-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_21/scaffold_21_178254-453204

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_48147-T1
Valid prediction for snap_scaffold_21-snap.54-T1
Couldn't classify 268903, 268951
Couldn't classify 270700, 270730
Sorry, prediction pasa_asmbl_28282.p1 fails validation.
(AAA)	 AG	268903-268951	GT	GGG
(GTT)	 AG	269505-269594	GT	AGG
(TGA)	 AG	269907-270104	GT	GGG
(AGG)	 AG	270376-270571	GT	AGG
(GGG)	 AG	270700-270730	AT	ACA
-recovered pasa_asmbl_28282.p1, internal, 268903, 268951
-recovered pasa_asmbl_28282.p1, internal, 269505, 269594
-recovered pasa_asmbl_28282.p1, internal, 269907, 270104
-recovered pasa_asmbl_28282.p1, internal, 270376, 270571
Valid prediction for GlimmerHMM_glimmerT_48159-T1
Valid prediction for GlimmerHMM_glimmerT_48153-T1
Valid prediction for GeneMark_model.83729_t
Valid prediction for Augustus_model.g32181.t1
Couldn't classify 46869, 46993
Sorry, prediction pasa_asmbl_28271.p1 fails validation.
(GTG)	 AA	46869-46993	GT	GGG
(GAT)	 AG	47283-47393	GT	AGG
(GTT)	 AG	47992-48074	GT	TGG
(ATG)	 AG	49003-49097	GT	TAG
(GTT)	 AG	49199-49264	AG	AAA
-recovered pasa_asmbl_28271.p1, initial, 49003, 49097
-recovered pasa_asmbl_28271.p1, terminal, 49199, 49264
-recovered pasa_asmbl_28271.p1, internal, 47283, 47393
-recovered pasa_asmbl_28271.p1, internal, 47992, 48074
-recovered pasa_asmbl_28271.p1, internal, 49003, 49097
Valid prediction for snap_scaffold_21-snap.68-T1
Valid prediction for GlimmerHMM_glimmerT_48166-T1
Valid prediction for snap_scaffold_21-snap.49-T1
Valid prediction for snap_scaffold_21-snap.40-T1
Couldn't classify 261104, 261169
Couldn't classify 262094, 262951
Sorry, prediction pasa_asmbl_28279.p1 fails validation.
(TCT)	 CC	261104-261169	GT	AGG
(GTC)	 AG	261705-261782	GT	AGG
(ATG)	 AG	262094-262951	AC	GTA
-recovered pasa_asmbl_28279.p1, internal, 261705, 261782
Valid prediction for CodingQuarry_transcript_32356-T1
Valid prediction for GeneMark_model.83751_t
Valid prediction for GlimmerHMM_glimmerT_48146-T1
Valid prediction for snap_scaffold_21-snap.56-T1
Valid prediction for snap_scaffold_21-snap.70-T1
Couldn't classify 93348, 93548
Sorry, prediction pasa_asmbl_28276.p1 fails validation.
(AAC)	 AT	93348-93548	GT	AGG
(GTG)	 AG	93625-93791	GT	ACG
(CCC)	 AG	93880-93978	GT	AGG
(ATT)	 AG	94058-94124	GT	AAG
(CAA)	 AG	94219-94281	GT	AGG
(CCT)	 AG	94485-94555	GT	AGG
(CTC)	 AG	94691-94796	GT	AGG
(GAT)	 AG	94886-94916	GT	AGG
(GAG)	 AG	94996-95094	GT	GAG
(AAG)	 AG	95269-95401	GT	AGG
(GCA)	 AG	95613-95703	AT	GAA
-recovered pasa_asmbl_28276.p1, terminal, 95613, 95703
-recovered pasa_asmbl_28276.p1, internal, 93625, 93791
-recovered pasa_asmbl_28276.p1, internal, 93880, 93978
-recovered pasa_asmbl_28276.p1, internal, 94058, 94124
-recovered pasa_asmbl_28276.p1, internal, 94219, 94281
-recovered pasa_asmbl_28276.p1, internal, 94485, 94555
-recovered pasa_asmbl_28276.p1, internal, 94691, 94796
-recovered pasa_asmbl_28276.p1, internal, 94886, 94916
-recovered pasa_asmbl_28276.p1, internal, 94996, 95094
-recovered pasa_asmbl_28276.p1, internal, 95269, 95401
Valid prediction for GeneMark_model.83757_t
Valid prediction for HiQ_model.g32178.t1
Valid prediction for snap_scaffold_21-snap.69-T1
Valid prediction for Augustus_model.g32180.t1
Valid prediction for GlimmerHMM_glimmerT_48148-T1
Valid prediction for Augustus_model.g32201.t1
Valid prediction for Augustus_model.g32175.t1
Valid prediction for snap_scaffold_21-snap.55-T1
Valid prediction for snap_scaffold_21-snap.73-T1
Couldn't classify 258825, 259088
Couldn't classify 259603, 259764
Sorry, prediction pasa_asmbl_28278.p1 fails validation.
