-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_21/scaffold_21_2462928-2643020

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_21-snap.445-T1
Valid prediction for snap_scaffold_21-snap.437-T1
Valid prediction for GeneMark_model.84108_t
Valid prediction for snap_scaffold_21-snap.468-T1
Couldn't classify 162500, 162681
Sorry, prediction pasa_asmbl_28435.p1 fails validation.
(ATG)	 AA	157555-157683	GT	AGG
(AAT)	 AG	160111-160190	GT	AGG
(GGA)	 AG	160906-161102	GT	AGG
(AAG)	 AG	162500-162681	GA	GGG
-recovered pasa_asmbl_28435.p1, initial, 157555, 157683
add_exon() Sorry, pasa_asmbl_28435.p1 160906-161102-terminal-2 is invalid.
-recovered pasa_asmbl_28435.p1, terminal, 160906, 161102
-recovered pasa_asmbl_28435.p1, internal, 160111, 160190
-recovered pasa_asmbl_28435.p1, internal, 160906, 161102
Valid prediction for pasa_asmbl_28422.p1
Valid prediction for GeneMark_model.84137_t
Valid prediction for snap_scaffold_21-snap.473-T1
Valid prediction for GeneMark_model.84131_t
Valid prediction for snap_scaffold_21-snap.449-T1
Valid prediction for snap_scaffold_21-snap.470-T1
Valid prediction for GeneMark_model.84124_t
Valid prediction for pasa_asmbl_28423.p1
Valid prediction for GlimmerHMM_glimmerT_48428-T1
Valid prediction for Augustus_model.g32393.t1
Valid prediction for snap_scaffold_21-snap.443-T1
Valid prediction for HiQ_model.g32398.t1
Valid prediction for GeneMark_model.84134_t
Valid prediction for snap_scaffold_21-snap.441-T1
Valid prediction for GeneMark_model.84122_t
Valid prediction for snap_scaffold_21-snap.453-T1
Valid prediction for GlimmerHMM_glimmerT_48422-T1
Valid prediction for GlimmerHMM_glimmerT_48439-T1
Valid prediction for Augustus_model.g32405.t1
Valid prediction for GeneMark_model.84106_t
Valid prediction for GlimmerHMM_glimmerT_48442-T1
Couldn't classify 28170, 28564
Couldn't classify 29549, 29676
Sorry, prediction pasa_asmbl_29017.p1 fails validation.
(AAA)	 AG	28170-28564	GT	GGG
(CCG)	 AG	29061-29389	GT	CAG
(GTA)	 AG	29549-29676	AC	GGA
-recovered pasa_asmbl_29017.p1, internal, 28170, 28564
-recovered pasa_asmbl_29017.p1, internal, 29061, 29389
Couldn't classify 163036, 163186
Sorry, prediction pasa_asmbl_28438.p1 fails validation.
(CTG)	 AC	163036-163186	GT	TGG
(GGA)	 AG	164554-164691	GT	GGG
(ATC)	 AG	165600-165767	GT	AGG
(GCA)	 AG	165927-166321	CC	GAC
-recovered pasa_asmbl_28438.p1, terminal, 165927, 166321
-recovered pasa_asmbl_28438.p1, internal, 164554, 164691
-recovered pasa_asmbl_28438.p1, internal, 165600, 165767
Valid prediction for snap_scaffold_21-snap.435-T1
Valid prediction for Augustus_model.g32382.t1
Valid prediction for GeneMark_model.84116_t
Valid prediction for GlimmerHMM_glimmerT_48424-T1
Valid prediction for GlimmerHMM_glimmerT_48418-T1
Valid prediction for GeneMark_model.84140_t
Valid prediction for Augustus_model.g32390.t1
Couldn't classify 138300, 138530
Couldn't classify 141166, 141297
Sorry, prediction pasa_asmbl_28430.p1 fails validation.
