-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_21/scaffold_21_9698060-9860636

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.85948_t
Valid prediction for snap_scaffold_21-snap.2144-T1
Valid prediction for GlimmerHMM_glimmerT_49637-T1
Valid prediction for CodingQuarry_transcript_32637-T1
Valid prediction for GlimmerHMM_glimmerT_49646-T1
Valid prediction for HiQ_model.g33298.t1
Valid prediction for snap_scaffold_21-snap.2149-T1
Valid prediction for GeneMark_model.85943_t
Valid prediction for snap_scaffold_21-snap.2115-T1
Valid prediction for GeneMark_model.85944_t
Valid prediction for CodingQuarry_transcript_32636-T1
Valid prediction for GeneMark_model.85969_t
Valid prediction for CodingQuarry_transcript_32638-T1
Valid prediction for GlimmerHMM_glimmerT_49653-T1
Valid prediction for GeneMark_model.85962_t
Valid prediction for snap_scaffold_21-snap.2142-T1
Valid prediction for GeneMark_model.85971_t
Valid prediction for GeneMark_model.85951_t
Valid prediction for GlimmerHMM_glimmerT_49630-T1
Valid prediction for snap_scaffold_21-snap.2117-T1
Valid prediction for GeneMark_model.85973_t
Valid prediction for snap_scaffold_21-snap.2126-T1
Valid prediction for GeneMark_model.85967_t
Valid prediction for snap_scaffold_21-snap.2120-T1
Valid prediction for snap_scaffold_21-snap.2137-T1
Couldn't classify 78683, 78823
Sorry, prediction pasa_asmbl_28980.p1 fails validation.
(ATG)	 AG	66506-66584	GT	AAG
(ATG)	 AG	66728-66823	GT	AGG
(TGA)	 AG	67416-67463	GT	AGG
(GTG)	 AG	67911-68096	GT	CAG
(CAT)	 AG	68442-68581	GT	ATG
(CCT)	 AG	68683-68790	GT	AGG
(GAG)	 AG	68980-69166	GT	CAG
(GTA)	 AG	69319-69488	GT	TGG
(GGT)	 AG	70068-70208	GT	AGG
(AAC)	 AG	70455-70581	GT	TGG
(GTT)	 AG	70851-70943	GT	CGG
(CTG)	 AG	71027-71170	GT	CGG
(CTC)	 AG	71273-71406	GT	AGG
(CGT)	 AG	71793-71980	GT	AGG
(GAA)	 AG	72113-72229	GT	AGG
(TCT)	 AG	72545-72731	GT	AGG
(GTG)	 AG	72872-72962	GT	AGG
(GCA)	 AG	73097-73210	GT	AGG
(GCT)	 AG	73336-73474	GT	AGG
(ACG)	 AG	73616-73793	GT	AGG
(GTG)	 AG	74037-74189	GT	AGG
(ACT)	 AG	75356-75604	GT	AGG
(ATC)	 AG	75861-75984	GT	CAG
(TCA)	 AG	76382-76629	GT	AGG
(GGT)	 AG	77027-77202	GT	AAG
(GTT)	 AG	77501-77730	GT	CGG
(TTG)	 AG	77841-78128	GT	CGG
(GGG)	 AG	78373-78530	GT	CAG
(GTG)	 AG	78683-78823	GT	AGG
-recovered pasa_asmbl_28980.p1, initial, 66506, 66584
-recovered pasa_asmbl_28980.p1, initial, 66728, 66823
-recovered pasa_asmbl_28980.p1, internal, 66506, 66584
-recovered pasa_asmbl_28980.p1, internal, 66728, 66823
-recovered pasa_asmbl_28980.p1, internal, 67416, 67463
-recovered pasa_asmbl_28980.p1, internal, 67911, 68096
-recovered pasa_asmbl_28980.p1, internal, 68442, 68581
