-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_22/scaffold_22_6320601-6537982

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_22-snap.1259-T1
Valid prediction for GeneMark_model.87981_t
Valid prediction for GeneMark_model.87990_t
Valid prediction for GeneMark_model.87930_t
Valid prediction for GeneMark_model.87932_t
Valid prediction for Augustus_model.g34079.t1
Valid prediction for Augustus_model.g34078.t1
Valid prediction for Augustus_model.g34058.t1
Valid prediction for GeneMark_model.87971_t
Valid prediction for GlimmerHMM_glimmerT_50829-T1
Valid prediction for GlimmerHMM_glimmerT_50807-T1
Valid prediction for snap_scaffold_22-snap.1248-T1
Valid prediction for snap_scaffold_22-snap.1283-T1
Couldn't classify 194448, 194564
Sorry, prediction pasa_asmbl_29407.p1 fails validation.
(GTC)	 AG	194448-194564	GT	AGG
(CTA)	 AG	194896-194940	GT	AGG
(GAC)	 AG	195493-195637	GT	AGG
(GGT)	 AG	196023-196090	AG	GAA
add_exon() Sorry, pasa_asmbl_29407.p1 195493-195637-terminal-3 is invalid.
-recovered pasa_asmbl_29407.p1, terminal, 195493, 195637
-recovered pasa_asmbl_29407.p1, terminal, 196023, 196090
-recovered pasa_asmbl_29407.p1, internal, 194448, 194564
-recovered pasa_asmbl_29407.p1, internal, 194896, 194940
-recovered pasa_asmbl_29407.p1, internal, 195493, 195637
Valid prediction for snap_scaffold_22-snap.1278-T1
Valid prediction for Augustus_model.g34061.t1
Valid prediction for GeneMark_model.88011_t
Valid prediction for GeneMark_model.87950_t
Valid prediction for Augustus_model.g34080.t1
Valid prediction for GeneMark_model.87946_t
Valid prediction for GeneMark_model.87979_t
Valid prediction for GlimmerHMM_glimmerT_50839-T1
Valid prediction for snap_scaffold_22-snap.1264-T1
Couldn't classify 192136, 192152
Couldn't classify 193027, 193101
Sorry, prediction pasa_asmbl_29405.p1 fails validation.
(TTC)	 TA	192136-192152	GT	AGG
(GTG)	 AG	192367-192467	GT	AGG
(GCG)	 AG	192565-192638	GT	AGG
(CTC)	 AG	192755-192892	GT	AGG
(TGC)	 AG	193027-193101	TC	GCT
-recovered pasa_asmbl_29405.p1, internal, 192367, 192467
-recovered pasa_asmbl_29405.p1, internal, 192565, 192638
-recovered pasa_asmbl_29405.p1, internal, 192755, 192892
Valid prediction for snap_scaffold_22-snap.1241-T1
Valid prediction for snap_scaffold_22-snap.1246-T1
Valid prediction for snap_scaffold_22-snap.1273-T1
Valid prediction for snap_scaffold_22-snap.1285-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_22-snap.1268-T1
Valid prediction for GeneMark_model.87983_t
Valid prediction for GlimmerHMM_glimmerT_50813-T1
Valid prediction for snap_scaffold_22-snap.1279-T1
Valid prediction for Augustus_model.g34060.t1
Valid prediction for GeneMark_model.87986_t
Valid prediction for GlimmerHMM_glimmerT_50834-T1
Valid prediction for GeneMark_model.87952_t
Valid prediction for snap_scaffold_22-snap.1255-T1
Valid prediction for Augustus_model.g34073.t1
Valid prediction for Augustus_model.g34081.t1
Valid prediction for GeneMark_model.88005_t
Valid prediction for GlimmerHMM_glimmerT_50805-T1
Valid prediction for GlimmerHMM_glimmerT_50822-T1
Valid prediction for GlimmerHMM_glimmerT_50819-T1
Valid prediction for Augustus_model.g34067.t1
Valid prediction for Augustus_model.g34057.t1
Valid prediction for snap_scaffold_22-snap.1242-T1
Valid prediction for CodingQuarry_transcript_34129-T1
Valid prediction for GlimmerHMM_glimmerT_50838-T1
Valid prediction for GeneMark_model.87973_t
Valid prediction for GeneMark_model.87992_t
Valid prediction for snap_scaffold_22-snap.1290-T1
Valid prediction for GeneMark_model.87977_t
Valid prediction for snap_scaffold_22-snap.1281-T1
Valid prediction for GeneMark_model.87933_t
Valid prediction for GeneMark_model.87941_t
Valid prediction for GeneMark_model.87935_t
Valid prediction for GeneMark_model.88001_t
Valid prediction for GlimmerHMM_glimmerT_50815-T1
Valid prediction for GeneMark_model.87993_t
Couldn't classify 189548, 189659
Couldn't classify 190654, 190694
Sorry, prediction pasa_asmbl_29404.p2 fails validation.