(GAC)	 AG	138300-138530	GT	AGG
(GTT)	 AG	138691-138906	GT	AGG
(GCT)	 AG	139229-139345	GT	AGG
(AAC)	 AG	139513-139659	GT	AGG
(GCC)	 AG	140331-140405	GT	AGG
(TTG)	 AG	140524-140597	GT	AGG
(TTC)	 AG	140697-140811	GT	AGG
(GAG)	 AG	141166-141297	GG	AGG
-recovered pasa_asmbl_28430.p1, internal, 138300, 138530
-recovered pasa_asmbl_28430.p1, internal, 138691, 138906
-recovered pasa_asmbl_28430.p1, internal, 139229, 139345
-recovered pasa_asmbl_28430.p1, internal, 139513, 139659
-recovered pasa_asmbl_28430.p1, internal, 140331, 140405
-recovered pasa_asmbl_28430.p1, internal, 140524, 140597
-recovered pasa_asmbl_28430.p1, internal, 140697, 140811
Valid prediction for HiQ_model.g32403.t1
Valid prediction for snap_scaffold_21-snap.456-T1
Valid prediction for Augustus_model.g32388.t1
Valid prediction for GlimmerHMM_glimmerT_48434-T1
Valid prediction for HiQ_model.g32385.t1
Valid prediction for pasa_asmbl_28413.p1
Valid prediction for GlimmerHMM_glimmerT_48445-T1
Valid prediction for GeneMark_model.84130_t
Valid prediction for GlimmerHMM_glimmerT_48431-T1
Valid prediction for GeneMark_model.84126_t
Valid prediction for Augustus_model.g32384.t1
Valid prediction for GlimmerHMM_glimmerT_48430-T1
Valid prediction for Augustus_model.g32406.t1
Valid prediction for snap_scaffold_21-snap.471-T1
Valid prediction for snap_scaffold_21-snap.442-T1
Couldn't classify 151326, 151463
Sorry, prediction pasa_asmbl_28432.p1 fails validation.
(TTT)	 TT	151326-151463	GT	AGG
(TAT)	 AG	151877-151944	GT	CGG
(GTG)	 AG	152045-152108	GT	ATG
(ATC)	 AG	152232-152308	GT	AGG
(GGG)	 AG	152393-152483	GT	GGG
(CTG)	 AG	152721-152801	GA	GAG
-recovered pasa_asmbl_28432.p1, terminal, 152721, 152801
-recovered pasa_asmbl_28432.p1, internal, 151877, 151944
-recovered pasa_asmbl_28432.p1, internal, 152045, 152108
-recovered pasa_asmbl_28432.p1, internal, 152232, 152308
-recovered pasa_asmbl_28432.p1, internal, 152393, 152483
Valid prediction for CodingQuarry_transcript_32414-T1
Valid prediction for snap_scaffold_21-snap.447-T1
Valid prediction for GlimmerHMM_glimmerT_48437-T1
Valid prediction for GeneMark_model.84114_t
Valid prediction for snap_scaffold_21-snap.444-T1
Valid prediction for GeneMark_model.84141_t
Valid prediction for GeneMark_model.84128_t
Valid prediction for Augustus_model.g32407.t1
Valid prediction for GlimmerHMM_glimmerT_48443-T1
Valid prediction for HiQ_model.g32386.t1
Valid prediction for Augustus_model.g32391.t1
Valid prediction for CodingQuarry_transcript_32407-T1
Valid prediction for snap_scaffold_21-snap.474-T1
Valid prediction for pasa_asmbl_28424.p1
Valid prediction for snap_scaffold_21-snap.469-T1
Valid prediction for GlimmerHMM_glimmerT_48429-T1
Valid prediction for CodingQuarry_transcript_32409-T1
Valid prediction for Augustus_model.g32404.t1
Valid prediction for CodingQuarry_transcript_32410-T1
Valid prediction for snap_scaffold_21-snap.454-T1
Valid prediction for GeneMark_model.84111_t
Valid prediction for GeneMark_model.84121_t
Couldn't classify 130282, 130620
Sorry, prediction pasa_asmbl_28425.p1 fails validation.
(TCG)	 AC	130282-130620	GT	AGG
(ATG)	 AG	130945-131067	GT	AGG
(GAT)	 AG	131212-131403	AG	AGA
-recovered pasa_asmbl_28425.p1, initial, 130945, 131067
-recovered pasa_asmbl_28425.p1, terminal, 131212, 131403
-recovered pasa_asmbl_28425.p1, internal, 130945, 131067
Valid prediction for HiQ_model.g32387.t1
Valid prediction for snap_scaffold_21-snap.460-T1
Valid prediction for snap_scaffold_21-snap.450-T1
Valid prediction for GlimmerHMM_glimmerT_48417-T1
Valid prediction for snap_scaffold_21-snap.440-T1
Couldn't classify 30068, 30133
Sorry, prediction pasa_asmbl_28416.p1 fails validation.
