-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_21/scaffold_21_6793328-6976633

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.85162_t
Valid prediction for GeneMark_model.85180_t
Valid prediction for GlimmerHMM_glimmerT_49155-T1
Valid prediction for snap_scaffold_21-snap.1420-T1
Valid prediction for GeneMark_model.85168_t
Valid prediction for GlimmerHMM_glimmerT_49148-T1
Valid prediction for GeneMark_model.85153_t
Valid prediction for GlimmerHMM_glimmerT_49140-T1
Valid prediction for snap_scaffold_21-snap.1431-T1
Valid prediction for snap_scaffold_21-snap.1444-T1
Valid prediction for GlimmerHMM_glimmerT_49162-T1
Valid prediction for GeneMark_model.85187_t
Valid prediction for GlimmerHMM_glimmerT_49142-T1
Valid prediction for GeneMark_model.85150_t
Valid prediction for snap_scaffold_21-snap.1417-T1
Valid prediction for GlimmerHMM_glimmerT_49164-T1
Valid prediction for GeneMark_model.85166_t
Valid prediction for GeneMark_model.85173_t
Valid prediction for GlimmerHMM_glimmerT_49144-T1
Valid prediction for GeneMark_model.85171_t
Valid prediction for GlimmerHMM_glimmerT_49130-T1
Valid prediction for snap_scaffold_21-snap.1409-T1
Valid prediction for snap_scaffold_21-snap.1414-T1
Valid prediction for Augustus_model.g32949.t1
Valid prediction for GeneMark_model.85174_t
Valid prediction for GeneMark_model.85176_t
Valid prediction for GlimmerHMM_glimmerT_49131-T1
Valid prediction for snap_scaffold_21-snap.1436-T1
Valid prediction for HiQ_model.g32939.t1
Valid prediction for snap_scaffold_21-snap.1424-T1
Valid prediction for GeneMark_model.85148_t
Valid prediction for Augustus_model.g32946.t1
Valid prediction for snap_scaffold_21-snap.1426-T1
Valid prediction for snap_scaffold_21-snap.1434-T1
Valid prediction for GeneMark_model.85185_t
Valid prediction for GeneMark_model.85164_t
Valid prediction for GeneMark_model.85182_t
Valid prediction for GeneMark_model.85152_t
Valid prediction for GeneMark_model.85157_t
Valid prediction for CodingQuarry_transcript_32543-T1
Valid prediction for GlimmerHMM_glimmerT_49156-T1
Valid prediction for GeneMark_model.85160_t
Valid prediction for GlimmerHMM_glimmerT_49145-T1
Valid prediction for GeneMark_model.85178_t
Valid prediction for GeneMark_model.85145_t
Valid prediction for snap_scaffold_21-snap.1430-T1
Valid prediction for GlimmerHMM_glimmerT_49157-T1
Valid prediction for snap_scaffold_21-snap.1421-T1
Valid prediction for snap_scaffold_21-snap.1429-T1
Valid prediction for GlimmerHMM_glimmerT_49153-T1
Valid prediction for GlimmerHMM_glimmerT_49137-T1
Valid prediction for pasa_asmbl_28975.p1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_21-snap.1435-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_49129-T1
Valid prediction for GlimmerHMM_glimmerT_49151-T1
Valid prediction for Augustus_model.g32953.t1
Valid prediction for GeneMark_model.85172_t
Valid prediction for snap_scaffold_21-snap.1411-T1
Valid prediction for GlimmerHMM_glimmerT_49158-T1
Valid prediction for GeneMark_model.85169_t
Valid prediction for GeneMark_model.85165_t
Valid prediction for GlimmerHMM_glimmerT_49132-T1
Valid prediction for snap_scaffold_21-snap.1443-T1
Valid prediction for HiQ_model.g32950.t1
Valid prediction for Augustus_model.g32938.t1
Valid prediction for GeneMark_model.85170_t
Valid prediction for GlimmerHMM_glimmerT_49141-T1
Valid prediction for GlimmerHMM_glimmerT_49163-T1
Couldn't classify 28136, 28489
Sorry, prediction pasa_asmbl_27784.p1 fails validation.