-recovered pasa_asmbl_28980.p1, internal, 68683, 68790
-recovered pasa_asmbl_28980.p1, internal, 68980, 69166
-recovered pasa_asmbl_28980.p1, internal, 69319, 69488
-recovered pasa_asmbl_28980.p1, internal, 70068, 70208
-recovered pasa_asmbl_28980.p1, internal, 70455, 70581
-recovered pasa_asmbl_28980.p1, internal, 70851, 70943
-recovered pasa_asmbl_28980.p1, internal, 71027, 71170
-recovered pasa_asmbl_28980.p1, internal, 71273, 71406
-recovered pasa_asmbl_28980.p1, internal, 71793, 71980
-recovered pasa_asmbl_28980.p1, internal, 72113, 72229
-recovered pasa_asmbl_28980.p1, internal, 72545, 72731
-recovered pasa_asmbl_28980.p1, internal, 72872, 72962
-recovered pasa_asmbl_28980.p1, internal, 73097, 73210
-recovered pasa_asmbl_28980.p1, internal, 73336, 73474
-recovered pasa_asmbl_28980.p1, internal, 73616, 73793
-recovered pasa_asmbl_28980.p1, internal, 74037, 74189
-recovered pasa_asmbl_28980.p1, internal, 75356, 75604
-recovered pasa_asmbl_28980.p1, internal, 75861, 75984
-recovered pasa_asmbl_28980.p1, internal, 76382, 76629
-recovered pasa_asmbl_28980.p1, internal, 77027, 77202
-recovered pasa_asmbl_28980.p1, internal, 77501, 77730
-recovered pasa_asmbl_28980.p1, internal, 77841, 78128
-recovered pasa_asmbl_28980.p1, internal, 78373, 78530
-recovered pasa_asmbl_28980.p1, internal, 78683, 78823
Valid prediction for Augustus_model.g33295.t1
Valid prediction for snap_scaffold_21-snap.2130-T1
Couldn't classify 81249, 81275
Sorry, prediction pasa_asmbl_28854.p1 fails validation.
(ATG)	 AC	79538-79575	GT	ACG
(ACT)	 AG	79770-80011	GT	AGG
(ACT)	 AG	80173-80327	GT	AGG
(TTG)	 AG	81249-81275	TG	AGT
-recovered pasa_asmbl_28854.p1, initial, 79538, 79575
-recovered pasa_asmbl_28854.p1, internal, 79770, 80011
-recovered pasa_asmbl_28854.p1, internal, 80173, 80327
Valid prediction for GeneMark_model.85941_t
Valid prediction for GeneMark_model.85964_t
Couldn't classify 124279, 124368
Couldn't classify 126492, 126655
Sorry, prediction pasa_asmbl_28857.p1 fails validation.
(GCC)	 GC	124279-124368	GT	AGG
(GAG)	 AG	125097-125196	GT	AAG
(GTT)	 AG	126492-126655	GG	TAG
-recovered pasa_asmbl_28857.p1, internal, 125097, 125196
Valid prediction for GeneMark_model.85935_t
Valid prediction for snap_scaffold_21-snap.2114-T1
Valid prediction for GeneMark_model.85937_t
Valid prediction for Augustus_model.g33308.t1
Valid prediction for snap_scaffold_21-snap.2128-T1
Valid prediction for GeneMark_model.85938_t
Valid prediction for GeneMark_model.85966_t
Couldn't classify 148523, 148661
Couldn't classify 152180, 152314
Sorry, prediction pasa_asmbl_29038.p1 fails validation.