(GTG)	 CG	30068-30133	GT	AGG
(AAT)	 AG	30420-30605	GT	AGG
(TTT)	 AG	30949-31113	GT	GGG
(GTG)	 AG	31449-31701	GT	GGG
(GTA)	 AG	31924-32151	GT	GGG
(CCC)	 AG	32436-32700	GT	ACG
(CTT)	 AG	32968-33163	GT	AGG
(GAT)	 AG	33275-33475	GT	AGG
(CTG)	 AG	34069-34119	GT	AGG
(AAG)	 AG	34275-34350	GT	AGG
(GTG)	 AG	34442-34578	CC	GAC
-recovered pasa_asmbl_28416.p1, terminal, 34442, 34578
-recovered pasa_asmbl_28416.p1, internal, 30420, 30605
-recovered pasa_asmbl_28416.p1, internal, 30949, 31113
-recovered pasa_asmbl_28416.p1, internal, 31449, 31701
-recovered pasa_asmbl_28416.p1, internal, 31924, 32151
-recovered pasa_asmbl_28416.p1, internal, 32436, 32700
-recovered pasa_asmbl_28416.p1, internal, 32968, 33163
-recovered pasa_asmbl_28416.p1, internal, 33275, 33475
-recovered pasa_asmbl_28416.p1, internal, 34069, 34119
-recovered pasa_asmbl_28416.p1, internal, 34275, 34350
Couldn't classify 156398, 156682
Sorry, prediction pasa_asmbl_28434.p1 fails validation.
(GTC)	 AG	156398-156682	GT	AGG
(GGA)	 AG	156766-156861	GT	AGG
(GTT)	 AG	157026-157031	CC	GAC
-recovered pasa_asmbl_28434.p1, terminal, 157026, 157031
-recovered pasa_asmbl_28434.p1, internal, 156398, 156682
-recovered pasa_asmbl_28434.p1, internal, 156766, 156861
Valid prediction for snap_scaffold_21-snap.467-T1
Valid prediction for GeneMark_model.84120_t
Valid prediction for GlimmerHMM_glimmerT_48421-T1
Valid prediction for HiQ_model.g32381.t1
Valid prediction for GeneMark_model.84113_t
Valid prediction for snap_scaffold_21-snap.464-T1
Valid prediction for CodingQuarry_transcript_32411-T1
Valid prediction for GeneMark_model.84101_t
Valid prediction for GeneMark_model.84143_t
Valid prediction for GlimmerHMM_glimmerT_48426-T1
Valid prediction for snap_scaffold_21-snap.462-T1
Valid prediction for GlimmerHMM_glimmerT_48423-T1
Valid prediction for snap_scaffold_21-snap.466-T1
Valid prediction for Augustus_model.g32400.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_48415-T1
Valid prediction for GlimmerHMM_glimmerT_48420-T1
Valid prediction for snap_scaffold_21-snap.463-T1
Valid prediction for GeneMark_model.84135_t
Valid prediction for Augustus_model.g32397.t1
Valid prediction for snap_scaffold_21-snap.459-T1
Valid prediction for snap_scaffold_21-snap.451-T1
Valid prediction for Augustus_model.g32379.t1
Valid prediction for snap_scaffold_21-snap.430-T1
Valid prediction for Augustus_model.g32402.t1
Valid prediction for CodingQuarry_transcript_32403-T1
Valid prediction for Augustus_model.g32383.t1
Valid prediction for snap_scaffold_21-snap.433-T1
Valid prediction for GlimmerHMM_glimmerT_48416-T1
Valid prediction for HiQ_model.g32378.t1
Valid prediction for GlimmerHMM_glimmerT_48440-T1
Valid prediction for GeneMark_model.84118_t
Valid prediction for snap_scaffold_21-snap.455-T1
Valid prediction for GeneMark_model.84139_t
Valid prediction for CodingQuarry_transcript_32408-T1
Valid prediction for CodingQuarry_transcript_32404-T1
Valid prediction for snap_scaffold_21-snap.457-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for pasa_asmbl_27485.p1
Valid prediction for HiQ_model.g32395.t1
Valid prediction for snap_scaffold_21-snap.446-T1
Valid prediction for GeneMark_model.84138_t
Valid prediction for Augustus_model.g32392.t1
Valid prediction for GeneMark_model.84117_t
Valid prediction for GlimmerHMM_glimmerT_48438-T1
Valid prediction for Augustus_model.g32389.t1
Valid prediction for GeneMark_model.84132_t
Valid prediction for GlimmerHMM_glimmerT_48444-T1
Couldn't classify 114126, 114318
Sorry, prediction pasa_asmbl_27502.p2 fails validation.
