t
Valid prediction for Augustus_model.g34339.t1
Valid prediction for GlimmerHMM_glimmerT_51220-T1
Valid prediction for snap_scaffold_22-snap.1913-T1
Valid prediction for GeneMark_model.88937_t
Valid prediction for GeneMark_model.88961_t
Valid prediction for snap_scaffold_22-snap.1948-T1
Valid prediction for GeneMark_model.88935_t
Valid prediction for GeneMark_model.88966_t
Valid prediction for GlimmerHMM_glimmerT_51232-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15820, rend_intergenic: 7821  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30753, rend_intergenic: 19240  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36860, rend_intergenic: 31119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69708, rend_intergenic: 40824  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94550, rend_intergenic: 73965  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102415, rend_intergenic: 98985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115794, rend_intergenic: 114955  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123549, rend_intergenic: 115841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132240, rend_intergenic: 129171  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134563, rend_intergenic: 133614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143564, rend_intergenic: 134653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153634, rend_intergenic: 148225  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 239977, rend_intergenic: 235096  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244776, rend_intergenic: 243395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 248702, rend_intergenic: 244954  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 252697, rend_intergenic: 250750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 254438
-exon list size: 977


building trellis

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8.9    
9.0    
9.1    
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9.3    
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9.7    
9.8    
9.9    
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10.8    
10.9    
11.0    
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11.6    
11.7    
11.8    
12.0    
12.1    
12.2    
12.3    
12.4    
12.5    
12.6    
12.7    
12.8    
12.9    
13.0    
13.1    
13.2    
13.3    
13.4    
13.5    
13.6    
13.7    
13.8    
13.9    
14.0    
14.1    
14.2    
14.3    
14.4    
14.5    
14.6    
14.7    
14.8    
14.9    
15.0    
15.1    
15.2    
15.3    
15.4    
15.5    
15.6    
15.7    
15.8    
15.9    
16.0    
16.1    
16.2    
16.3    
16.4    
16.5    
16.6    
16.8    
16.9    
17.0    
17.1    
17.2    
17.3    
17.4    
17.5    
17.6    
17.7    
17.8    
17.9    
18.0    
18.1    
18.2    
18.3    
18.4    
18.5    
18.6    
18.7    
18.8    
18.9    
19.0    
19.1    
19.2    
19.3    
19.4    
19.5    
19.6    
19.7    
19.8    
19.9    
20.0    
20.1    
20.2    
20.3    
20.4    
20.5    
20.6    
20.7    
20.8    
20.9    
21.0    
21.1    
21.2    
21.3    
21.5    
21.6    
21.7    
21.8    
21.9    
22.0    
22.1    
22.2    
22.3    
22.4    
22.5    
22.6    
22.7    
22.8    
22.9    
23.0    
23.1    
23.2    
23.3    
23.4    
23.5    
23.6    
23.7    
23.8    
23.9    
24.0    
24.1    
24.2    
24.3    
24.4    
24.5    
24.6    
24.7    
24.8    
24.9    
25.0    
25.1    
25.2    
25.3    
25.4    
25.5    
25.6    
25.7    
25.8    
25.9    
26.0    
26.1    
26.3    
26.4    
26.5    
26.6    
26.7    
26.8    
26.9    
27.0    
27.1    
27.2    
27.3    
27.4    
27.5    
27.6    
27.7    
27.8    
27.9    
28.0    
28.1    
28.2    
28.3    
28.4    
28.5    
28.6    
28.7    
28.8    
28.9    
29.0    
29.1    
29.2    
29.3    
29.4    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
30.2    
30.3    
30.4    
30.5    
30.6    
30.7    
30.8    
30.9    
31.1    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
31.9    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.0    
33.1    
33.2    
33.3    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 43 predictions from path traversal
Error with prediction: snap lend_intergenic: 15820, rend_intergenic: 7821  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30753, rend_intergenic: 19240  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36860, rend_intergenic: 31119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69708, rend_intergenic: 40824  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94550, rend_intergenic: 73965  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102415, rend_intergenic: 98985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115794, rend_intergenic: 114955  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123549, rend_intergenic: 115841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132240, rend_intergenic: 129171  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134563, rend_intergenic: 133614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143564, rend_intergenic: 134653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153634, rend_intergenic: 148225  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 239977, rend_intergenic: 235096  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244776, rend_intergenic: 243395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 248702, rend_intergenic: 244954  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 252697, rend_intergenic: 250750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support