(AAG)	 GC	28136-28489	GT	GAG
Valid prediction for snap_scaffold_21-snap.1425-T1
Couldn't classify 10816, 11263
Couldn't classify 11597, 11601
Sorry, prediction CodingQuarry_transcript_32548-T1 fails validation.
(ATG)	 TG	10816-11263	CT	ACC
(CTT)	 AC	11597-11601	GG	GAG
Valid prediction for snap_scaffold_21-snap.1410-T1
Valid prediction for GlimmerHMM_glimmerT_49134-T1
Valid prediction for snap_scaffold_21-snap.1412-T1
Valid prediction for GlimmerHMM_glimmerT_49135-T1
Valid prediction for GlimmerHMM_glimmerT_49133-T1
Valid prediction for GlimmerHMM_glimmerT_49154-T1
Valid prediction for snap_scaffold_21-snap.1428-T1
Valid prediction for GlimmerHMM_glimmerT_49138-T1
Valid prediction for snap_scaffold_21-snap.1433-T1
Valid prediction for GlimmerHMM_glimmerT_49161-T1
Valid prediction for GlimmerHMM_glimmerT_49160-T1
Valid prediction for pasa_asmbl_27778.p2
Valid prediction for GeneMark_model.85177_t
Valid prediction for GeneMark_model.85144_t
Valid prediction for Augustus_model.g32954.t1
Valid prediction for snap_scaffold_21-snap.1423-T1
Valid prediction for GeneMark_model.85188_t
Valid prediction for snap_scaffold_21-snap.1419-T1
Valid prediction for GeneMark_model.85181_t
Valid prediction for Augustus_model.g32945.t1
Valid prediction for GeneMark_model.85159_t
Valid prediction for snap_scaffold_21-snap.1415-T1
Valid prediction for GeneMark_model.85147_t
Valid prediction for GeneMark_model.85156_t
Valid prediction for Augustus_model.g32955.t1
Valid prediction for snap_scaffold_21-snap.1422-T1
Valid prediction for GlimmerHMM_glimmerT_49143-T1
Valid prediction for snap_scaffold_21-snap.1432-T1
Valid prediction for snap_scaffold_21-snap.1416-T1
Valid prediction for GeneMark_model.85158_t
Couldn't classify 42765, 42981
Sorry, prediction pasa_asmbl_27779.p1 fails validation.
(CAC)	 CC	42765-42981	GT	AGG
(TGC)	 AG	43417-43580	GT	CTG
(TGT)	 AG	43793-43898	GT	ATG
(ACC)	 AG	45408-45500	GT	AGG
(ACA)	 AG	45653-45769	GT	GGG
(AGT)	 AG	46343-46498	GT	AGG
(CTT)	 AG	46715-46828	GT	GGG
(AGA)	 AG	46955-47023	GT	TGG
(TGA)	 AG	47231-47317	GT	ACG
(CGG)	 AG	47475-47603	GT	GGG
(ATG)	 AG	47808-47939	GT	AGG
(ACA)	 AG	48048-48176	GT	AGG
(ATA)	 AG	48282-48401	GT	CGG
(ACG)	 AG	49255-49377	GT	GGG
(ACA)	 AG	49710-49832	GC	AGG
(ATA)	 AG	49992-50111	GT	AGG
(ACA)	 AG	50301-50429	GT	GGG
(CGA)	 AG	50587-50757	GT	GGG
(CTG)	 AG	50997-51080	GT	AGG
(ACA)	 AG	51455-51583	GT	TGG
(ATG)	 AG	51676-51813	GT	AGG
(GCG)	 AG	52010-52150	GT	GGG
(ATG)	 AG	52623-52751	GT	CGG
(ACC)	 AG	53707-53874	GT	AGG
(TGA)	 AG	54434-54523	GT	AGG
(AAG)	 AG	54741-54872	GT	AGG
(ATG)	 AG	55116-55267	CA	AAC
-recovered pasa_asmbl_27779.p1, initial, 47808, 47939
add_exon() Sorry, pasa_asmbl_27779.p1 51676-51813-initial-1 is invalid.