(AAA)	 CC	114126-114318	GT	AGG
(AAA)	 AG	114433-114545	CA	GAC
-recovered pasa_asmbl_27502.p2, terminal, 114433, 114545
Valid prediction for GeneMark_model.84110_t
Valid prediction for snap_scaffold_21-snap.439-T1
Valid prediction for GlimmerHMM_glimmerT_48425-T1
Valid prediction for GeneMark_model.84136_t
Valid prediction for Augustus_model.g32399.t1
Valid prediction for snap_scaffold_21-snap.452-T1
Valid prediction for GeneMark_model.84127_t
Valid prediction for GlimmerHMM_glimmerT_48436-T1
Valid prediction for Augustus_model.g32401.t1
Valid prediction for GeneMark_model.84125_t
Couldn't classify 62488, 62562
Couldn't classify 64586, 64633
Sorry, prediction pasa_asmbl_27505.p1 fails validation.
(GTC)	 CT	62488-62562	GT	AGG
(GCC)	 AG	62763-62846	GT	TGG
(GTT)	 AG	63388-63441	GT	AGG
(AGA)	 AG	63698-63748	GT	AGG
(GAG)	 AG	63948-64052	GT	ATG
(ACG)	 AG	64184-64237	GT	AGG
(AGG)	 AG	64334-64405	GT	AGG
(ACC)	 AG	64586-64633	TT	AGT
-recovered pasa_asmbl_27505.p1, internal, 62763, 62846
-recovered pasa_asmbl_27505.p1, internal, 63388, 63441
-recovered pasa_asmbl_27505.p1, internal, 63698, 63748
-recovered pasa_asmbl_27505.p1, internal, 63948, 64052
-recovered pasa_asmbl_27505.p1, internal, 64184, 64237
-recovered pasa_asmbl_27505.p1, internal, 64334, 64405
Valid prediction for GeneMark_model.84102_t
Valid prediction for Augustus_model.g32380.t1
Valid prediction for snap_scaffold_21-snap.434-T1
Couldn't classify 115324, 115466
Sorry, prediction pasa_asmbl_27498.p1 fails validation.
(TTC)	 TA	115324-115466	GT	GGG
(AAT)	 AG	115789-115882	GT	TGG
(GTT)	 AG	116011-116095	GT	AGG
(TTG)	 AG	116186-116377	GT	AGG
(ACT)	 AG	116679-116935	GT	AGG
(ACT)	 AG	117070-117178	GT	AGG
(ATC)	 AG	117372-117510	GT	GGG
(GCT)	 AG	117619-117809	GT	AGG
(AGA)	 AG	117901-117982	GT	AGG
(GTC)	 AG	118142-118235	AA	AGA
add_exon() Sorry, pasa_asmbl_27498.p1 117901-117982-terminal-3 is invalid.
-recovered pasa_asmbl_27498.p1, terminal, 117901, 117982
-recovered pasa_asmbl_27498.p1, terminal, 118142, 118235
-recovered pasa_asmbl_27498.p1, internal, 115789, 115882
-recovered pasa_asmbl_27498.p1, internal, 116011, 116095
-recovered pasa_asmbl_27498.p1, internal, 116186, 116377
-recovered pasa_asmbl_27498.p1, internal, 116679, 116935
-recovered pasa_asmbl_27498.p1, internal, 117070, 117178
-recovered pasa_asmbl_27498.p1, internal, 117372, 117510
-recovered pasa_asmbl_27498.p1, internal, 117619, 117809
-recovered pasa_asmbl_27498.p1, internal, 117901, 117982
Valid prediction for GeneMark_model.84115_t
Valid prediction for GeneMark_model.84142_t
Valid prediction for GlimmerHMM_glimmerT_48413-T1
Valid prediction for GeneMark_model.84112_t
Valid prediction for GeneMark_model.84119_t
Valid prediction for CodingQuarry_transcript_32412-T1
Valid prediction for Augustus_model.g32396.t1
Valid prediction for GlimmerHMM_glimmerT_48412-T1
Valid prediction for GlimmerHMM_glimmerT_48419-T1
Valid prediction for snap_scaffold_21-snap.436-T1
Valid prediction for GlimmerHMM_glimmerT_48435-T1
Valid prediction for GlimmerHMM_glimmerT_48441-T1
Valid prediction for snap_scaffold_21-snap.438-T1
Sorry, intron length (3) is less than minimum required (10)
Couldn't classify 163664, 163808
Sorry, prediction pasa_asmbl_27489.p1 fails validation.