(CGC)	 CT	189548-189659	GT	TGG
(ACG)	 AG	189813-190039	GT	AGG
(AAG)	 AG	190176-190329	GT	GGG
(AGA)	 AG	190654-190694	AA	GGA
-recovered pasa_asmbl_29404.p2, internal, 189813, 190039
-recovered pasa_asmbl_29404.p2, internal, 190176, 190329
Valid prediction for snap_scaffold_22-snap.1265-T1
Valid prediction for snap_scaffold_22-snap.1292-T1
Valid prediction for Augustus_model.g34075.t1
Couldn't classify 188181, 188270
Couldn't classify 189445, 189466
Sorry, prediction pasa_asmbl_29721.p2 fails validation.
(GAG)	 CA	188181-188270	GT	AGG
(AGG)	 AG	188599-188713	GT	AGG
(GAC)	 AG	189193-189301	GT	AGG
(GGG)	 AG	189445-189466	GC	AGG
-recovered pasa_asmbl_29721.p2, internal, 188599, 188713
-recovered pasa_asmbl_29721.p2, internal, 189193, 189301
-recovered pasa_asmbl_29721.p2, internal, 189445, 189466
Valid prediction for Augustus_model.g34083.t1
Valid prediction for Augustus_model.g34066.t1
Valid prediction for GeneMark_model.87964_t
Valid prediction for GeneMark_model.87942_t
Valid prediction for GeneMark_model.87995_t
Valid prediction for GlimmerHMM_glimmerT_50823-T1
Valid prediction for Augustus_model.g34062.t1
Valid prediction for GlimmerHMM_glimmerT_50828-T1
Valid prediction for GeneMark_model.87962_t
Valid prediction for GeneMark_model.87954_t
Valid prediction for GlimmerHMM_glimmerT_50824-T1
Valid prediction for snap_scaffold_22-snap.1244-T1
Valid prediction for Augustus_model.g34082.t1
Valid prediction for GeneMark_model.87960_t
Valid prediction for pasa_asmbl_29409.p1
Valid prediction for snap_scaffold_22-snap.1276-T1
Valid prediction for Augustus_model.g34063.t1
Valid prediction for snap_scaffold_22-snap.1288-T1
Valid prediction for snap_scaffold_22-snap.1280-T1
Valid prediction for GlimmerHMM_glimmerT_50816-T1
Valid prediction for snap_scaffold_22-snap.1272-T1
Valid prediction for GeneMark_model.88007_t
Valid prediction for CodingQuarry_transcript_34131-T1
Valid prediction for snap_scaffold_22-snap.1274-T1
Valid prediction for Augustus_model.g34059.t1
Valid prediction for GeneMark_model.87956_t
Valid prediction for snap_scaffold_22-snap.1267-T1
Valid prediction for GeneMark_model.88003_t
Valid prediction for GeneMark_model.87969_t
Valid prediction for Augustus_model.g34071.t1
Valid prediction for GlimmerHMM_glimmerT_50830-T1
Valid prediction for Augustus_model.g34056.t1
Valid prediction for Augustus_model.g34077.t1
Valid prediction for GeneMark_model.87988_t
Valid prediction for CodingQuarry_transcript_34130-T1
Valid prediction for GeneMark_model.87958_t
Valid prediction for GeneMark_model.87937_t
Valid prediction for GlimmerHMM_glimmerT_50821-T1
Valid prediction for GlimmerHMM_glimmerT_50826-T1
Valid prediction for GlimmerHMM_glimmerT_50832-T1
Valid prediction for GlimmerHMM_glimmerT_50809-T1
Valid prediction for GeneMark_model.87943_t
Valid prediction for GlimmerHMM_glimmerT_50840-T1
Valid prediction for GeneMark_model.87997_t
Valid prediction for snap_scaffold_22-snap.1251-T1
Valid prediction for GeneMark_model.87984_t
Valid prediction for GeneMark_model.88008_t
Valid prediction for snap_scaffold_22-snap.1261-T1
Valid prediction for Augustus_model.g34070.t1
Valid prediction for GlimmerHMM_glimmerT_50835-T1
Valid prediction for Augustus_model.g34069.t1
Valid prediction for GeneMark_model.87948_t
Valid prediction for snap_scaffold_22-snap.1277-T1
Valid prediction for GeneMark_model.88010_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.87999_t
Valid prediction for snap_scaffold_22-snap.1240-T1
Valid prediction for GeneMark_model.87929_t
Valid prediction for snap_scaffold_22-snap.1245-T1
Valid prediction for snap_scaffold_22-snap.1266-T1