-recovered pasa_asmbl_27779.p1, initial, 51676, 51813
add_exon() Sorry, pasa_asmbl_27779.p1 52623-52751-initial-1 is invalid.
-recovered pasa_asmbl_27779.p1, initial, 52623, 52751
-recovered pasa_asmbl_27779.p1, terminal, 55116, 55267
-recovered pasa_asmbl_27779.p1, internal, 43417, 43580
-recovered pasa_asmbl_27779.p1, internal, 43793, 43898
-recovered pasa_asmbl_27779.p1, internal, 45408, 45500
-recovered pasa_asmbl_27779.p1, internal, 45653, 45769
-recovered pasa_asmbl_27779.p1, internal, 46343, 46498
-recovered pasa_asmbl_27779.p1, internal, 46715, 46828
-recovered pasa_asmbl_27779.p1, internal, 46955, 47023
-recovered pasa_asmbl_27779.p1, internal, 47231, 47317
-recovered pasa_asmbl_27779.p1, internal, 47475, 47603
-recovered pasa_asmbl_27779.p1, internal, 47808, 47939
-recovered pasa_asmbl_27779.p1, internal, 48048, 48176
-recovered pasa_asmbl_27779.p1, internal, 48282, 48401
-recovered pasa_asmbl_27779.p1, internal, 49255, 49377
-recovered pasa_asmbl_27779.p1, internal, 49710, 49832
-recovered pasa_asmbl_27779.p1, internal, 49992, 50111
-recovered pasa_asmbl_27779.p1, internal, 50301, 50429
-recovered pasa_asmbl_27779.p1, internal, 50587, 50757
-recovered pasa_asmbl_27779.p1, internal, 50997, 51080
-recovered pasa_asmbl_27779.p1, internal, 51455, 51583
-recovered pasa_asmbl_27779.p1, internal, 51676, 51813
-recovered pasa_asmbl_27779.p1, internal, 52010, 52150
-recovered pasa_asmbl_27779.p1, internal, 52623, 52751
-recovered pasa_asmbl_27779.p1, internal, 53707, 53874
-recovered pasa_asmbl_27779.p1, internal, 54434, 54523
-recovered pasa_asmbl_27779.p1, internal, 54741, 54872
Valid prediction for GlimmerHMM_glimmerT_49146-T1
Couldn't classify 116696, 116754
Sorry, prediction pasa_asmbl_27777.p3 fails validation.
(GAG)	 GG	116696-116754	GT	CGG
(GCT)	 AG	116942-116984	GT	AGG
(GGG)	 AG	117139-117357	AA	AAA
-recovered pasa_asmbl_27777.p3, terminal, 117139, 117357
-recovered pasa_asmbl_27777.p3, internal, 116942, 116984
Valid prediction for GeneMark_model.85154_t
Valid prediction for GeneMark_model.85155_t
Valid prediction for GeneMark_model.85161_t
Couldn't classify 27152, 27383
Couldn't classify 27525, 28075
Sorry, prediction pasa_asmbl_27785.p1 fails validation.
(AGT)	 CC	27152-27383	GT	AGG
(ATG)	 AG	27525-28075	GA	GGG
Valid prediction for snap_scaffold_21-snap.1437-T1
Valid prediction for GlimmerHMM_glimmerT_49159-T1
Couldn't classify 155460, 155602
Sorry, prediction pasa_asmbl_28226.p1 fails validation.
