-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_21/scaffold_21_6001143-6164406

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_48994-T1
Valid prediction for GeneMark_model.84970_t
Valid prediction for GeneMark_model.84930_t
Valid prediction for snap_scaffold_21-snap.1223-T1
Valid prediction for Augustus_model.g32828.t1
Valid prediction for Augustus_model.g32839.t1
Valid prediction for snap_scaffold_21-snap.1233-T1
Valid prediction for Augustus_model.g32834.t1
Valid prediction for snap_scaffold_21-snap.1230-T1
Valid prediction for snap_scaffold_21-snap.1214-T1
Valid prediction for GeneMark_model.84969_t
Valid prediction for GeneMark_model.84942_t
Valid prediction for snap_scaffold_21-snap.1234-T1
Valid prediction for GeneMark_model.84933_t
Valid prediction for GlimmerHMM_glimmerT_49001-T1
Valid prediction for Augustus_model.g32827.t1
Valid prediction for GeneMark_model.84928_t
Valid prediction for snap_scaffold_21-snap.1243-T1
Valid prediction for Augustus_model.g32822.t1
Couldn't classify 127879, 127950
Sorry, prediction pasa_asmbl_28637.p1 fails validation.
(AAA)	 GC	127879-127950	GT	TAG
(TCC)	 AG	128159-128471	GT	CGG
(CAA)	 AG	128547-128659	GT	AGG
(ACG)	 AG	128820-128939	GT	AGG
(ATC)	 AG	129092-129219	GT	AAG
(CGT)	 AG	129343-129466	GT	TCG
(TTC)	 AG	129602-129731	GT	AAG
(TGG)	 AG	130031-130194	CC	GAC
-recovered pasa_asmbl_28637.p1, terminal, 130031, 130194
-recovered pasa_asmbl_28637.p1, internal, 128159, 128471
-recovered pasa_asmbl_28637.p1, internal, 128547, 128659
-recovered pasa_asmbl_28637.p1, internal, 128820, 128939
-recovered pasa_asmbl_28637.p1, internal, 129092, 129219
-recovered pasa_asmbl_28637.p1, internal, 129343, 129466
-recovered pasa_asmbl_28637.p1, internal, 129602, 129731
Valid prediction for GlimmerHMM_glimmerT_48990-T1
Valid prediction for GeneMark_model.84950_t
Valid prediction for Augustus_model.g32836.t1
Valid prediction for GeneMark_model.84945_t
Valid prediction for GeneMark_model.84952_t
Valid prediction for snap_scaffold_21-snap.1251-T1
Valid prediction for Augustus_model.g32833.t1
Valid prediction for snap_scaffold_21-snap.1241-T1
Valid prediction for GeneMark_model.84936_t
Valid prediction for CodingQuarry_transcript_32511-T1
Valid prediction for GlimmerHMM_glimmerT_48997-T1
Valid prediction for Augustus_model.g32831.t1
Couldn't classify 126081, 126135
Couldn't classify 127093, 127518
Sorry, prediction pasa_asmbl_28635.p1 fails validation.
(TTC)	 GT	126081-126135	GT	TGG
(ATA)	 AG	126858-127006	GT	AGG
(CCC)	 AG	127093-127518	CC	CCC
-recovered pasa_asmbl_28635.p1, internal, 126858, 127006
Valid prediction for snap_scaffold_21-snap.1219-T1
Valid prediction for pasa_asmbl_28633.p1
Valid prediction for GlimmerHMM_glimmerT_48989-T1
Valid prediction for snap_scaffold_21-snap.1228-T1
Valid prediction for GeneMark_model.84938_t
Valid prediction for Augustus_model.g32829.t1
Valid prediction for Augustus_model.g32832.t1
Couldn't classify 111600, 111767
Couldn't classify 113342, 113362
Sorry, prediction pasa_asmbl_28631.p1 fails validation.