(GTT)	 TG	148523-148661	GT	TGG
(GTG)	 AG	149009-149138	GT	GGG
(GAA)	 AG	149242-149333	GT	ATG
(TGA)	 AG	149612-149707	GT	GGG
(GGG)	 AG	149813-149890	GT	GAG
(TCT)	 AG	150317-150409	GT	TGG
(GAG)	 AG	150582-150703	GT	TGG
(CCG)	 AG	151177-151286	GT	ATG
(GTT)	 AG	151380-151539	GT	TGG
(TGG)	 AG	152180-152314	AT	ACA
-recovered pasa_asmbl_29038.p1, internal, 149009, 149138
-recovered pasa_asmbl_29038.p1, internal, 149242, 149333
-recovered pasa_asmbl_29038.p1, internal, 149612, 149707
-recovered pasa_asmbl_29038.p1, internal, 149813, 149890
-recovered pasa_asmbl_29038.p1, internal, 150317, 150409
-recovered pasa_asmbl_29038.p1, internal, 150582, 150703
-recovered pasa_asmbl_29038.p1, internal, 151177, 151286
-recovered pasa_asmbl_29038.p1, internal, 151380, 151539
Couldn't classify 69319, 69487
Couldn't classify 70103, 70208
Sorry, prediction CodingQuarry_transcript_32639-T1 fails validation.
(ATG)	 AG	66506-66584	GT	AAG
(ATG)	 AG	66728-66823	GT	AGG
(GTG)	 AG	67911-68096	GT	CAG
(CAT)	 AG	68442-68581	GT	ATG
(CCT)	 AG	68683-68790	GT	AGG
(GAG)	 AG	68980-69166	GT	CAG
(GTA)	 AG	69319-69487	GG	ATG
(GGG)	 GG	70103-70208	GT	AGG
(AAC)	 AG	70455-70581	GT	TGG
(GTT)	 AG	70851-70943	GT	CGG
(CTG)	 AG	71027-71170	GT	CGG
(CTC)	 AG	71273-71406	GT	AGG
(CGT)	 AG	71793-71980	GT	AGG
(GAA)	 AG	72113-72229	GT	AGG
(TCT)	 AG	72545-72731	GT	AGG
(GTG)	 AG	72872-72962	GT	AGG
(GCA)	 AG	73097-73210	GT	AGG
(GCT)	 AG	73336-73474	GT	AGG
(ACG)	 AG	73616-73793	GT	AGG
(GTG)	 AG	74037-74216	CC	GAC
-recovered CodingQuarry_transcript_32639-T1, initial, 66506, 66584
-recovered CodingQuarry_transcript_32639-T1, initial, 66728, 66823
-recovered CodingQuarry_transcript_32639-T1, terminal, 74037, 74216
-recovered CodingQuarry_transcript_32639-T1, internal, 66506, 66584
-recovered CodingQuarry_transcript_32639-T1, internal, 66728, 66823
-recovered CodingQuarry_transcript_32639-T1, internal, 67911, 68096
-recovered CodingQuarry_transcript_32639-T1, internal, 68442, 68581
-recovered CodingQuarry_transcript_32639-T1, internal, 68683, 68790
-recovered CodingQuarry_transcript_32639-T1, internal, 68980, 69166
-recovered CodingQuarry_transcript_32639-T1, internal, 70455, 70581
-recovered CodingQuarry_transcript_32639-T1, internal, 70851, 70943
-recovered CodingQuarry_transcript_32639-T1, internal, 71027, 71170
-recovered CodingQuarry_transcript_32639-T1, internal, 71273, 71406
-recovered CodingQuarry_transcript_32639-T1, internal, 71793, 71980
-recovered CodingQuarry_transcript_32639-T1, internal, 72113, 72229
-recovered CodingQuarry_transcript_32639-T1, internal, 72545, 72731
-recovered CodingQuarry_transcript_32639-T1, internal, 72872, 72962
-recovered CodingQuarry_transcript_32639-T1, internal, 73097, 73210
-recovered CodingQuarry_transcript_32639-T1, internal, 73336, 73474
-recovered CodingQuarry_transcript_32639-T1, internal, 73616, 73793
Valid prediction for GlimmerHMM_glimmerT_49643-T1
Valid prediction for GeneMark_model.85946_t
Valid prediction for Augustus_model.g33299.t1
Valid prediction for snap_scaffold_21-snap.2111-T1
Valid prediction for snap_scaffold_21-snap.2143-T1
Valid prediction for Augustus_model.g33302.t1
Valid prediction for GlimmerHMM_glimmerT_49640-T1
Valid prediction for snap_scaffold_21-snap.2138-T1
Valid prediction for snap_scaffold_21-snap.2123-T1
Valid prediction for snap_scaffold_21-snap.2131-T1
Valid prediction for pasa_asmbl_28853.p2
Valid prediction for GlimmerHMM_glimmerT_49644-T1
Valid prediction for Augustus_model.g33300.t1
Valid prediction for snap_scaffold_21-snap.2110-T1
Valid prediction for GeneMark_model.85960_t
Valid prediction for Augustus_model.g33306.t1
Valid prediction for snap_scaffold_21-snap.2139-T1
Valid prediction for snap_scaffold_21-snap.2150-T1
Valid prediction for GlimmerHMM_glimmerT_49651-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_21-snap.2125-T1
Valid prediction for snap_scaffold_21-snap.2127-T1
Couldn't classify 6747, 6903
Sorry, prediction pasa_asmbl_27993.p1 fails validation.