(GAG)	 AG	258825-259088	GT	AGG
(TAC)	 AG	259603-259764	CC	TAC
-recovered pasa_asmbl_28278.p1, internal, 258825, 259088
Valid prediction for snap_scaffold_21-snap.71-T1
Valid prediction for GeneMark_model.83733_t
Valid prediction for GlimmerHMM_glimmerT_48163-T1
Valid prediction for Augustus_model.g32189.t1
Valid prediction for GlimmerHMM_glimmerT_48160-T1
Valid prediction for snap_scaffold_21-snap.46-T1
Valid prediction for GlimmerHMM_glimmerT_48161-T1
Valid prediction for snap_scaffold_21-snap.57-T1
Valid prediction for snap_scaffold_21-snap.44-T1
Valid prediction for GeneMark_model.83731_t
Valid prediction for GlimmerHMM_glimmerT_48143-T1
Couldn't classify 263888, 264904
Sorry, prediction pasa_asmbl_28281.p1 fails validation.
(ATG)	 GC	263888-264904	TG	GGT
Valid prediction for snap_scaffold_21-snap.72-T1
Valid prediction for GeneMark_model.83734_t
Valid prediction for Augustus_model.g32204.t1
Valid prediction for Augustus_model.g32198.t1
Valid prediction for GlimmerHMM_glimmerT_48141-T1
Valid prediction for GeneMark_model.83742_t
Valid prediction for snap_scaffold_21-snap.48-T1
Valid prediction for CodingQuarry_transcript_32351-T1
Valid prediction for snap_scaffold_21-snap.43-T1
Valid prediction for HiQ_model.g32185.t1
Valid prediction for snap_scaffold_21-snap.75-T1
Valid prediction for CodingQuarry_transcript_32354-T1
Valid prediction for CodingQuarry_transcript_32355-T1
Valid prediction for snap_scaffold_21-snap.47-T1
Valid prediction for Augustus_model.g32202.t1
Valid prediction for GeneMark_model.83745_t
Valid prediction for HiQ_model.g32183.t1
Valid prediction for GlimmerHMM_glimmerT_48154-T1
Valid prediction for GlimmerHMM_glimmerT_48167-T1
Valid prediction for GlimmerHMM_glimmerT_48145-T1
Valid prediction for GeneMark_model.83754_t
Valid prediction for Augustus_model.g32184.t1
Valid prediction for snap_scaffold_21-snap.74-T1
Valid prediction for Augustus_model.g32199.t1
Valid prediction for GlimmerHMM_glimmerT_48150-T1
Valid prediction for pasa_asmbl_28274.p1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.83740_t
Valid prediction for Augustus_model.g32194.t1
Valid prediction for snap_scaffold_21-snap.67-T1
Valid prediction for snap_scaffold_21-snap.37-T1
Valid prediction for GeneMark_model.83739_t
Valid prediction for Augustus_model.g32177.t1
Valid prediction for GlimmerHMM_glimmerT_48144-T1
Valid prediction for Augustus_model.g32193.t1
Valid prediction for GeneMark_model.83753_t
Valid prediction for Augustus_model.g32187.t1
Valid prediction for snap_scaffold_21-snap.51-T1
Valid prediction for snap_scaffold_21-snap.64-T1
Valid prediction for Augustus_model.g32191.t1
Valid prediction for GeneMark_model.83730_t
Valid prediction for GeneMark_model.83748_t
Valid prediction for snap_scaffold_21-snap.59-T1
Valid prediction for HiQ_model.g32196.t1