(ATT)	 TG	111600-111767	GT	AGG
(GAG)	 AG	111912-112097	GT	AGG
(GGT)	 AG	112200-112311	GT	AGG
(AAA)	 AG	112406-112565	GT	AGG
(GTG)	 AG	112763-112851	GT	CGG
(AGG)	 AG	112949-113076	GT	AAG
(ACC)	 AG	113342-113362	TT	ACT
-recovered pasa_asmbl_28631.p1, internal, 111912, 112097
-recovered pasa_asmbl_28631.p1, internal, 112200, 112311
-recovered pasa_asmbl_28631.p1, internal, 112406, 112565
-recovered pasa_asmbl_28631.p1, internal, 112763, 112851
-recovered pasa_asmbl_28631.p1, internal, 112949, 113076
Valid prediction for Augustus_model.g32820.t1
Valid prediction for GeneMark_model.84960_t
Valid prediction for snap_scaffold_21-snap.1220-T1
Couldn't classify 50445, 50629
Couldn't classify 50713, 50836
Sorry, prediction pasa_asmbl_29000.p1 fails validation.
(AAG)	 AG	50445-50629	GT	TGG
(CAT)	 AG	50713-50836	AT	ACA
-recovered pasa_asmbl_29000.p1, internal, 50445, 50629
Valid prediction for GeneMark_model.84963_t
Valid prediction for GlimmerHMM_glimmerT_49006-T1
Valid prediction for GeneMark_model.84964_t
Valid prediction for Augustus_model.g32823.t1
Valid prediction for GeneMark_model.84949_t
Valid prediction for GeneMark_model.84957_t
Valid prediction for GlimmerHMM_glimmerT_48991-T1
Valid prediction for GlimmerHMM_glimmerT_49003-T1
Valid prediction for Augustus_model.g32824.t1
Valid prediction for GlimmerHMM_glimmerT_49000-T1
Valid prediction for Augustus_model.g32830.t1
Valid prediction for Augustus_model.g32826.t1
Valid prediction for GeneMark_model.84955_t
Valid prediction for snap_scaffold_21-snap.1247-T1
Valid prediction for snap_scaffold_21-snap.1248-T1
Valid prediction for Augustus_model.g32837.t1
Valid prediction for GeneMark_model.84961_t
Valid prediction for GeneMark_model.84947_t
Valid prediction for snap_scaffold_21-snap.1245-T1
Valid prediction for snap_scaffold_21-snap.1244-T1
Valid prediction for GlimmerHMM_glimmerT_49002-T1
Valid prediction for GeneMark_model.84940_t
Valid prediction for GeneMark_model.84954_t
Valid prediction for GlimmerHMM_glimmerT_48998-T1
Valid prediction for snap_scaffold_21-snap.1216-T1
Valid prediction for CodingQuarry_transcript_32512-T1
Valid prediction for snap_scaffold_21-snap.1240-T1
Valid prediction for GeneMark_model.84972_t
Valid prediction for Augustus_model.g32844.t1
Valid prediction for GeneMark_model.84932_t
Valid prediction for Augustus_model.g32825.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.84931_t
Valid prediction for GeneMark_model.84959_t
Valid prediction for GeneMark_model.84971_t
Valid prediction for GeneMark_model.84966_t
Valid prediction for GlimmerHMM_glimmerT_48985-T1
Valid prediction for snap_scaffold_21-snap.1249-T1
Valid prediction for Augustus_model.g32842.t1
Valid prediction for GeneMark_model.84951_t
Valid prediction for GeneMark_model.84965_t
Valid prediction for GeneMark_model.84956_t
Valid prediction for GeneMark_model.84962_t
Valid prediction for snap_scaffold_21-snap.1250-T1
Valid prediction for snap_scaffold_21-snap.1226-T1
Valid prediction for GlimmerHMM_glimmerT_49008-T1
Valid prediction for snap_scaffold_21-snap.1242-T1
Valid prediction for snap_scaffold_21-snap.1231-T1
Valid prediction for snap_scaffold_21-snap.1239-T1
Valid prediction for snap_scaffold_21-snap.1237-T1
Valid prediction for snap_scaffold_21-snap.1215-T1
Valid prediction for GeneMark_model.84939_t
Valid prediction for snap_scaffold_21-snap.1252-T1
Valid prediction for GeneMark_model.84941_t
Valid prediction for snap_scaffold_21-snap.1232-T1
Valid prediction for GlimmerHMM_glimmerT_49005-T1