(TGC)	 AG	6747-6903	GT	GGG
(GTC)	 AG	7276-7340	GT	AGG
(ACA)	 AG	7442-7542	GT	ATG
(GTT)	 AG	8038-8089	GT	AGG
(GAG)	 AG	8306-8401	CC	AAC
-recovered pasa_asmbl_27993.p1, terminal, 8306, 8401
-recovered pasa_asmbl_27993.p1, internal, 6747, 6903
-recovered pasa_asmbl_27993.p1, internal, 7276, 7340
-recovered pasa_asmbl_27993.p1, internal, 7442, 7542
-recovered pasa_asmbl_27993.p1, internal, 8038, 8089
Valid prediction for GeneMark_model.85961_t
Valid prediction for GlimmerHMM_glimmerT_49632-T1
Valid prediction for GlimmerHMM_glimmerT_49645-T1
Valid prediction for GlimmerHMM_glimmerT_49639-T1
Valid prediction for GeneMark_model.85947_t
Valid prediction for snap_scaffold_21-snap.2134-T1
Valid prediction for GlimmerHMM_glimmerT_49642-T1
Valid prediction for snap_scaffold_21-snap.2140-T1
Valid prediction for Augustus_model.g33307.t1
Couldn't classify 136170, 136239
Couldn't classify 137843, 137890
Sorry, prediction pasa_asmbl_27987.p1 fails validation.
(ATC)	 AC	136170-136239	GT	GTG
(TCT)	 AG	136331-136446	GT	CTG
(GGA)	 AG	136581-136643	GT	AGG
(CAA)	 AG	136810-136893	GT	AGG
(GTG)	 AG	137147-137208	GT	AGG
(GGG)	 AG	137354-137456	GT	ACG
(GAC)	 AG	137843-137890	AG	GGA
-recovered pasa_asmbl_27987.p1, internal, 136331, 136446
-recovered pasa_asmbl_27987.p1, internal, 136581, 136643
-recovered pasa_asmbl_27987.p1, internal, 136810, 136893
-recovered pasa_asmbl_27987.p1, internal, 137147, 137208
-recovered pasa_asmbl_27987.p1, internal, 137354, 137456
Valid prediction for snap_scaffold_21-snap.2122-T1
Valid prediction for GeneMark_model.85940_t
Valid prediction for GeneMark_model.85968_t
Valid prediction for GeneMark_model.85949_t
Valid prediction for GlimmerHMM_glimmerT_49635-T1
Valid prediction for snap_scaffold_21-snap.2132-T1
Valid prediction for GlimmerHMM_glimmerT_49634-T1
Valid prediction for Augustus_model.g33301.t1
Valid prediction for GeneMark_model.85970_t
Valid prediction for CodingQuarry_transcript_32641-T1
Valid prediction for GeneMark_model.85963_t
Valid prediction for snap_scaffold_21-snap.2124-T1
Valid prediction for snap_scaffold_21-snap.2129-T1
Valid prediction for snap_scaffold_21-snap.2119-T1
Valid prediction for CodingQuarry_transcript_32634-T1
Valid prediction for snap_scaffold_21-snap.2148-T1
Valid prediction for Augustus_model.g33292.t1
Valid prediction for Augustus_model.g33305.t1
Valid prediction for GeneMark_model.85958_t
Valid prediction for pasa_asmbl_27991.p1
Valid prediction for snap_scaffold_21-snap.2135-T1
Valid prediction for CodingQuarry_transcript_32635-T1
Valid prediction for GeneMark_model.85965_t
Valid prediction for snap_scaffold_21-snap.2121-T1
Couldn't classify 141172, 141309
Couldn't classify 143079, 143128
Sorry, prediction pasa_asmbl_27985.p1 fails validation.