(ATG)	 CC	152493-152675	GT	CGG
(GAC)	 AG	153421-153486	GT	AGG
(GAG)	 AG	153598-153703	GT	AGG
(CCA)	 AG	153855-153980	GT	CTG
(GTA)	 AG	154118-154252	GT	AGG
(CTC)	 AG	154343-154521	GT	AGG
(GTG)	 AG	154622-154730	GT	CGG
(ATG)	 AG	154941-155040	GT	TGG
(GAA)	 AG	155185-155294	GT	TGG
(CTG)	 AG	155460-155602	GG	GAG
-recovered pasa_asmbl_28226.p1, initial, 152493, 152675
add_exon() Sorry, pasa_asmbl_28226.p1 154941-155040-initial-1 is invalid.
-recovered pasa_asmbl_28226.p1, initial, 154941, 155040
-recovered pasa_asmbl_28226.p1, internal, 153421, 153486
-recovered pasa_asmbl_28226.p1, internal, 153598, 153703
-recovered pasa_asmbl_28226.p1, internal, 153855, 153980
-recovered pasa_asmbl_28226.p1, internal, 154118, 154252
-recovered pasa_asmbl_28226.p1, internal, 154343, 154521
-recovered pasa_asmbl_28226.p1, internal, 154622, 154730
-recovered pasa_asmbl_28226.p1, internal, 154941, 155040
-recovered pasa_asmbl_28226.p1, internal, 155185, 155294
Valid prediction for HiQ_model.g32952.t1
Valid prediction for GlimmerHMM_glimmerT_49147-T1
Valid prediction for GeneMark_model.85184_t
Valid prediction for GeneMark_model.85167_t
Valid prediction for Augustus_model.g32940.t1
Valid prediction for snap_scaffold_21-snap.1408-T1
Valid prediction for GeneMark_model.85189_t
Valid prediction for GlimmerHMM_glimmerT_49152-T1
Valid prediction for snap_scaffold_21-snap.1439-T1
Valid prediction for CodingQuarry_transcript_32546-T1
Valid prediction for GeneMark_model.85146_t
Valid prediction for GeneMark_model.85183_t
Valid prediction for snap_scaffold_21-snap.1440-T1
Valid prediction for snap_scaffold_21-snap.1442-T1
Valid prediction for Augustus_model.g32948.t1
Valid prediction for GeneMark_model.85179_t
Valid prediction for Augustus_model.g32947.t1
Valid prediction for Augustus_model.g32942.t1
Valid prediction for snap_scaffold_21-snap.1413-T1
Valid prediction for snap_scaffold_21-snap.1438-T1
Valid prediction for Augustus_model.g32944.t1
Valid prediction for Augustus_model.g32951.t1
Valid prediction for GeneMark_model.85175_t
Couldn't classify 178583, 178855
Sorry, prediction pasa_asmbl_27773.p1 fails validation.
(ATG)	 TA	177977-178151	GT	TGG
(GTA)	 AG	178264-178460	GT	AGG
(GAG)	 AG	178583-178855	TA	ACT
-recovered pasa_asmbl_27773.p1, initial, 177977, 178151
-recovered pasa_asmbl_27773.p1, internal, 178264, 178460
Valid prediction for GlimmerHMM_glimmerT_49139-T1
Valid prediction for Augustus_model.g32943.t1
Valid prediction for snap_scaffold_21-snap.1418-T1
Valid prediction for snap_scaffold_21-snap.1441-T1
Valid prediction for GlimmerHMM_glimmerT_49149-T1
Valid prediction for Augustus_model.g32941.t1
Valid prediction for GlimmerHMM_glimmerT_49150-T1
Valid prediction for GeneMark_model.85151_t
Valid prediction for GeneMark_model.85186_t
Couldn't classify 147481, 147537
Sorry, prediction pasa_asmbl_27774.p1 fails validation.