Valid prediction for Augustus_model.g32200.t1
Valid prediction for snap_scaffold_21-snap.38-T1
Valid prediction for GlimmerHMM_glimmerT_48164-T1
Valid prediction for CodingQuarry_transcript_32358-T1
Valid prediction for CodingQuarry_transcript_32359-T1
Valid prediction for pasa_asmbl_27341.p1
Valid prediction for GlimmerHMM_glimmerT_48156-T1
Valid prediction for CodingQuarry_transcript_32360-T1
Valid prediction for CodingQuarry_transcript_32352-T1
Valid prediction for GeneMark_model.83746_t
Valid prediction for snap_scaffold_21-snap.62-T1
Valid prediction for GlimmerHMM_glimmerT_48155-T1
Valid prediction for snap_scaffold_21-snap.50-T1
Valid prediction for GeneMark_model.83737_t
Valid prediction for snap_scaffold_21-snap.41-T1
Valid prediction for Augustus_model.g32186.t1
Valid prediction for GeneMark_model.83741_t
Valid prediction for snap_scaffold_21-snap.53-T1
Valid prediction for GeneMark_model.83750_t
Valid prediction for GeneMark_model.83744_t
Valid prediction for GeneMark_model.83738_t
Valid prediction for GlimmerHMM_glimmerT_48157-T1
Valid prediction for GlimmerHMM_glimmerT_48165-T1
Valid prediction for GeneMark_model.83743_t
Couldn't classify 36449, 36542
Couldn't classify 40285, 40353
Sorry, prediction pasa_asmbl_27348.p1 fails validation.
(CCC)	 GA	36449-36542	GT	AGG
(GAG)	 AG	38344-38685	GT	TGG
(AGC)	 AG	38808-39089	GT	CAG
(GAA)	 AG	39378-39471	GT	AAG
(GCC)	 AG	39774-39847	GT	AGG
(TTG)	 AG	39962-40029	GT	AAG
(GAT)	 AG	40285-40353	AG	CTA
-recovered pasa_asmbl_27348.p1, internal, 38344, 38685
-recovered pasa_asmbl_27348.p1, internal, 38808, 39089
-recovered pasa_asmbl_27348.p1, internal, 39378, 39471
-recovered pasa_asmbl_27348.p1, internal, 39774, 39847
-recovered pasa_asmbl_27348.p1, internal, 39962, 40029
Couldn't classify 124597, 124713
Sorry, prediction pasa_asmbl_27326.p1 fails validation.
(ATT)	 TG	124597-124713	GT	TGG
(TCC)	 AG	124915-124998	GT	AGG
(ATT)	 AG	125170-125280	GT	TGG
(CTG)	 AG	125545-125643	GT	CGG
(AAT)	 AG	126387-126429	GT	GGG
(AGC)	 AG	126559-126664	GT	AGG
(GCA)	 AG	126861-126998	GT	CTG
(CCT)	 AG	127675-127707	GT	TGG
(CAC)	 AG	128730-128844	GT	AGG
(AAG)	 AG	129133-129238	GT	TAG
(TTG)	 AG	130278-130496	GT	GGG
(GCC)	 AG	131090-131240	GT	AGG
(AGC)	 AG	131927-131962	GT	AGG
(GAT)	 AG	132141-132307	GT	TGG
(AAC)	 AG	132396-132542	GT	TGG
(TGT)	 AG	132700-132785	GT	GGG
(TTC)	 AG	132873-132998	GT	AGG
(GAA)	 AG	133380-133494	GT	AGG
(ATG)	 AG	133681-133781	GT	AGG
(AGG)	 AG	134119-134196	GT	AGG
(AAT)	 AG	134414-134489	GT	CGG
(AAC)	 AG	135695-135862	GT	TGG
(ATA)	 AG	136821-136908	GT	ACG
(GTG)	 AG	136997-137074	GT	GAG
(TGC)	 AG	137175-137269	GT	AGG
(AAA)	 AG	137429-137707	GT	CTG
(TGG)	 AG	137895-138200	GT	CGG
(GTA)	 AG	138394-138623	GT	AGG
(GAC)	 AG	139011-139083	GT	AGG
(ATC)	 AG	139537-139547	TG	AGT
add_exon() Sorry, pasa_asmbl_27326.p1 133681-133781-initial-1 is invalid.