(TTC)	 GC	141172-141309	GT	AGG
(GCG)	 AG	141801-141975	GT	AGG
(TCA)	 AG	142107-142258	GT	AGG
(AAC)	 AG	142524-142650	GT	CGG
(ACA)	 AG	143079-143128	GA	AGG
-recovered pasa_asmbl_27985.p1, terminal, 141801, 141975
-recovered pasa_asmbl_27985.p1, internal, 141801, 141975
-recovered pasa_asmbl_27985.p1, internal, 142107, 142258
-recovered pasa_asmbl_27985.p1, internal, 142524, 142650
Valid prediction for snap_scaffold_21-snap.2145-T1
Valid prediction for snap_scaffold_21-snap.2133-T1
Valid prediction for Augustus_model.g33293.t1
Valid prediction for CodingQuarry_transcript_32642-T1
Valid prediction for GlimmerHMM_glimmerT_49650-T1
Couldn't classify 143830, 143915
Sorry, prediction pasa_asmbl_27984.p1 fails validation.
(GAT)	 GT	143830-143915	GT	AGG
(GTT)	 AG	144021-144141	GT	GGG
(ATC)	 AG	144279-144470	GT	TGG
(ATA)	 AG	144588-144828	GT	AGG
(ATT)	 AG	145000-145373	GT	CGG
(TGT)	 AG	145488-145580	GT	AGG
(GAA)	 AG	145668-145841	CC	AAC
-recovered pasa_asmbl_27984.p1, terminal, 145668, 145841
-recovered pasa_asmbl_27984.p1, internal, 144021, 144141
-recovered pasa_asmbl_27984.p1, internal, 144279, 144470
-recovered pasa_asmbl_27984.p1, internal, 144588, 144828
-recovered pasa_asmbl_27984.p1, internal, 145000, 145373
-recovered pasa_asmbl_27984.p1, internal, 145488, 145580
Valid prediction for GeneMark_model.85936_t
Valid prediction for GeneMark_model.85959_t
Valid prediction for Augustus_model.g33296.t1
Valid prediction for GlimmerHMM_glimmerT_49652-T1
Valid prediction for Augustus_model.g33309.t1
Valid prediction for GlimmerHMM_glimmerT_49641-T1
Couldn't classify 138238, 138321
Couldn't classify 138869, 139015
Sorry, prediction pasa_asmbl_27986.p1 fails validation.