(GAG)	 AT	147481-147537	GT	AGG
(GTG)	 AG	147629-147729	GT	GGG
(ATT)	 AG	147882-148011	GT	AGG
(CTC)	 AG	148106-148261	GT	AGG
(GTG)	 AG	148505-148576	GT	AGG
(GGA)	 AG	148808-148894	GT	AGG
(GAG)	 AG	149173-149316	GT	AGG
(AGG)	 AG	149489-149578	GT	AGG
(ACG)	 AG	149671-149765	GT	AGG
(TCT)	 AG	149895-149990	GT	AGG
(TTT)	 AG	150184-150229	GT	ATG
(AAC)	 AG	150326-150413	GT	AGG
(AAT)	 AG	150573-150643	GT	CGG
(GGA)	 AG	150864-150872	AT	AGA
-recovered pasa_asmbl_27774.p1, terminal, 150864, 150872
-recovered pasa_asmbl_27774.p1, internal, 147629, 147729
-recovered pasa_asmbl_27774.p1, internal, 147882, 148011
-recovered pasa_asmbl_27774.p1, internal, 148106, 148261
-recovered pasa_asmbl_27774.p1, internal, 148505, 148576
-recovered pasa_asmbl_27774.p1, internal, 148808, 148894
-recovered pasa_asmbl_27774.p1, internal, 149173, 149316
-recovered pasa_asmbl_27774.p1, internal, 149489, 149578
-recovered pasa_asmbl_27774.p1, internal, 149671, 149765
-recovered pasa_asmbl_27774.p1, internal, 149895, 149990
-recovered pasa_asmbl_27774.p1, internal, 150184, 150229
-recovered pasa_asmbl_27774.p1, internal, 150326, 150413
-recovered pasa_asmbl_27774.p1, internal, 150573, 150643
Valid prediction for snap_scaffold_21-snap.1427-T1
Valid prediction for GeneMark_model.85163_t
Valid prediction for GeneMark_model.85149_t
Valid prediction for GlimmerHMM_glimmerT_49136-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 17621, rend_intergenic: 12960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38933, rend_intergenic: 33553  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41206, rend_intergenic: 39013  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50038, rend_intergenic: 42919  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81061, rend_intergenic: 65950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91617, rend_intergenic: 86685  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93209, rend_intergenic: 92754  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95714, rend_intergenic: 93485  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98305, rend_intergenic: 96808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112203, rend_intergenic: 102190  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144940, rend_intergenic: 127802  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150400, rend_intergenic: 145529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 98930, rend_intergenic: 98927  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 183306
-exon list size: 838


building trellis

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36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.1    
37.3    
37.4    
37.5    
37.6    
37.7    
37.9    
38.0    
38.1    
38.2    
38.3    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.2    
39.3    
39.4    
39.5    
39.6    
39.8    
39.9    
40.0    
40.1    
40.2    
40.4    
40.5    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.7    
41.8    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.6    
42.7    
42.9    
43.0    
43.1    
43.2    
43.3    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.2    
44.3    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.1    
45.2    
45.4    
45.5    
45.6    
45.7    
45.8    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.7    
46.8    
46.9    
47.0    
47.1    
47.3    
47.4    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.2    
48.3    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.7    
51.8    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.2    
54.3    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.3    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.6    
59.8    
59.9    
60.0    
60.1    
60.2    
60.4    
60.5    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.1    
75.2    
75.4    
75.5    
75.6    
75.7    
75.8    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.2    
78.3    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.6    
79.8    
79.9    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.8    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.6    
82.7    
82.9    
83.0    
83.1    
83.2    
83.3    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.2    
84.3    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.2    
85.4    
85.5    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.1    
87.3    
87.4    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.7    
91.8    
91.9    
92.0    
92.1    
92.3    
92.4    
92.5    
92.6    
92.7    
92.9    
93.0    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.5    
94.6    
94.8    
94.9    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.7    
95.8    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.2    
98.3    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 17621, rend_intergenic: 12960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38933, rend_intergenic: 33553  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41206, rend_intergenic: 39013  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50038, rend_intergenic: 42919  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81061, rend_intergenic: 65950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91617, rend_intergenic: 86685  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93209, rend_intergenic: 92754  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95714, rend_intergenic: 93485  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98305, rend_intergenic: 96808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112203, rend_intergenic: 102190  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144940, rend_intergenic: 127802  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150400, rend_intergenic: 145529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 98930, rend_intergenic: 98927  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 21 predictions persist after filtering for low support