Valid prediction for snap_scaffold_21-snap.1222-T1
Valid prediction for GeneMark_model.84968_t
Valid prediction for GeneMark_model.84944_t
Valid prediction for GeneMark_model.84953_t
Valid prediction for GlimmerHMM_glimmerT_49007-T1
Valid prediction for snap_scaffold_21-snap.1225-T1
Valid prediction for GlimmerHMM_glimmerT_48992-T1
Valid prediction for GeneMark_model.84937_t
Valid prediction for snap_scaffold_21-snap.1246-T1
Valid prediction for Augustus_model.g32840.t1
Valid prediction for snap_scaffold_21-snap.1217-T1
Valid prediction for GlimmerHMM_glimmerT_48999-T1
Valid prediction for GlimmerHMM_glimmerT_48995-T1
Valid prediction for snap_scaffold_21-snap.1221-T1
Valid prediction for GeneMark_model.84927_t
Couldn't classify 160243, 160686
Sorry, prediction pasa_asmbl_28625.p1 fails validation.
(ATG)	 CC	160243-160686	CT	ACC
Valid prediction for Augustus_model.g32841.t1
Valid prediction for snap_scaffold_21-snap.1229-T1
Valid prediction for snap_scaffold_21-snap.1224-T1
Valid prediction for GeneMark_model.84948_t
Valid prediction for Augustus_model.g32835.t1
Valid prediction for GlimmerHMM_glimmerT_48988-T1
Valid prediction for GlimmerHMM_glimmerT_48986-T1
Valid prediction for GlimmerHMM_glimmerT_48996-T1
Valid prediction for GeneMark_model.84934_t
Valid prediction for pasa_asmbl_27741.p1
Valid prediction for GeneMark_model.84935_t
Valid prediction for GeneMark_model.84926_t
Valid prediction for GeneMark_model.84967_t
Valid prediction for GeneMark_model.84946_t
Valid prediction for GeneMark_model.84958_t
Valid prediction for GlimmerHMM_glimmerT_49004-T1
Valid prediction for snap_scaffold_21-snap.1238-T1
Valid prediction for GlimmerHMM_glimmerT_48987-T1
Valid prediction for snap_scaffold_21-snap.1235-T1
Valid prediction for Augustus_model.g32843.t1
Valid prediction for snap_scaffold_21-snap.1236-T1
Valid prediction for CodingQuarry_transcript_32513-T1
Valid prediction for snap_scaffold_21-snap.1227-T1
Valid prediction for Augustus_model.g32838.t1
Valid prediction for snap_scaffold_21-snap.1218-T1
Valid prediction for Augustus_model.g32821.t1
Valid prediction for GlimmerHMM_glimmerT_48993-T1
Valid prediction for GeneMark_model.84929_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7334, rend_intergenic: 5232  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16740, rend_intergenic: 8618  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35966, rend_intergenic: 26634  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39016, rend_intergenic: 35978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55105, rend_intergenic: 39676  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72478, rend_intergenic: 65634  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73271, rend_intergenic: 72960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78068, rend_intergenic: 73533  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79565, rend_intergenic: 78173  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98965, rend_intergenic: 88583  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136328, rend_intergenic: 132393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150826, rend_intergenic: 145774  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155901, rend_intergenic: 153213  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162569, rend_intergenic: 158794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 146819, rend_intergenic: 146816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 163264
-exon list size: 693


building trellis