(CTT)	 GT	138238-138321	GT	AGG
(GCT)	 AG	138417-138557	GT	CGG
(GTG)	 AG	138869-139015	AC	CCA
-recovered pasa_asmbl_27986.p1, internal, 138417, 138557
Valid prediction for snap_scaffold_21-snap.2136-T1
Valid prediction for snap_scaffold_21-snap.2112-T1
Valid prediction for GeneMark_model.85939_t
Valid prediction for snap_scaffold_21-snap.2118-T1
Valid prediction for GeneMark_model.85955_t
Valid prediction for CodingQuarry_transcript_32633-T1
Valid prediction for GlimmerHMM_glimmerT_49654-T1
Valid prediction for GeneMark_model.85942_t
Valid prediction for pasa_asmbl_27983.p1
Valid prediction for GeneMark_model.85972_t
Valid prediction for GlimmerHMM_glimmerT_49631-T1
Valid prediction for snap_scaffold_21-snap.2113-T1
Valid prediction for snap_scaffold_21-snap.2141-T1
Valid prediction for Augustus_model.g33304.t1
Valid prediction for GlimmerHMM_glimmerT_49648-T1
Valid prediction for GlimmerHMM_glimmerT_49636-T1
Valid prediction for Augustus_model.g33303.t1
Valid prediction for pasa_asmbl_27988.p1
Valid prediction for GeneMark_model.85956_t
Valid prediction for GlimmerHMM_glimmerT_49638-T1
Valid prediction for snap_scaffold_21-snap.2147-T1
Valid prediction for GeneMark_model.85945_t
Valid prediction for GlimmerHMM_glimmerT_49649-T1
Valid prediction for Augustus_model.g33297.t1
Valid prediction for HiQ_model.g33294.t1
Valid prediction for GlimmerHMM_glimmerT_49633-T1
Valid prediction for snap_scaffold_21-snap.2116-T1
Valid prediction for GlimmerHMM_glimmerT_49647-T1
Valid prediction for snap_scaffold_21-snap.2146-T1
Valid prediction for GeneMark_model.85957_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4359, rend_intergenic: 2769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13694, rend_intergenic: 7641  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26785, rend_intergenic: 16211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82513, rend_intergenic: 71007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91110, rend_intergenic: 90543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93844, rend_intergenic: 91966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115696, rend_intergenic: 113789  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122342, rend_intergenic: 119306  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139789, rend_intergenic: 123177  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153038, rend_intergenic: 143792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160968, rend_intergenic: 154396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 162577
-exon list size: 674


building trellis

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18.5    
18.6    
18.8    
18.9    
19.1    
19.2    
19.4    
19.5    
19.7    
19.8    
20.0    
20.1    
20.3    
20.4    
20.6    
20.7    
20.9    
21.0    
21.2    
21.3    
21.4    
21.6    
21.7    
21.9    
22.0    
22.2    
22.3    
22.5    
22.6    
22.8    
22.9    
23.1    
23.2    
23.4    
23.5    
23.7    
23.8    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.9    
25.0    
25.1    
25.3    
25.4    
25.6    
25.7    
25.9    
26.0    
26.2    
26.3    
26.5    
26.6    
26.8    
26.9    
27.1    
27.2    
27.4    
27.5    
27.7    
27.8    
28.0    
28.1    
28.3    
28.4    
28.6    
28.7    
28.8    
29.0    
29.1    
29.3    
29.4    
29.6    
29.7    
29.9    
30.0    
30.2    
30.3    
30.5    
30.6    
30.8    
30.9    
31.1    
31.2    
31.4    
31.5    
31.7    
31.8    
32.0    
32.1    
32.2    
32.4    
32.5    
32.7    
32.8    
33.0    
33.1    
33.3    
33.4    
33.6    
33.7    
33.9    
34.0    
34.2    
34.3    
34.5    
34.6    
34.8    
34.9    
35.1    
35.2    
35.4    
35.5    
35.7    
35.8    
35.9    
36.1    
36.2    
36.4    
36.5    
36.7    
36.8    
37.0    
37.1    
37.3    
37.4    
37.6    
37.7    
37.9    
38.0    
38.2    
38.3    
38.5    
38.6    
38.8    
38.9    
39.1    
39.2    
39.3    
39.5    
39.6    
39.8    
39.9    
40.1    
40.2    
40.4    
40.5    
40.7    
40.8    
41.0    
41.1    
41.3    
41.4    
41.6    
41.7    
41.9    
42.0    
42.2    
42.3    
42.5    
