-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_217

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.106968_t
Valid prediction for GlimmerHMM_glimmerT_61526-T1
Couldn't classify 419, 475
Sorry, prediction GeneMark_model.106966_t fails validation.
(GGG)	 AG	419-475	GT	TGG
(GTC)	 AG	1070-1087	GT	ATG
(GTG)	 AG	1173-1220	GT	CTG
(AGG)	 AG	1242-1247	GT	AGG
(ACG)	 AG	1274-1300	GC	GGG
(ATT)	 AG	1471-1545	GT	GAG
(AGA)	 AG	1588-1674	GT	GAG
(AAA)	 AG	1698-1730	GT	GTG
(GGA)	 AG	2144-2170	GC	CAG
(AGA)	 AG	2194-2362	GA	AAG
-recovered GeneMark_model.106966_t, terminal, 2194, 2362
-recovered GeneMark_model.106966_t, internal, 419, 475
-recovered GeneMark_model.106966_t, internal, 1070, 1087
-recovered GeneMark_model.106966_t, internal, 1173, 1220
-recovered GeneMark_model.106966_t, internal, 1242, 1247
-recovered GeneMark_model.106966_t, internal, 1274, 1300
-recovered GeneMark_model.106966_t, internal, 1471, 1545
-recovered GeneMark_model.106966_t, internal, 1588, 1674
-recovered GeneMark_model.106966_t, internal, 1698, 1730
-recovered GeneMark_model.106966_t, internal, 2144, 2170

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.106967_t
Couldn't classify 6071, 6268
Sorry, prediction snap_scaffold_217-snap.1-T1 fails validation.
(ATG)	 CC	2597-2602	GT	AAG
(ATG)	 AG	6071-6268	GT	GGG
-recovered snap_scaffold_217-snap.1-T1, initial, 2597, 2602
-recovered snap_scaffold_217-snap.1-T1, initial, 6071, 6268
-recovered snap_scaffold_217-snap.1-T1, internal, 6071, 6268

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 9457
-exon list size: 51


building trellis

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98.1    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support