0.1    
0.3    
0.4    
0.6    
0.7    
0.9    
1.0    
1.2    
1.3    
1.4    
1.6    
1.7    
1.9    
2.0    
2.2    
2.3    
2.4    
2.6    
2.7    
2.9    
3.0    
3.2    
3.3    
3.5    
3.6    
3.7    
3.9    
4.0    
4.2    
4.3    
4.5    
4.6    
4.7    
4.9    
5.0    
5.2    
5.3    
5.5    
5.6    
5.8    
5.9    
6.0    
6.2    
6.3    
6.5    
6.6    
6.8    
6.9    
7.1    
7.2    
7.3    
7.5    
7.6    
7.8    
7.9    
8.1    
8.2    
8.3    
8.5    
8.6    
8.8    
8.9    
9.1    
9.2    
9.4    
9.5    
9.6    
9.8    
9.9    
10.1    
10.2    
10.4    
10.5    
10.6    
10.8    
10.9    
11.1    
11.2    
11.4    
11.5    
11.7    
11.8    
11.9    
12.1    
12.2    
12.4    
12.5    
12.7    
12.8    
12.9    
13.1    
13.2    
13.4    
13.5    
13.7    
13.8    
14.0    
14.1    
14.2    
14.4    
14.5    
14.7    
14.8    
15.0    
15.1    
15.3    
15.4    
15.5    
15.7    
15.8    
16.0    
16.1    
16.3    
16.4    
16.5    
16.7    
16.8    
17.0    
17.1    
17.3    
17.4    
17.6    
17.7    
17.8    
18.0    
18.1    
18.3    
18.4    
18.6    
18.7    
18.8    
19.0    
19.1    
19.3    
19.4    
19.6    
19.7    
19.9    
20.0    
20.1    
20.3    
20.4    
20.6    
20.7    
20.9    
21.0    
21.2    
21.3    
21.4    
21.6    
21.7    
21.9    
22.0    
22.2    
22.3    
22.4    
22.6    
22.7    
22.9    
23.0    
23.2    
23.3    
23.5    
23.6    
23.7    
23.9    
24.0    
24.2    
24.3    
24.5    
24.6    
24.7    
24.9    
25.0    
25.2    
25.3    
25.5    
25.6    
25.8    
25.9    
26.0    
26.2    
26.3    
26.5    
26.6    
26.8    
26.9    
27.1    
27.2    
27.3    
27.5    
27.6    
27.8    
27.9    
28.1    
28.2    
28.3    
28.5    
28.6    
28.8    
28.9    
29.1    
29.2    
29.4    
29.5    
29.6    
29.8    
29.9    
30.1    
30.2    
30.4    
30.5    
30.6    
30.8    
30.9    
31.1    
31.2    
31.4    
31.5    
31.7    
31.8    
31.9    
32.1    
32.2    
32.4    
32.5    
32.7    
32.8    
32.9    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
34.0    
34.1    
34.2    
34.4    
34.5    
34.7    
34.8    
35.0    
35.1    
35.3    
35.4    
35.5    
35.7    
35.8    
36.0    
36.1    
36.3    
36.4    
36.5    
36.7    
36.8    
37.0    
37.1    
37.3    
37.4    
37.6    
37.7    
37.8    
38.0    
38.1    
38.3    
38.4    
38.6    
38.7    
38.8    
39.0    
39.1    
39.3    
39.4    
39.6    
39.7    
39.9    
40.0    
40.1    
40.3    
40.4    
40.6    
40.7    
40.9    
41.0    
41.2    
41.3    
41.4    
41.6    
41.7    
41.9    
42.0    
42.2    
42.3    
42.4    
42.6    
42.7    
42.9    
43.0    
43.2    
43.3    
43.5    
43.6    
43.7    
43.9    
44.0    
44.2    
44.3    
44.5    
44.6    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.8    
45.9    
46.0    
46.2    
46.3    
46.5    
46.6    
46.8    
46.9    
47.1    
47.2    
47.3    
47.5    
47.6    
47.8    
47.9    
48.1    
48.2    
48.3    
48.5    
48.6    
48.8    
48.9    
49.1    
49.2    
49.4    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.6    
50.8    
50.9    
51.1    
51.2    
51.4    
51.5    
51.7    
51.8    
51.9    
52.1    
52.2    
52.4    
52.5    
52.7    
52.8    
52.9    
53.1    
53.2    
53.4    
53.5    
53.7    
53.8    
54.0    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.5    
55.7    
55.8    
56.0    
56.1    
56.3    
56.4    
56.5    
56.7    
56.8    
57.0    
57.1    
57.3    
57.4    
57.6    
57.7    
57.8    
58.0    
58.1    
58.3    
58.4    
58.6    
