-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2175

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 282, 447
Sorry, prediction snap_scaffold_2175-snap.1-T1 fails validation.
(GGC)	 AG	282-447	GT	TGG
(ATG)	 AG	914-972	GT	ATG
(GGG)	 AG	1101-1113	AG	GAA
-recovered snap_scaffold_2175-snap.1-T1, initial, 914, 972
-recovered snap_scaffold_2175-snap.1-T1, terminal, 1101, 1113
-recovered snap_scaffold_2175-snap.1-T1, internal, 282, 447
-recovered snap_scaffold_2175-snap.1-T1, internal, 914, 972
Couldn't classify 73, 125
Sorry, prediction Augustus_model.g41983.t1 fails validation.
(GAC)	 AG	73-125	GT	AGG
(GGC)	 AG	282-447	GT	TGG
(ATG)	 AG	914-947	GT	AAG
(CCC)	 AG	1031-1113	AG	GAA
-recovered Augustus_model.g41983.t1, initial, 914, 947
-recovered Augustus_model.g41983.t1, terminal, 1031, 1113
-recovered Augustus_model.g41983.t1, internal, 73, 125
-recovered Augustus_model.g41983.t1, internal, 282, 447
-recovered Augustus_model.g41983.t1, internal, 914, 947

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1517
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support