-recovered pasa_asmbl_27326.p1, initial, 133681, 133781
add_exon() Sorry, pasa_asmbl_27326.p1 131090-131240-terminal-3 is invalid.
-recovered pasa_asmbl_27326.p1, terminal, 131090, 131240
-recovered pasa_asmbl_27326.p1, terminal, 139537, 139547
-recovered pasa_asmbl_27326.p1, internal, 124915, 124998
-recovered pasa_asmbl_27326.p1, internal, 125170, 125280
-recovered pasa_asmbl_27326.p1, internal, 125545, 125643
-recovered pasa_asmbl_27326.p1, internal, 126387, 126429
-recovered pasa_asmbl_27326.p1, internal, 126559, 126664
-recovered pasa_asmbl_27326.p1, internal, 126861, 126998
-recovered pasa_asmbl_27326.p1, internal, 127675, 127707
-recovered pasa_asmbl_27326.p1, internal, 128730, 128844
-recovered pasa_asmbl_27326.p1, internal, 129133, 129238
-recovered pasa_asmbl_27326.p1, internal, 130278, 130496
-recovered pasa_asmbl_27326.p1, internal, 131090, 131240
-recovered pasa_asmbl_27326.p1, internal, 131927, 131962
-recovered pasa_asmbl_27326.p1, internal, 132141, 132307
-recovered pasa_asmbl_27326.p1, internal, 132396, 132542
-recovered pasa_asmbl_27326.p1, internal, 132700, 132785
-recovered pasa_asmbl_27326.p1, internal, 132873, 132998
-recovered pasa_asmbl_27326.p1, internal, 133380, 133494
-recovered pasa_asmbl_27326.p1, internal, 133681, 133781
-recovered pasa_asmbl_27326.p1, internal, 134119, 134196
-recovered pasa_asmbl_27326.p1, internal, 134414, 134489
-recovered pasa_asmbl_27326.p1, internal, 135695, 135862
-recovered pasa_asmbl_27326.p1, internal, 136821, 136908
-recovered pasa_asmbl_27326.p1, internal, 136997, 137074
-recovered pasa_asmbl_27326.p1, internal, 137175, 137269
-recovered pasa_asmbl_27326.p1, internal, 137429, 137707
-recovered pasa_asmbl_27326.p1, internal, 137895, 138200
-recovered pasa_asmbl_27326.p1, internal, 138394, 138623
-recovered pasa_asmbl_27326.p1, internal, 139011, 139083
Valid prediction for GeneMark_model.83747_t
Valid prediction for snap_scaffold_21-snap.63-T1
Valid prediction for GlimmerHMM_glimmerT_48158-T1
Valid prediction for CodingQuarry_transcript_32357-T1
Valid prediction for HiQ_model.g32179.t1
Valid prediction for snap_scaffold_21-snap.52-T1
Valid prediction for snap_scaffold_21-snap.45-T1
Valid prediction for Augustus_model.g32197.t1
Valid prediction for GlimmerHMM_glimmerT_48162-T1
Valid prediction for pasa_asmbl_27335.p1
Valid prediction for Augustus_model.g32188.t1
Valid prediction for snap_scaffold_21-snap.61-T1
Valid prediction for GeneMark_model.83749_t
Valid prediction for GlimmerHMM_glimmerT_48152-T1
Valid prediction for Augustus_model.g32182.t1
Valid prediction for snap_scaffold_21-snap.39-T1
Valid prediction for GlimmerHMM_glimmerT_48139-T1
Valid prediction for GlimmerHMM_glimmerT_48142-T1
Valid prediction for GeneMark_model.83727_t
Valid prediction for CodingQuarry_transcript_32361-T1
Valid prediction for snap_scaffold_21-snap.65-T1
Valid prediction for snap_scaffold_21-snap.60-T1
Valid prediction for snap_scaffold_21-snap.58-T1
Valid prediction for GlimmerHMM_glimmerT_48149-T1
Valid prediction for snap_scaffold_21-snap.42-T1
Valid prediction for pasa_asmbl_27308.p1