58.7    
58.8    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.9    
60.0    
60.1    
60.3    
60.4    
60.6    
60.7    
60.9    
61.0    
61.2    
61.3    
61.4    
61.6    
61.7    
61.9    
62.0    
62.2    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.2    
65.3    
65.5    
65.6    
65.8    
65.9    
66.0    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.1    
67.2    
67.3    
67.5    
67.6    
67.8    
67.9    
68.1    
68.2    
68.3    
68.5    
68.6    
68.8    
68.9    
69.1    
69.2    
69.4    
69.5    
69.6    
69.8    
69.9    
70.1    
70.2    
70.4    
70.5    
70.6    
70.8    
70.9    
71.1    
71.2    
71.4    
71.5    
71.7    
71.8    
71.9    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
74.0    
74.1    
74.2    
74.4    
74.5    
74.7    
74.8    
75.0    
75.1    
75.3    
75.4    
75.5    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.6    
77.7    
77.8    
78.0    
78.1    
78.3    
78.4    
78.6    
78.7    
78.8    
79.0    
79.1    
79.3    
79.4    
79.6    
79.7    
79.9    
80.0    
80.1    
80.3    
80.4    
80.6    
80.7    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.2    
82.3    
82.4    
82.6    
82.7    
82.9    
83.0    
83.2    
83.3    
83.5    
83.6    
83.7    
83.9    
84.0    
84.2    
84.3    
84.5    
84.6    
84.7    
84.9    
85.0    
85.2    
85.3    
85.5    
85.6    
85.8    
85.9    
86.0    
86.2    
86.3    
86.5    
86.6    
86.8    
86.9    
87.1    
87.2    
87.3    
87.5    
87.6    
87.8    
87.9    
88.1    
88.2    
88.3    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.4    
89.5    
89.6    
89.8    
89.9    
90.1    
90.2    
90.4    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.7    
91.8    
91.9    
92.1    
92.2    
92.4    
92.5    
92.7    
92.8    
92.9    
93.1    
93.2    
93.4    
93.5    
93.7    
93.8    
94.0    
94.1    
94.2    
94.4    
94.5    
94.7    
94.8    
95.0    
95.1    
95.3    
95.4    
95.5    
95.7    
95.8    
96.0    
96.1    
96.3    
96.4    
96.5    
96.7    
96.8    
97.0    
97.1    
97.3    
97.4    
97.6    
97.7    
97.8    
98.0    
98.1    
98.3    
98.4    
98.6    
98.7    
98.8    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 7334, rend_intergenic: 5232  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16740, rend_intergenic: 8618  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35966, rend_intergenic: 26634  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39016, rend_intergenic: 35978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55105, rend_intergenic: 39676  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72478, rend_intergenic: 65634  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73271, rend_intergenic: 72960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78068, rend_intergenic: 73533  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79565, rend_intergenic: 78173  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98965, rend_intergenic: 88583  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136328, rend_intergenic: 132393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150826, rend_intergenic: 145774  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155901, rend_intergenic: 153213  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162569, rend_intergenic: 158794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 146819, rend_intergenic: 146816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support