(CAG)	 AC	163664-163808	GT	AGG
(GTC)	 AG	164773-164874	GT	AGG
(CCC)	 AG	165438-165556	GT	AGG
(GAT)	 AG	165732-165838	GT	GGG
(GAT)	 AG	165993-166093	GT	AGG
(GTG)	 AG	166175-166359	AC	AGA
add_exon() Sorry, pasa_asmbl_27489.p1 164773-164874-terminal-1 is invalid.
-recovered pasa_asmbl_27489.p1, terminal, 164773, 164874
-recovered pasa_asmbl_27489.p1, terminal, 166175, 166359
-recovered pasa_asmbl_27489.p1, internal, 164773, 164874
-recovered pasa_asmbl_27489.p1, internal, 165438, 165556
-recovered pasa_asmbl_27489.p1, internal, 165732, 165838
-recovered pasa_asmbl_27489.p1, internal, 165993, 166093
Valid prediction for snap_scaffold_21-snap.448-T1
Valid prediction for snap_scaffold_21-snap.465-T1
Valid prediction for GlimmerHMM_glimmerT_48433-T1
Valid prediction for pasa_asmbl_27503.p1
Valid prediction for GeneMark_model.84107_t
Valid prediction for snap_scaffold_21-snap.458-T1
Couldn't classify 142678, 142927
Sorry, prediction pasa_asmbl_27497.p1 fails validation.
(TCC)	 CC	142678-142927	GT	GGG
(ACT)	 AG	143142-143301	GT	ATG
(TGT)	 AG	143402-143458	GT	AGG
(GGA)	 AG	143835-143914	GT	CGG
(TCT)	 AG	144393-144481	CA	AAC
-recovered pasa_asmbl_27497.p1, terminal, 144393, 144481
-recovered pasa_asmbl_27497.p1, internal, 143142, 143301
-recovered pasa_asmbl_27497.p1, internal, 143402, 143458
-recovered pasa_asmbl_27497.p1, internal, 143835, 143914
Valid prediction for snap_scaffold_21-snap.461-T1
Valid prediction for snap_scaffold_21-snap.472-T1
Valid prediction for GlimmerHMM_glimmerT_48414-T1
Valid prediction for snap_scaffold_21-snap.432-T1
Valid prediction for Augustus_model.g32394.t1
Valid prediction for CodingQuarry_transcript_32405-T1
Valid prediction for GeneMark_model.84104_t
Valid prediction for snap_scaffold_21-snap.431-T1
Valid prediction for GeneMark_model.84133_t
Valid prediction for GeneMark_model.84129_t
Valid prediction for GeneMark_model.84105_t
Valid prediction for GlimmerHMM_glimmerT_48432-T1
Valid prediction for GlimmerHMM_glimmerT_48427-T1
Valid prediction for CodingQuarry_transcript_32406-T1
Valid prediction for GeneMark_model.84109_t
Couldn't classify 158405, 158456
Sorry, prediction pasa_asmbl_27493.p1 fails validation.