Valid prediction for GlimmerHMM_glimmerT_48140-T1
Valid prediction for GeneMark_model.83756_t
Valid prediction for GeneMark_model.83728_t
Valid prediction for Augustus_model.g32174.t1
Valid prediction for HiQ_model.g32195.t1
Valid prediction for GlimmerHMM_glimmerT_48151-T1
Valid prediction for Augustus_model.g32203.t1
Valid prediction for snap_scaffold_21-snap.66-T1
Valid prediction for Augustus_model.g32190.t1
Valid prediction for Augustus_model.g32192.t1
Valid prediction for GeneMark_model.83732_t
Valid prediction for Augustus_model.g32176.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 157919, rend_intergenic: 149593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 274951
-exon list size: 576


building trellis

0.2    
0.3    
0.5    
0.7    
0.9    
1.0    
1.2    
1.4    
1.6    
1.7    
1.9    
2.1    
2.2    
2.4    
2.6    
2.8    
2.9    
3.1    
3.3    
3.5    
3.6    
3.8    
4.0    
4.2    
4.3    
4.5    
4.7    
4.8    
5.0    
5.2    
5.4    
5.5    
5.7    
5.9    
6.1    
6.2    
6.4    
6.6    
6.7    
6.9    
7.1    
7.3    
7.4    
7.6    
7.8    
8.0    
8.1    
8.3    
8.5    
8.7    
8.8    
9.0    
9.2    
9.3    
9.5    
9.7    
9.9    
10.0    
10.2    
10.4    
10.6    
10.7    
10.9    
11.1    
11.2    
11.4    
11.6    
11.8    
11.9    
12.1    
12.3    
12.5    
12.6    
12.8    
13.0    
13.1    
13.3    
13.5    
13.7    
13.8    
14.0    
14.2    
14.4    
14.5    
14.7    
14.9    
15.1    
15.2    
15.4    
15.6    
15.7    
15.9    
16.1    
16.3    
16.4    
16.6    
16.8    
17.0    
17.1    
17.3    
17.5    
17.6    
17.8    
18.0    
18.2    
18.3    
18.5    
18.7    
18.9    
19.0    
19.2    
19.4    
19.6    
19.7    
19.9    
20.1    
20.2    
20.4    
20.6    
20.8    
20.9    
21.1    
21.3    
21.5    
21.6    
21.8    
22.0    
22.1    
22.3    
22.5    
22.7    
22.8    
23.0    
23.2    
23.4    
23.5    
23.7    
23.9    
24.0    
24.2    
24.4    
24.6    
24.7    
24.9    
25.1    
25.3    
25.4    
25.6    
25.8    
26.0    
26.1    
26.3    
26.5    
26.6    
26.8    
27.0    
27.2    
27.3    
27.5    
27.7    
27.9    
28.0    
28.2    
28.4    
28.5    
28.7    
28.9    
29.1    
29.2    
29.4    
29.6    
29.8    
29.9    
30.1    
30.3    
30.4    
30.6    
30.8    
31.0    
31.1    
31.3    
31.5    
31.7    
31.8    
32.0    
32.2    
32.4    
32.5    
32.7    
32.9    
33.0    
33.2    
33.4    
33.6    
33.7    
33.9    
34.1    
34.3    
34.4    
34.6    
34.8    
34.9    
35.1    
35.3    
35.5    
35.6    
35.8    
36.0    
36.2    
36.3    
36.5    
36.7    
36.9    
37.0    
37.2    
37.4    
37.5    
37.7    
37.9    
38.1    
38.2    
38.4    
38.6    
38.8    
38.9    
39.1    
39.3    
39.4    
39.6    
39.8    
40.0    
40.1    
40.3    
40.5    
40.7    
40.8    
41.0    
41.2    
41.3    
41.5    
41.7    
41.9    
42.0    
42.2    
42.4    
42.6    
42.7    
42.9    
43.1    
43.3    
43.4    
43.6    
43.8    
43.9    
44.1    
44.3    
44.5    
44.6    
44.8    
45.0    
45.2    
45.3    
45.5    
45.7    