Valid prediction for GlimmerHMM_glimmerT_50831-T1
Valid prediction for GeneMark_model.88006_t
Valid prediction for snap_scaffold_22-snap.1262-T1
Valid prediction for snap_scaffold_22-snap.1258-T1
Valid prediction for GeneMark_model.87978_t
Valid prediction for GeneMark_model.87963_t
Valid prediction for GlimmerHMM_glimmerT_50804-T1
Valid prediction for GeneMark_model.87953_t
Valid prediction for GeneMark_model.87938_t
Valid prediction for snap_scaffold_22-snap.1275-T1
Valid prediction for GeneMark_model.87947_t
Valid prediction for snap_scaffold_22-snap.1293-T1
Valid prediction for snap_scaffold_22-snap.1256-T1
Valid prediction for GeneMark_model.88000_t
Valid prediction for snap_scaffold_22-snap.1287-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.88004_t
Valid prediction for snap_scaffold_22-snap.1289-T1
Valid prediction for GeneMark_model.87985_t
Valid prediction for GlimmerHMM_glimmerT_50833-T1
Valid prediction for GeneMark_model.87934_t
Valid prediction for GeneMark_model.87974_t
Valid prediction for GlimmerHMM_glimmerT_50808-T1
Valid prediction for GeneMark_model.87996_t
Valid prediction for GlimmerHMM_glimmerT_50814-T1
Valid prediction for snap_scaffold_22-snap.1286-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GeneMark_model.87957_t
Valid prediction for snap_scaffold_22-snap.1257-T1
Valid prediction for GeneMark_model.87972_t
Valid prediction for Augustus_model.g34064.t1
Valid prediction for GeneMark_model.87936_t
Valid prediction for GeneMark_model.87991_t
Valid prediction for Augustus_model.g34054.t1
Valid prediction for GeneMark_model.87945_t
Valid prediction for snap_scaffold_22-snap.1247-T1
Valid prediction for GeneMark_model.87944_t
Valid prediction for GlimmerHMM_glimmerT_50825-T1
Valid prediction for GlimmerHMM_glimmerT_50820-T1
Valid prediction for GeneMark_model.87965_t
Valid prediction for snap_scaffold_22-snap.1291-T1
Valid prediction for snap_scaffold_22-snap.1254-T1
Valid prediction for GlimmerHMM_glimmerT_50811-T1
Valid prediction for snap_scaffold_22-snap.1263-T1
Valid prediction for GeneMark_model.87940_t
Valid prediction for Augustus_model.g34065.t1
Valid prediction for snap_scaffold_22-snap.1282-T1
Valid prediction for GeneMark_model.87994_t
Valid prediction for snap_scaffold_22-snap.1260-T1
Valid prediction for GeneMark_model.87975_t
Valid prediction for Augustus_model.g34076.t1
Valid prediction for GeneMark_model.87931_t
Valid prediction for Augustus_model.g34072.t1
Valid prediction for GlimmerHMM_glimmerT_50827-T1
Valid prediction for GeneMark_model.87970_t
Valid prediction for GlimmerHMM_glimmerT_50817-T1
Valid prediction for GeneMark_model.87961_t
Valid prediction for GeneMark_model.87967_t
Valid prediction for Augustus_model.g34068.t1
Valid prediction for GeneMark_model.87951_t
Valid prediction for GeneMark_model.87949_t
Valid prediction for GeneMark_model.87928_t
Valid prediction for GeneMark_model.88002_t
Valid prediction for GeneMark_model.87959_t
Valid prediction for GeneMark_model.87987_t
Valid prediction for GlimmerHMM_glimmerT_50837-T1
Valid prediction for GeneMark_model.87939_t
Valid prediction for snap_scaffold_22-snap.1243-T1
Valid prediction for GeneMark_model.87968_t
Valid prediction for GeneMark_model.88009_t
Valid prediction for snap_scaffold_22-snap.1270-T1
Valid prediction for HiQ_model.g34055.t1
Valid prediction for snap_scaffold_22-snap.1284-T1
Valid prediction for GlimmerHMM_glimmerT_50818-T1
Valid prediction for GlimmerHMM_glimmerT_50810-T1
Valid prediction for GeneMark_model.88012_t
Couldn't classify 211115, 211223
Sorry, prediction pasa_asmbl_30098.p1 fails validation.