(CTG)	 AA	158405-158456	GT	AGG
(ACA)	 AG	159845-160002	GT	GGG
(ATG)	 AG	160206-160378	GT	AGG
(TGT)	 AG	160512-160578	GT	ACG
(GAT)	 AG	161020-161163	AC	AAA
-recovered pasa_asmbl_27493.p1, initial, 160206, 160378
-recovered pasa_asmbl_27493.p1, terminal, 161020, 161163
-recovered pasa_asmbl_27493.p1, internal, 159845, 160002
-recovered pasa_asmbl_27493.p1, internal, 160206, 160378
-recovered pasa_asmbl_27493.p1, internal, 160512, 160578
Valid prediction for GeneMark_model.84103_t
Valid prediction for GeneMark_model.84123_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 26088, rend_intergenic: 23780  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28559, rend_intergenic: 26185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34809, rend_intergenic: 29136  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47482, rend_intergenic: 37177  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77577, rend_intergenic: 70119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99721, rend_intergenic: 91841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104460, rend_intergenic: 100449  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119997, rend_intergenic: 113359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130393, rend_intergenic: 129600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141575, rend_intergenic: 136794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147743, rend_intergenic: 142412  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 180093
-exon list size: 753


building trellis

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13.6    
13.8    
13.9    
14.0    
14.2    
14.3    
14.4    
14.6    
14.7    
14.8    
15.0    
15.1    
15.2    
15.4    
15.5    
15.6    
15.8    
15.9    
16.0    
16.2    
16.3    
16.4    
16.6    
16.7    
16.8    
17.0    
17.1    
17.2    
17.4    
17.5    
17.6    
17.7    
17.9    
18.0    
18.1    
18.3    
18.4    
18.5    
18.7    
18.8    
18.9    
19.1    
19.2    
19.3    
19.5    
19.6    
19.7    
19.9    
20.0    
20.1    
20.3    
20.4    
20.5    
20.7    
20.8    
20.9    
21.1    
21.2    
21.3    
21.5    
21.6    
21.7    
21.9    
22.0    
22.1    
22.3    
22.4    
22.5    
22.6    
22.8    
22.9    
23.0    
23.2    
23.3    
23.4    
23.6    
23.7    
23.8    
24.0    
24.1    
24.2    
24.4    
24.5    
24.6    
24.8    
24.9    
25.0    
25.2    
25.3    
25.4    
25.6    
25.7    
25.8    
26.0    
26.1    
26.2    
26.4    
26.5    
26.6    
26.8    
26.9    
27.0    
27.2    
27.3    
27.4    
27.5    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.5    
28.6    
28.7    
28.9    
29.0    
29.1    
29.3    
29.4    
29.5    
29.7    
29.8    
29.9    
30.1    
30.2    
30.3    
30.5    
30.6    
30.7    
30.9    
31.0    
31.1    
31.3    
31.4    
31.5    
31.7    
31.8    
31.9    
32.1    
32.2    
32.3    
32.5    
32.6    
32.7    
32.8    
33.0    
33.1    
33.2    
33.4    
33.5    
33.6    
33.8    
33.9    
34.0    
34.2    
34.3    
34.4    
34.6    
34.7    
34.8    
35.0    
35.1    
35.2    
35.4    
35.5    
35.6    
35.8    
35.9    
36.0    
36.2    
36.3    
36.4    
36.6    
36.7    
36.8    
37.0    
37.1    
37.2    
37.4    
37.5    
37.6    
37.7    
37.9    
38.0    
38.1    
38.3    
38.4    
38.5    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.9    
40.0    
40.1    
40.3    
40.4    
40.5    
40.7    
40.8    
40.9    
41.1    
41.2    
41.3    
41.5    
41.6    
41.7    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.6    
42.8    
42.9    
43.0    
43.2    
43.3    
43.4    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.2    
45.3    
45.4    
45.6    
45.7    
45.8    
46.0    
46.1    
46.2    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.5    
48.6    
48.7    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.3    
51.4    
51.5    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.8    
53.9    
54.0    
54.2    
54.3    
54.4    
54.6    
54.7    
54.8    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.1    
59.2    
59.3    
59.5    
59.6    
59.7    
59.9    
60.0    
60.1    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.5    
61.6    
61.7    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.5    
67.7    
67.8    
67.9    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.5    
72.6    
72.7    
72.8    
73.0    
73.1    
73.2    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.4    
75.5    
75.6    
75.8    
75.9    
76.0    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.9    
80.0    
80.1    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.4    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 36 predictions from path traversal
Error with prediction: snap lend_intergenic: 26088, rend_intergenic: 23780  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28559, rend_intergenic: 26185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34809, rend_intergenic: 29136  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47482, rend_intergenic: 37177  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77577, rend_intergenic: 70119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99721, rend_intergenic: 91841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104460, rend_intergenic: 100449  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119997, rend_intergenic: 113359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130393, rend_intergenic: 129600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141575, rend_intergenic: 136794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147743, rend_intergenic: 142412  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 31 predictions persist after filtering for low support