42.6    
42.8    
42.9    
43.0    
43.2    
43.3    
43.5    
43.6    
43.8    
43.9    
44.1    
44.2    
44.4    
44.5    
44.7    
44.8    
45.0    
45.1    
45.3    
45.4    
45.6    
45.7    
45.9    
46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.2    
47.3    
47.5    
47.6    
47.8    
47.9    
48.1    
48.2    
48.4    
48.5    
48.7    
48.8    
49.0    
49.1    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.8    
51.9    
52.1    
52.2    
52.4    
52.5    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.3    
54.4    
54.6    
54.7    
54.9    
55.0    
55.2    
55.3    
55.5    
55.6    
55.8    
55.9    
56.1    
56.2    
56.4    
56.5    
56.7    
56.8    
57.0    
57.1    
57.2    
57.4    
57.5    
57.7    
57.8    
58.0    
58.1    
58.3    
58.4    
58.6    
58.7    
58.9    
59.0    
59.2    
59.3    
59.5    
59.6    
59.8    
59.9    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.4    
61.5    
61.7    
61.8    
62.0    
62.1    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.8    
63.9    
64.1    
64.2    
64.3    
64.5    
64.6    
64.8    
64.9    
65.1    
65.2    
65.4    
65.5    
65.7    
65.8    
66.0    
66.1    
66.3    
66.4    
66.6    
66.7    
66.9    
67.0    
67.2    
67.3    
67.5    
67.6    
67.8    
67.9    
68.0    
68.2    
68.3    
68.5    
68.6    
68.8    
68.9    
69.1    
69.2    
69.4    
69.5    
69.7    
69.8    
70.0    
70.1    
70.3    
70.4    
70.6    
70.7    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.9    
72.0    
72.2    
72.3    
72.5    
72.6    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
74.0    
74.1    
74.3    
74.4    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.2    
76.3    
76.5    
76.6    
76.8    
76.9    
77.1    
77.2    
77.4    
77.5    
77.7    
77.8    
78.0    
78.1    
78.3    
78.4    
78.6    
78.7    
78.8    
79.0    
79.1    
79.3    
79.4    
79.6    
79.7    
79.9    
80.0    
80.2    
80.3    
80.5    
80.6    
80.8    
80.9    
81.1    
81.2    
81.4    
81.5    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.7    
82.8    
83.0    
83.1    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.2    
84.3    
84.5    
84.6    
84.8    
84.9    
85.1    
85.2    
85.4    
85.5    
85.7    
85.8    
85.9    
86.1    
86.2    
86.4    
86.5    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.2    
88.3    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.8    
89.9    
90.1    
90.2    
90.4    
90.5    
90.7    
90.8    
91.0    
91.1    
91.3    
91.4    
91.6    
91.7    
91.9    
92.0    
92.2    
92.3    
92.5    
92.6    
92.8    
92.9    
93.0    
93.2    
93.3    
93.5    
93.6    
93.8    
93.9    
94.1    
94.2    
94.4    
94.5    
94.7    
94.8    
95.0    
95.1    
95.3    
95.4    
95.6    
95.7    
95.9    
96.0    
96.2    
96.3    
96.4    
96.6    
96.7    
96.9    
97.0    
97.2    
97.3    
97.5    
97.6    
97.8    
97.9    
98.1    
98.2    
98.4    
98.5    
98.7    
98.8    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 27 predictions from path traversal
Error with prediction: snap lend_intergenic: 4359, rend_intergenic: 2769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13694, rend_intergenic: 7641  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26785, rend_intergenic: 16211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82513, rend_intergenic: 71007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91110, rend_intergenic: 90543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93844, rend_intergenic: 91966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115696, rend_intergenic: 113789  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122342, rend_intergenic: 119306  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139789, rend_intergenic: 123177  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153038, rend_intergenic: 143792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160968, rend_intergenic: 154396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 24 predictions persist after filtering for low support