(TCT)	 CC	211115-211223	GT	CGG
(GTT)	 AG	211456-211493	GT	AAG
(TTG)	 AG	211648-211728	GT	TGG
(GCT)	 AG	212143-212286	CC	GAC
-recovered pasa_asmbl_30098.p1, terminal, 212143, 212286
-recovered pasa_asmbl_30098.p1, internal, 211456, 211493
-recovered pasa_asmbl_30098.p1, internal, 211648, 211728
Valid prediction for GeneMark_model.87966_t
Valid prediction for GeneMark_model.87982_t
Valid prediction for Augustus_model.g34074.t1
Valid prediction for snap_scaffold_22-snap.1252-T1
Valid prediction for GlimmerHMM_glimmerT_50836-T1
Valid prediction for GlimmerHMM_glimmerT_50812-T1
Valid prediction for GeneMark_model.87989_t
Valid prediction for GeneMark_model.87976_t
Valid prediction for snap_scaffold_22-snap.1253-T1
Valid prediction for snap_scaffold_22-snap.1271-T1
Valid prediction for snap_scaffold_22-snap.1249-T1
Valid prediction for snap_scaffold_22-snap.1250-T1
Valid prediction for GeneMark_model.87980_t
Valid prediction for GlimmerHMM_glimmerT_50806-T1
Valid prediction for snap_scaffold_22-snap.1269-T1
Valid prediction for GeneMark_model.87955_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 94137, rend_intergenic: 94134  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16687, rend_intergenic: 11099  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26817, rend_intergenic: 22250  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32625, rend_intergenic: 30360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35782, rend_intergenic: 33707  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44259, rend_intergenic: 36663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45916, rend_intergenic: 44385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55765, rend_intergenic: 46543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57811, rend_intergenic: 56140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65825, rend_intergenic: 58262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75944, rend_intergenic: 67824  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89899, rend_intergenic: 77098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102292, rend_intergenic: 91610  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104164, rend_intergenic: 103044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109313, rend_intergenic: 107710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130381, rend_intergenic: 109523  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135331, rend_intergenic: 134159  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196090, rend_intergenic: 184973  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206839, rend_intergenic: 203302  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208619, rend_intergenic: 206884  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 214701, rend_intergenic: 211499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 217382
-exon list size: 1024


building trellis

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36.3    
36.4    
36.5    
36.5    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 64 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 94137, rend_intergenic: 94134  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16687, rend_intergenic: 11099  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26817, rend_intergenic: 22250  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32625, rend_intergenic: 30360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35782, rend_intergenic: 33707  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44259, rend_intergenic: 36663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45916, rend_intergenic: 44385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55765, rend_intergenic: 46543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57811, rend_intergenic: 56140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65825, rend_intergenic: 58262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75944, rend_intergenic: 67824  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89899, rend_intergenic: 77098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102292, rend_intergenic: 91610  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104164, rend_intergenic: 103044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109313, rend_intergenic: 107710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130381, rend_intergenic: 109523  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135331, rend_intergenic: 134159  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196090, rend_intergenic: 184973  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206839, rend_intergenic: 203302  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208619, rend_intergenic: 206884  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 214701, rend_intergenic: 211499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support