45.8    
46.0    
46.2    
46.4    
46.5    
46.7    
46.9    
47.1    
47.2    
47.4    
47.6    
47.8    
47.9    
48.1    
48.3    
48.4    
48.6    
48.8    
49.0    
49.1    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.9    
51.0    
51.2    
51.4    
51.6    
51.7    
51.9    
52.1    
52.2    
52.4    
52.6    
52.8    
52.9    
53.1    
53.3    
53.5    
53.6    
53.8    
54.0    
54.2    
54.3    
54.5    
54.7    
54.8    
55.0    
55.2    
55.4    
55.5    
55.7    
55.9    
56.1    
56.2    
56.4    
56.6    
56.7    
56.9    
57.1    
57.3    
57.4    
57.6    
57.8    
58.0    
58.1    
58.3    
58.5    
58.7    
58.8    
59.0    
59.2    
59.3    
59.5    
59.7    
59.9    
60.0    
60.2    
60.4    
60.6    
60.7    
60.9    
61.1    
61.2    
61.4    
61.6    
61.8    
61.9    
62.1    
62.3    
62.5    
62.6    
62.8    
63.0    
63.1    
63.3    
63.5    
63.7    
63.8    
64.0    
64.2    
64.4    
64.5    
64.7    
64.9    
65.1    
65.2    
65.4    
65.6    
65.7    
65.9    
66.1    
66.3    
66.4    
66.6    
66.8    
67.0    
67.1    
67.3    
67.5    
67.6    
67.8    
68.0    
68.2    
68.3    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.6    
69.7    
69.9    
70.1    
70.2    
70.4    
70.6    
70.8    
70.9    
71.1    
71.3    
71.5    
71.6    
71.8    
72.0    
72.1    
72.3    
72.5    
72.7    
72.8    
73.0    
73.2    
73.4    
73.5    
73.7    
73.9    
74.0    
74.2    
74.4    
74.6    
74.7    
74.9    
75.1    
75.3    
75.4    
75.6    
75.8    
76.0    
76.1    
76.3    
76.5    
76.6    
76.8    
77.0    
77.2    
77.3    
77.5    
77.7    
77.9    
78.0    
78.2    
78.4    
78.5    
78.7    
78.9    
79.1    
79.2    
79.4    
79.6    
79.8    
79.9    
80.1    
80.3    
80.4    
80.6    
80.8    
81.0    
81.1    
81.3    
81.5    
81.7    
81.8    
82.0    
82.2    
82.4    
82.5    
82.7    
82.9    
83.0    
83.2    
83.4    
83.6    
83.7    
83.9    
84.1    
84.3    
84.4    
84.6    
84.8    
84.9    
85.1    
85.3    
85.5    
85.6    
85.8    
86.0    
86.2    
86.3    
86.5    
86.7    
86.9    
87.0    
87.2    
87.4    
87.5    
87.7    
87.9    
88.1    
88.2    
88.4    
88.6    
88.8    
88.9    
89.1    
89.3    
89.4    
89.6    
89.8    
90.0    
90.1    
90.3    
90.5    
90.7    
90.8    
91.0    
91.2    
91.3    
91.5    
91.7    
91.9    
92.0    
92.2    
92.4    
92.6    
92.7    
92.9    
93.1    
93.3    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.5    
94.6    
94.8    
95.0    
95.2    
95.3    
95.5    
95.7    
95.8    
96.0    
96.2    
96.4    
96.5    
96.7    
96.9    
97.1    
97.2    
97.4    
97.6    
97.8    
97.9    
98.1    
98.3    
98.4    
98.6    
98.8    
99.0    
99.1    
99.3    
99.5    
99.7    
99.8    
-found 36 predictions from path traversal
Error with prediction: snap lend_intergenic: 157919, rend_intergenic: 149593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 35 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 10312
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support